# Assembly name: nxCaeAfra1.1 alternate haplotype # Organism name: Caenorhabditis afra (nematodes) # Taxid: 1094335 # BioSample: SAMEA8119419 # BioProject: PRJEB67488 # Submitter: WELLCOME SANGER INSTITUTE # Date: 2023-10-26 # Assembly type: alternate-pseudohaplotype # Release type: major # Assembly level: Contig # Genome representation: full # WGS project: CAUXXG01 # Assembly method: various # Genome coverage: 36x # Sequencing technology: PacBio,Arima2 # GenBank assembly accession: GCA_963570465.1 # Linked assembly: GCA_963570955.1 (principal pseudohaplotype of diploid) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_963570464.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name atg000006l_1 unplaced-scaffold na na CAUXXG010000001.1 <> na Primary Assembly 28673 na atg000007l_1 unplaced-scaffold na na CAUXXG010000002.1 <> na Primary Assembly 28542 na atg000017l_1 unplaced-scaffold na na CAUXXG010000003.1 <> na Primary Assembly 36522 na atg000020l_1 unplaced-scaffold na na CAUXXG010000004.1 <> na Primary Assembly 14401 na atg000022l_1 unplaced-scaffold na na CAUXXG010000005.1 <> na Primary Assembly 34752 na atg000025l_1 unplaced-scaffold na na CAUXXG010000006.1 <> na Primary Assembly 30360 na atg000027l_1 unplaced-scaffold na na CAUXXG010000007.1 <> na Primary Assembly 32946 na atg000028l_1 unplaced-scaffold na na CAUXXG010000008.1 <> na Primary Assembly 19937 na atg000033l_1 unplaced-scaffold na na CAUXXG010000009.1 <> na Primary Assembly 27088 na atg000041l_1 unplaced-scaffold na na CAUXXG010000010.1 <> na Primary Assembly 31559 na atg000047l_1 unplaced-scaffold na na CAUXXG010000011.1 <> na Primary Assembly 24750 na atg000051l_1 unplaced-scaffold na na CAUXXG010000012.1 <> na Primary Assembly 34207 na atg000052l_1 unplaced-scaffold na na CAUXXG010000013.1 <> na Primary Assembly 20059 na atg000054l_1 unplaced-scaffold na na CAUXXG010000014.1 <> na Primary Assembly 33661 na atg000056l_1 unplaced-scaffold na na CAUXXG010000015.1 <> na Primary Assembly 26949 na atg000057l_1 unplaced-scaffold na na CAUXXG010000016.1 <> na Primary Assembly 21915 na atg000058l_1 unplaced-scaffold na na CAUXXG010000017.1 <> na Primary Assembly 21637 na atg000060l_1 unplaced-scaffold na na CAUXXG010000018.1 <> na Primary Assembly 10707 na atg000062l_1 unplaced-scaffold na na CAUXXG010000019.1 <> na Primary Assembly 23119 na atg000064l_1 unplaced-scaffold na na CAUXXG010000020.1 <> na Primary Assembly 35496 na atg000066l_1 unplaced-scaffold na na CAUXXG010000021.1 <> na Primary Assembly 33304 na atg000068l_1 unplaced-scaffold na na CAUXXG010000022.1 <> na Primary Assembly 26207 na atg000069l_1 unplaced-scaffold na na CAUXXG010000023.1 <> na Primary Assembly 50277 na atg000071l_1 unplaced-scaffold na na CAUXXG010000024.1 <> na Primary Assembly 27375 na atg000072l_1 unplaced-scaffold na na CAUXXG010000025.1 <> na Primary Assembly 25507 na atg000075l_1 unplaced-scaffold na na CAUXXG010000026.1 <> na Primary Assembly 26090 na atg000079l_1 unplaced-scaffold na na CAUXXG010000027.1 <> na Primary Assembly 25014 na atg000081l_1 unplaced-scaffold na na CAUXXG010000028.1 <> na Primary Assembly 17721 na atg000082l_1 unplaced-scaffold na na CAUXXG010000029.1 <> na Primary Assembly 29487 na atg000084l_1 unplaced-scaffold na na CAUXXG010000030.1 <> na Primary Assembly 27968 na atg000088l_1 unplaced-scaffold na na CAUXXG010000031.1 <> na Primary Assembly 27642 na atg000089l_1 unplaced-scaffold na na CAUXXG010000032.1 <> na Primary Assembly 31877 na atg000090l_1 unplaced-scaffold na na CAUXXG010000033.1 <> na Primary Assembly 13604 na atg000093l_1 unplaced-scaffold na na CAUXXG010000034.1 <> na Primary Assembly 17611 na atg000096l_1 unplaced-scaffold na na CAUXXG010000035.1 <> na Primary Assembly 17509 na atg000097l_1 unplaced-scaffold na na CAUXXG010000036.1 <> na Primary Assembly 27445 na atg000099l_1 unplaced-scaffold na na CAUXXG010000037.1 <> na Primary Assembly 21769 na atg000100l_1 unplaced-scaffold na na CAUXXG010000038.1 <> na Primary Assembly 30065 na atg000102l_1 unplaced-scaffold na na CAUXXG010000039.1 <> na Primary Assembly 11742 na atg000104l_1 unplaced-scaffold na na CAUXXG010000040.1 <> na Primary Assembly 30700 na atg000106l_1 unplaced-scaffold na na CAUXXG010000041.1 <> na Primary Assembly 36206 na atg000107l_1 unplaced-scaffold na na CAUXXG010000042.1 <> na Primary Assembly 24539 na atg000111l_1 unplaced-scaffold na na CAUXXG010000043.1 <> na Primary Assembly 26863 na atg000114l_1 unplaced-scaffold na na CAUXXG010000044.1 <> na Primary Assembly 24088 na atg000115l_1 unplaced-scaffold na na CAUXXG010000045.1 <> na Primary Assembly 24474 na atg000118l_1 unplaced-scaffold na na CAUXXG010000046.1 <> na Primary Assembly 26205 na atg000119l_1 unplaced-scaffold na na CAUXXG010000047.1 <> na Primary Assembly 27252 na atg000122l_1 unplaced-scaffold na na CAUXXG010000048.1 <> na Primary Assembly 25870 na atg000124l_1 unplaced-scaffold na na CAUXXG010000049.1 <> na Primary Assembly 19362 na atg000126l_1 unplaced-scaffold na na CAUXXG010000050.1 <> na Primary Assembly 27984 na atg000127l_1 unplaced-scaffold na na CAUXXG010000051.1 <> na Primary Assembly 22821 na atg000128l_1 unplaced-scaffold na na CAUXXG010000052.1 <> na Primary Assembly 26342 na atg000129l_1 unplaced-scaffold na na CAUXXG010000053.1 <> na Primary Assembly 24489 na atg000130l_1 unplaced-scaffold na na CAUXXG010000054.1 <> na Primary Assembly 31512 na atg000132l_1 unplaced-scaffold na na CAUXXG010000055.1 <> na Primary Assembly 25681 na atg000134l_1 unplaced-scaffold na na CAUXXG010000056.1 <> na Primary Assembly 44672 na atg000135l_1 unplaced-scaffold na na CAUXXG010000057.1 <> na Primary Assembly 22169 na atg000137l_1 unplaced-scaffold na na CAUXXG010000058.1 <> na Primary Assembly 39344 na atg000138l_1 unplaced-scaffold na na CAUXXG010000059.1 <> na Primary Assembly 10576 na atg000139l_1 unplaced-scaffold na na CAUXXG010000060.1 <> na Primary Assembly 29401 na atg000141l_1 unplaced-scaffold na na CAUXXG010000061.1 <> na Primary Assembly 17932 na atg000142l_1 