# Assembly name: fScoMax1.1 # Organism name: Scophthalmus maximus (turbot) # Taxid: 52904 # BioSample: SAMEA110450106 # BioProject: PRJEB70830 # Submitter: WELLCOME SANGER INSTITUTE # Date: 2023-12-15 # Assembly type: haploid (principal pseudohaplotype of diploid) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: CAWLAM01 # Assembly method: various # Genome coverage: 41x # Sequencing technology: PacBio,Arima2 # GenBank assembly accession: GCA_963854745.1 # Linked assembly: GCA_963854755.1 (alternate pseudohaplotype of diploid) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_963854744.1 Primary Assembly ## GCA_963854746.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name SUPER_1 assembled-molecule 1 Chromosome OY978252.1 <> na Primary Assembly 33057255 na SUPER_2 assembled-molecule 2 Chromosome OY978253.1 <> na Primary Assembly 32031836 na SUPER_3 assembled-molecule 3 Chromosome OY978254.1 <> na Primary Assembly 31243763 na SUPER_4 assembled-molecule 4 Chromosome OY978255.1 <> na Primary Assembly 28765261 na SUPER_5 assembled-molecule 5 Chromosome OY978256.1 <> na Primary Assembly 27779498 na SUPER_6 assembled-molecule 6 Chromosome OY978257.1 <> na Primary Assembly 26785809 na SUPER_7 assembled-molecule 7 Chromosome OY978258.1 <> na Primary Assembly 26434517 na SUPER_8 assembled-molecule 8 Chromosome OY978259.1 <> na Primary Assembly 26296366 na SUPER_9 assembled-molecule 9 Chromosome OY978260.1 <> na Primary Assembly 26177324 na SUPER_10 assembled-molecule 10 Chromosome OY978261.1 <> na Primary Assembly 26138615 na SUPER_11 assembled-molecule 11 Chromosome OY978262.1 <> na Primary Assembly 26038851 na SUPER_12 assembled-molecule 12 Chromosome OY978263.1 <> na Primary Assembly 25642998 na SUPER_13 assembled-molecule 13 Chromosome OY978264.1 <> na Primary Assembly 25497409 na SUPER_14 assembled-molecule 14 Chromosome OY978265.1 <> na Primary Assembly 22907879 na SUPER_15 assembled-molecule 15 Chromosome OY978266.1 <> na Primary Assembly 22858603 na SUPER_16 assembled-molecule 16 Chromosome OY978267.1 <> na Primary Assembly 22629160 na SUPER_17 assembled-molecule 17 Chromosome OY978268.1 <> na Primary Assembly 22407620 na SUPER_18 assembled-molecule 18 Chromosome OY978269.1 <> na Primary Assembly 21591350 na SUPER_19 assembled-molecule 19 Chromosome OY978270.1 <> na Primary Assembly 21490357 na SUPER_20 assembled-molecule 20 Chromosome OY978271.1 <> na Primary Assembly 20778272 na SUPER_21 assembled-molecule 21 Chromosome OY978272.1 <> na Primary Assembly 16359164 na SUPER_22 assembled-molecule 22 Chromosome OY978273.1 <> na Primary Assembly 15795517 na SUPER_12_unloc_1 unlocalized-scaffold 12 Chromosome CAWLAM010000001.1 <> na Primary Assembly 40157 na SUPER_14_unloc_1 unlocalized-scaffold 14 Chromosome CAWLAM010000002.1 <> na Primary Assembly 29069 na SUPER_16_unloc_1 unlocalized-scaffold 16 Chromosome CAWLAM010000003.1 <> na Primary Assembly 46930 na SCAFFOLD_81 unplaced-scaffold na na CAWLAM010000004.1 <> na Primary Assembly 14425 na SCAFFOLD_95 unplaced-scaffold na na CAWLAM010000005.1 <> na Primary Assembly 6339 na SCAFFOLD_97 unplaced-scaffold na na CAWLAM010000006.1 <> na Primary Assembly 5000 na SCAFFOLD_82 unplaced-scaffold na na CAWLAM010000007.1 <> na Primary Assembly 14090 na SCAFFOLD_111 unplaced-scaffold na na CAWLAM010000008.1 <> na Primary Assembly 2000 na