# Assembly name: mHetGlaV3 # Organism name: Heterocephalus glaber (naked mole-rat) # Taxid: 10181 # BioSample: SAMEA14374018 # BioProject: PRJEB71899 # Submitter: The Hospital for Sick Children, Toronto # Date: 2024-09-07 # Assembly type: haploid # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: CAXVPI01 # Assembly method: TrioCanu, Flye, Scaff10x, Salsa2, 3dDNA, minimap, racon, medaka, freebayes, mitoVGP, Blast # Genome coverage: 38x # Sequencing technology: Oxford Nanopore long read WGS, Phased 10X-linked read WGS, Hi-C seq # GenBank assembly accession: GCA_964261345.1 # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_964261344.1 Primary Assembly ## GCA_964261346.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name chr1 assembled-molecule 1 Chromosome OZ179169.1 <> na Primary Assembly 134629806 na chr2 assembled-molecule 2 Chromosome OZ179170.1 <> na Primary Assembly 132745776 na chr3 assembled-molecule 3 Chromosome OZ179171.1 <> na Primary Assembly 126277954 na chr4 assembled-molecule 4 Chromosome OZ179172.1 <> na Primary Assembly 123766058 na chr5 assembled-molecule 5 Chromosome OZ179173.1 <> na Primary Assembly 120480493 na chr6 assembled-molecule 6 Chromosome OZ179174.1 <> na Primary Assembly 97502687 na chr7 assembled-molecule 7 Chromosome OZ179175.1 <> na Primary Assembly 102930227 na chr8 assembled-molecule 8 Chromosome OZ179176.1 <> na Primary Assembly 113318326 na chr9 assembled-molecule 9 Chromosome OZ179177.1 <> na Primary Assembly 97315161 na chr10 assembled-molecule 10 Chromosome OZ179178.1 <> na Primary Assembly 84909600 na chr11 assembled-molecule 11 Chromosome OZ179179.1 <> na Primary Assembly 101200384 na chr12 assembled-molecule 12 Chromosome OZ179180.1 <> na Primary Assembly 88899584 na chr13 assembled-molecule 13 Chromosome OZ179181.1 <> na Primary Assembly 88328929 na chr14 assembled-molecule 14 Chromosome OZ179182.1 <> na Primary Assembly 78119346 na chr15 assembled-molecule 15 Chromosome OZ179183.1 <> na Primary Assembly 76628187 na chr16 assembled-molecule 16 Chromosome OZ179184.1 <> na Primary Assembly 71916000 na chr17 assembled-molecule 17 Chromosome OZ179185.1 <> na Primary Assembly 76609446 na chr18 assembled-molecule 18 Chromosome OZ179186.1 <> na Primary Assembly 67149858 na chr19 assembled-molecule 19 Chromosome OZ179187.1 <> na Primary Assembly 61757644 na chr20 assembled-molecule 20 Chromosome OZ179188.1 <> na Primary Assembly 57522102 na chr21 assembled-molecule 21 Chromosome OZ179189.1 <> na Primary Assembly 61691956 na chr22 assembled-molecule 22 Chromosome OZ179190.1 <> na Primary Assembly 58236538 na chr23 assembled-molecule 23 Chromosome OZ179191.1 <> na Primary Assembly 54033349 na chr24 assembled-molecule 24 Chromosome OZ179192.1 <> na Primary Assembly 53093233 na chr25 assembled-molecule 25 Chromosome OZ179193.1 <> na Primary Assembly 48294688 na chr26 assembled-molecule 26 Chromosome OZ179194.1 <> na Primary Assembly 45276840 na chr27 assembled-molecule 27 Chromosome OZ179195.1 <> na Primary Assembly 38777485 na chr28 assembled-molecule 28 Chromosome OZ179196.1 <> na Primary Assembly 32257814 na chr29 assembled-molecule 29 Chromosome OZ179197.1 <> na Primary Assembly 22771000 na chrX assembled-molecule X Chromosome OZ179198.1 <> na Primary Assembly 145430243 na chrY_tig1 unplaced-scaffold na na CAXVPI010000001.1 <> na Primary Assembly 1127890 na chrY_tig2 unplaced-scaffold na na CAXVPI010000002.1 <> na Primary Assembly 50063 na chrY_tig3 unplaced-scaffold na na