unplaced-scaffold na na CAUXXG010000062.1 <> na Primary Assembly 23363 na atg000143l_1 unplaced-scaffold na na CAUXXG010000063.1 <> na Primary Assembly 22264 na atg000144l_1 unplaced-scaffold na na CAUXXG010000064.1 <> na Primary Assembly 18572 na atg000146l_1 unplaced-scaffold na na CAUXXG010000065.1 <> na Primary Assembly 25759 na atg000147l_1 unplaced-scaffold na na CAUXXG010000066.1 <> na Primary Assembly 17030 na atg000148l_1 unplaced-scaffold na na CAUXXG010000067.1 <> na Primary Assembly 26513 na atg000150l_1 unplaced-scaffold na na CAUXXG010000068.1 <> na Primary Assembly 18737 na atg000151l_1 unplaced-scaffold na na CAUXXG010000069.1 <> na Primary Assembly 22777 na atg000153l_1 unplaced-scaffold na na CAUXXG010000070.1 <> na Primary Assembly 13955 na atg000155l_1 unplaced-scaffold na na CAUXXG010000071.1 <> na Primary Assembly 18144 na atg000157l_1 unplaced-scaffold na na CAUXXG010000072.1 <> na Primary Assembly 28725 na atg000158l_1 unplaced-scaffold na na CAUXXG010000073.1 <> na Primary Assembly 20893 na atg000162l_1 unplaced-scaffold na na CAUXXG010000074.1 <> na Primary Assembly 19236 na atg000163l_1 unplaced-scaffold na na CAUXXG010000075.1 <> na Primary Assembly 14776 na atg000164l_1 unplaced-scaffold na na CAUXXG010000076.1 <> na Primary Assembly 23691 na atg000166l_1 unplaced-scaffold na na CAUXXG010000077.1 <> na Primary Assembly 9121 na atg000169l_1 unplaced-scaffold na na CAUXXG010000078.1 <> na Primary Assembly 20521 na atg000170l_1 unplaced-scaffold na na CAUXXG010000079.1 <> na Primary Assembly 5585 na hap_ptg000023l_1_1 unplaced-scaffold na na CAUXXG010000080.1 <> na Primary Assembly 12638 na hap_ptg000046l_1_1 unplaced-scaffold na na CAUXXG010000081.1 <> na Primary Assembly 27142 na hap_ptg000051l_1_1 unplaced-scaffold na na CAUXXG010000082.1 <> na Primary Assembly 113898 na hap_ptg000058l_1_1 unplaced-scaffold na na CAUXXG010000083.1 <> na Primary Assembly 15898 na hap_ptg000062c_1_1 unplaced-scaffold na na CAUXXG010000084.1 <> na Primary Assembly 68860 na hap_ptg000071l_1_1 unplaced-scaffold na na CAUXXG010000085.1 <> na Primary Assembly 33438 na hap_ptg000075l_1_1 unplaced-scaffold na na CAUXXG010000086.1 <> na Primary Assembly 27876 na hap_ptg000076l_1_1 unplaced-scaffold na na CAUXXG010000087.1 <> na Primary Assembly 11552 na hap_ptg000079l_1_1 unplaced-scaffold na na CAUXXG010000088.1 <> na Primary Assembly 19994 na H_1 unplaced-scaffold na na CAUXXG010000089.1 <> na Primary Assembly 51932 na H_2 unplaced-scaffold na na CAUXXG010000090.1 <> na Primary Assembly 24359 na H_3 unplaced-scaffold na na CAUXXG010000091.1 <> na Primary Assembly 22147 na H_4 unplaced-scaffold na na CAUXXG010000092.1 <> na Primary Assembly 19310 na H_5 unplaced-scaffold na na CAUXXG010000093.1 <> na Primary Assembly 16761 na H_6 unplaced-scaffold na na CAUXXG010000094.1 <> na Primary Assembly 12500 na H_7 unplaced-scaffold na na CAUXXG010000095.1 <> na Primary Assembly 9400 na H_8 unplaced-scaffold na na CAUXXG010000096.1 <> na Primary Assembly 7050 na