SCAFFOLD_121 unplaced-scaffold na na CAWLAM010000009.1 <> na Primary Assembly 1000 na SCAFFOLD_84 unplaced-scaffold na na CAWLAM010000010.1 <> na Primary Assembly 13827 na SCAFFOLD_100 unplaced-scaffold na na CAWLAM010000011.1 <> na Primary Assembly 3000 na SCAFFOLD_65 unplaced-scaffold na na CAWLAM010000012.1 <> na Primary Assembly 19331 na SCAFFOLD_49 unplaced-scaffold na na CAWLAM010000013.1 <> na Primary Assembly 30259 na SCAFFOLD_67 unplaced-scaffold na na CAWLAM010000014.1 <> na Primary Assembly 18562 na SCAFFOLD_126 unplaced-scaffold na na CAWLAM010000015.1 <> na Primary Assembly 1000 na SCAFFOLD_116 unplaced-scaffold na na CAWLAM010000016.1 <> na Primary Assembly 1000 na SCAFFOLD_75 unplaced-scaffold na na CAWLAM010000017.1 <> na Primary Assembly 16015 na SCAFFOLD_77 unplaced-scaffold na na CAWLAM010000018.1 <> na Primary Assembly 15797 na SCAFFOLD_48 unplaced-scaffold na na CAWLAM010000019.1 <> na Primary Assembly 31341 na SCAFFOLD_122 unplaced-scaffold na na CAWLAM010000020.1 <> na Primary Assembly 1000 na SCAFFOLD_112 unplaced-scaffold na na CAWLAM010000021.1 <> na Primary Assembly 1000 na SCAFFOLD_104 unplaced-scaffold na na CAWLAM010000022.1 <> na Primary Assembly 2000 na SCAFFOLD_28 unplaced-scaffold na na CAWLAM010000023.1 <> na Primary Assembly 90751 na SCAFFOLD_113 unplaced-scaffold na na CAWLAM010000024.1 <> na Primary Assembly 1000 na SCAFFOLD_123 unplaced-scaffold na na CAWLAM010000025.1 <> na Primary Assembly 1000 na SCAFFOLD_88 unplaced-scaffold na na CAWLAM010000026.1 <> na Primary Assembly 12227 na SCAFFOLD_86 unplaced-scaffold na na CAWLAM010000027.1 <> na Primary Assembly 12819 na SCAFFOLD_70 unplaced-scaffold na na CAWLAM010000028.1 <> na Primary Assembly 17261 na SCAFFOLD_109 unplaced-scaffold na na CAWLAM010000029.1 <> na Primary Assembly 2000 na SCAFFOLD_83 unplaced-scaffold na na CAWLAM010000030.1 <> na Primary Assembly 14070 na SCAFFOLD_55 unplaced-scaffold na na CAWLAM010000031.1 <> na Primary Assembly 25834 na SCAFFOLD_57 unplaced-scaffold na na CAWLAM010000032.1 <> na Primary Assembly 24735 na SCAFFOLD_44 unplaced-scaffold na na CAWLAM010000033.1 <> na Primary Assembly 35356 na SCAFFOLD_90 unplaced-scaffold na na CAWLAM010000034.1 <> na Primary Assembly 11043 na SCAFFOLD_30_1 unplaced-scaffold na na CAWLAM010000035.1 <> na Primary Assembly 36447 na SCAFFOLD_118 unplaced-scaffold na na CAWLAM010000036.1 <> na Primary Assembly 1000 na SCAFFOLD_128 unplaced-scaffold na na CAWLAM010000037.1 <> na Primary Assembly 1000 na SCAFFOLD_105 unplaced-scaffold na na CAWLAM010000038.1 <> na Primary Assembly 2000 na SCAFFOLD_60 unplaced-scaffold na na CAWLAM010000039.1 <> na Primary Assembly 23043 na SCAFFOLD_24 unplaced-scaffold na na CAWLAM010000040.1 <> na Primary Assembly 413759 na SCAFFOLD_89 unplaced-scaffold na na CAWLAM010000041.1 <> na Primary Assembly 12022 na SCAFFOLD_107 unplaced-scaffold na na CAWLAM010000042.1 <> na Primary Assembly 2000 na SCAFFOLD_125 unplaced-scaffold na na CAWLAM010000043.1 <> na Primary Assembly 1000 na SCAFFOLD_115 unplaced-scaffold na na CAWLAM010000044.1 <> na Primary Assembly 1000 na SCAFFOLD_62 unplaced-scaffold na na CAWLAM010000045.1 <> na Primary Assembly 21582 na SCAFFOLD_61 unplaced-scaffold na na CAWLAM010000046.1 <> na Primary Assembly 22597 na SCAFFOLD_127 unplaced-scaffold na na CAWLAM010000047.1 <> na Primary Assembly 1000 