CAXVPI010000003.1 <> na Primary Assembly 50013 na chrY_tig4 unplaced-scaffold na na CAXVPI010000004.1 <> na Primary Assembly 32295 na chrY_tig5 unplaced-scaffold na na CAXVPI010000005.1 <> na Primary Assembly 29017 na chrY_tig6 unplaced-scaffold na na CAXVPI010000006.1 <> na Primary Assembly 25080 na chrY_tig7 unplaced-scaffold na na CAXVPI010000007.1 <> na Primary Assembly 25067 na chrY_tig8 unplaced-scaffold na na CAXVPI010000008.1 <> na Primary Assembly 25029 na chrY_tig9 unplaced-scaffold na na CAXVPI010000009.1 <> na Primary Assembly 25015 na chrY_tig10 unplaced-scaffold na na CAXVPI010000010.1 <> na Primary Assembly 25001 na chrY_tig11 unplaced-scaffold na na CAXVPI010000011.1 <> na Primary Assembly 24991 na chrY_tig12 unplaced-scaffold na na CAXVPI010000012.1 <> na Primary Assembly 24989 na chrY_tig13 unplaced-scaffold na na CAXVPI010000013.1 <> na Primary Assembly 12903 na chrY_tig14 unplaced-scaffold na na CAXVPI010000014.1 <> na Primary Assembly 11393 na mTig1 unplaced-scaffold na na CAXVPI010000015.1 <> na Primary Assembly 2258000 na mTig2 unplaced-scaffold na na CAXVPI010000016.1 <> na Primary Assembly 2502000 na mTig3 unplaced-scaffold na na CAXVPI010000017.1 <> na Primary Assembly 14000 na mTig4 unplaced-scaffold na na CAXVPI010000018.1 <> na Primary Assembly 1190000 na mTig5 unplaced-scaffold na na CAXVPI010000019.1 <> na Primary Assembly 393000 na mTig6 unplaced-scaffold na na CAXVPI010000020.1 <> na Primary Assembly 646000 na mTig7 unplaced-scaffold na na CAXVPI010000021.1 <> na Primary Assembly 29839 na mTig8 unplaced-scaffold na na CAXVPI010000022.1 <> na Primary Assembly 51000 na mTig9 unplaced-scaffold na na CAXVPI010000023.1 <> na Primary Assembly 23226 na mTig10 unplaced-scaffold na na CAXVPI010000024.1 <> na Primary Assembly 11774 na mTig11 unplaced-scaffold na na CAXVPI010000025.1 <> na Primary Assembly 286952 na mTig12 unplaced-scaffold na na CAXVPI010000026.1 <> na Primary Assembly 86562 na mTig13 unplaced-scaffold na na CAXVPI010000027.1 <> na Primary Assembly 62000 na mTig14 unplaced-scaffold na na CAXVPI010000028.1 <> na Primary Assembly 142000 na mTig15 unplaced-scaffold na na CAXVPI010000029.1 <> na Primary Assembly 449000 na mTig16 unplaced-scaffold na na CAXVPI010000030.1 <> na Primary Assembly 142672 na mTig17 unplaced-scaffold na na CAXVPI010000031.1 <> na Primary Assembly 173000 na mTig18 unplaced-scaffold na na CAXVPI010000032.1 <> na Primary Assembly 27000 na mTig19 unplaced-scaffold na na CAXVPI010000033.1 <> na Primary Assembly 71000 na mTig20 unplaced-scaffold na na CAXVPI010000034.1 <> na Primary Assembly 172000 na mTig21 unplaced-scaffold na na CAXVPI010000035.1 <> na Primary Assembly 96000 na mTig22 unplaced-scaffold na na CAXVPI010000036.1 <> na Primary Assembly 252000 na mTig23 unplaced-scaffold na na CAXVPI010000037.1 <> na Primary Assembly 797285 na mTig24 unplaced-scaffold na na CAXVPI010000038.1 <> na Primary Assembly 115000 na mTig25 unplaced-scaffold na na CAXVPI010000039.1 <> na Primary Assembly 25000 na mTig26 unplaced-scaffold na na CAXVPI010000040.1 <> na Primary Assembly 77000 na mTig27 unplaced-scaffold na na CAXVPI010000041.1 <> na Primary Assembly 150000 na mTig28 unplaced-scaffold na na CAXVPI010000042.1 <> na Primary Assembly 461000 na mTig29 unplaced-scaffold na na CAXVPI010000043.1 <> na Primary Assembly 475000 na mTig30 unplaced-scaffold na na CAXVPI010000044.1 <> na Primary Assembly 195000 na MT assembled-molecule MT Mitochondrion OZ179199.1 <> na non-nuclear 16428 na