na SCAFFOLD_117 unplaced-scaffold na na CAWLAM010000048.1 <> na Primary Assembly 1000 na SCAFFOLD_59 unplaced-scaffold na na CAWLAM010000049.1 <> na Primary Assembly 23936 na SCAFFOLD_64 unplaced-scaffold na na CAWLAM010000050.1 <> na Primary Assembly 19410 na SCAFFOLD_87 unplaced-scaffold na na CAWLAM010000051.1 <> na Primary Assembly 12590 na SCAFFOLD_92 unplaced-scaffold na na CAWLAM010000052.1 <> na Primary Assembly 9837 na SCAFFOLD_91 unplaced-scaffold na na CAWLAM010000053.1 <> na Primary Assembly 9920 na SCAFFOLD_85 unplaced-scaffold na na CAWLAM010000054.1 <> na Primary Assembly 13294 na SCAFFOLD_40 unplaced-scaffold na na CAWLAM010000055.1 <> na Primary Assembly 36378 na SCAFFOLD_108 unplaced-scaffold na na CAWLAM010000056.1 <> na Primary Assembly 2000 na SCAFFOLD_94 unplaced-scaffold na na CAWLAM010000057.1 <> na Primary Assembly 8856 na SCAFFOLD_56 unplaced-scaffold na na CAWLAM010000058.1 <> na Primary Assembly 25675 na SCAFFOLD_74 unplaced-scaffold na na CAWLAM010000059.1 <> na Primary Assembly 16511 na SCAFFOLD_103 unplaced-scaffold na na CAWLAM010000060.1 <> na Primary Assembly 2000 na SCAFFOLD_119 unplaced-scaffold na na CAWLAM010000061.1 <> na Primary Assembly 1000 na SCAFFOLD_129 unplaced-scaffold na na CAWLAM010000062.1 <> na Primary Assembly 1000 na SCAFFOLD_71 unplaced-scaffold na na CAWLAM010000063.1 <> na Primary Assembly 17061 na SCAFFOLD_66 unplaced-scaffold na na CAWLAM010000064.1 <> na Primary Assembly 18972 na SCAFFOLD_68 unplaced-scaffold na na CAWLAM010000065.1 <> na Primary Assembly 17851 na SCAFFOLD_93 unplaced-scaffold na na CAWLAM010000066.1 <> na Primary Assembly 8985 na SCAFFOLD_124 unplaced-scaffold na na CAWLAM010000067.1 <> na Primary Assembly 1000 na SCAFFOLD_79 unplaced-scaffold na na CAWLAM010000068.1 <> na Primary Assembly 15446 na SCAFFOLD_114 unplaced-scaffold na na CAWLAM010000069.1 <> na Primary Assembly 1000 na SCAFFOLD_102 unplaced-scaffold na na CAWLAM010000070.1 <> na Primary Assembly 3000 na SCAFFOLD_96 unplaced-scaffold na na CAWLAM010000071.1 <> na Primary Assembly 5000 na SCAFFOLD_98 unplaced-scaffold na na CAWLAM010000072.1 <> na Primary Assembly 4000 na SCAFFOLD_63 unplaced-scaffold na na CAWLAM010000073.1 <> na Primary Assembly 21461 na SCAFFOLD_31 unplaced-scaffold na na CAWLAM010000074.1 <> na Primary Assembly 56000 na SCAFFOLD_73 unplaced-scaffold na na CAWLAM010000075.1 <> na Primary Assembly 16551 na SCAFFOLD_106 unplaced-scaffold na na CAWLAM010000076.1 <> na Primary Assembly 2000 na SCAFFOLD_99 unplaced-scaffold na na CAWLAM010000077.1 <> na Primary Assembly 3000 na SCAFFOLD_80 unplaced-scaffold na na CAWLAM010000078.1 <> na Primary Assembly 14794 na SCAFFOLD_52 unplaced-scaffold na na CAWLAM010000079.1 <> na Primary Assembly 27493 na SCAFFOLD_101 unplaced-scaffold na na CAWLAM010000080.1 <> na Primary Assembly 3000 na SCAFFOLD_120 unplaced-scaffold na na CAWLAM010000081.1 <> na Primary Assembly 1000 na SCAFFOLD_76 unplaced-scaffold na na CAWLAM010000082.1 <> na Primary Assembly 16011 na SCAFFOLD_110 unplaced-scaffold na na CAWLAM010000083.1 <> na Primary Assembly 2000 na SCAFFOLD_78 unplaced-scaffold na na CAWLAM010000084.1 <> na Primary Assembly 15649 na SCAFFOLD_69 unplaced-scaffold na na CAWLAM010000085.1 <> na Primary Assembly 17567 na scaffold_MT_1 assembled-molecule MT Mitochondrion OY978274.1 <> na non-nuclear 17729 na