# Assembly name: kaClaLepa1.1 # Organism name: Clavelina lepadiformis (light-bulb sea squirt) # Taxid: 159417 # BioSample: SAMEA7536527 # BioProject: PRJEB58329 # Submitter: WELLCOME SANGER INSTITUTE # Date: 2022-12-19 # Assembly type: haploid (principal pseudohaplotype of diploid) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: CANQJE01 # Assembly method: various # Genome coverage: 117x # Sequencing technology: PacBio,Illumina,Arima2 # RefSeq category: Representative Genome # GenBank assembly accession: GCA_947623445.1 # Linked assembly: GCA_947623165.1 (alternate pseudohaplotype of diploid) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_947623444.1 Primary Assembly ## GCA_947623446.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name SUPER_1 assembled-molecule 1 Chromosome OX392439.1 <> na Primary Assembly 28789166 na SUPER_2 assembled-molecule 2 Chromosome OX392440.1 <> na Primary Assembly 26535022 na SUPER_3 assembled-molecule 3 Chromosome OX392441.1 <> na Primary Assembly 25736969 na SUPER_4 assembled-molecule 4 Chromosome OX392442.1 <> na Primary Assembly 25070715 na SUPER_5 assembled-molecule 5 Chromosome OX392443.1 <> na Primary Assembly 24617235 na SUPER_6 assembled-molecule 6 Chromosome OX392444.1 <> na Primary Assembly 20771506 na SUPER_7 assembled-molecule 7 Chromosome OX392445.1 <> na Primary Assembly 20453238 na SUPER_8 assembled-molecule 8 Chromosome OX392446.1 <> na Primary Assembly 19509797 na SUPER_9 assembled-molecule 9 Chromosome OX392447.1 <> na Primary Assembly 15725681 na scaffold_139 unplaced-scaffold na na CANQJE010000001.1 <> na Primary Assembly 52008 na scaffold_214 unplaced-scaffold na na CANQJE010000002.1 <> na Primary Assembly 33749 na scaffold_281 unplaced-scaffold na na CANQJE010000003.1 <> na Primary Assembly 24886 na scaffold_351 unplaced-scaffold na na CANQJE010000004.1 <> na Primary Assembly 6055 na scaffold_190 unplaced-scaffold na na CANQJE010000005.1 <> na Primary Assembly 38945 na scaffold_117 unplaced-scaffold na na CANQJE010000006.1 <> na Primary Assembly 60896 na scaffold_209 unplaced-scaffold na na CANQJE010000007.1 <> na Primary Assembly 34647 na scaffold_283 unplaced-scaffold na na CANQJE010000008.1 <> na Primary Assembly 24445 na scaffold_353 unplaced-scaffold na na CANQJE010000009.1 <> na Primary Assembly 5722 na scaffold_282 unplaced-scaffold na na CANQJE010000010.1 <> na Primary Assembly 24541 na scaffold_352 unplaced-scaffold na na CANQJE010000011.1 <> na Primary Assembly 5962 na scaffold_358 unplaced-scaffold na na CANQJE010000012.1 <> na Primary Assembly 5277 na scaffold_227 unplaced-scaffold na na CANQJE010000013.1 <> na Primary Assembly 31943 na scaffold_124 unplaced-scaffold na na CANQJE010000014.1 <> na Primary Assembly 57784 na scaffold_325 unplaced-scaffold na na CANQJE010000015.1 <> na Primary Assembly 14037 na scaffold_212 unplaced-scaffold na na CANQJE010000016.1 <> na Primary Assembly 34238 na scaffold_347 unplaced-scaffold na na CANQJE010000017.1 <> na Primary Assembly 6930 na scaffold_123 unplaced-scaffold na na CANQJE010000018.1 <> na Primary Assembly 57820 na scaffold_363 unplaced-scaffold na na CANQJE010000019.1 <> na Primary Assembly 2000 na scaffold_250 unplaced-scaffold na na CANQJE010000020.1 <> na Primary Assembly 29399 na scaffold_279 unplaced-scaffold na na CANQJE010000021.1 <> na Primary Assembly 24962 na scaffold_368 unplaced-scaffold na na CANQJE010000022.1 <> na Primary Assembly 1000 na scaffold_187 unplaced-scaffold na na CANQJE010000023.1 <> na Primary Assembly 39447 na scaffold_356 unplaced-scaffold na na CANQJE010000024.1 <> na Primary Assembly 5667 na scaffold_354 unplaced-scaffold na na CANQJE010000025.1 <> na Primary Assembly 5682 na scaffold_284 unplaced-scaffold na na CANQJE010000026.1 <> na Primary Assembly 24293 na scaffold_365 unplaced-scaffold na na CANQJE010000027.1 <> na Primary Assembly 2000 na scaffold_246 unplaced-scaffold na na CANQJE010000028.1 <> na Primary Assembly 30054 na scaffold_273 unplaced-scaffold na na CANQJE010000029.1 <> na Primary Assembly 26430 na scaffold_300 unplaced-scaffold na na CANQJE010000030.1 <> na Primary Assembly 21939 na scaffold_237 unplaced-scaffold na na CANQJE010000031.1 <> na Primary Assembly 30727 na scaffold_163 unplaced-scaffold na na CANQJE010000032.1 <> na Primary Assembly 45517 na scaffold_154 unplaced-scaffold na na CANQJE010000033.1 <> na Primary Assembly 47050 na scaffold_204 unplaced-scaffold na na CANQJE010000034.1 <> na Primary Assembly 35307 na scaffold_201 unplaced-scaffold na na CANQJE010000035.1 <> na Primary Assembly 36044 na scaffold_243 unplaced-scaffold na na CANQJE010000036.1 <> na Primary Assembly 30532 na scaffold_355 unplaced-scaffold na na CANQJE010000037.1 <> na Primary Assembly 5672 na scaffold_339 unplaced-scaffold na na CANQJE010000038.1 <> na Primary Assembly 8864 na scaffold_177 unplaced-scaffold na na CANQJE010000039.1 <> na Primary Assembly 42074 na scaffold_248 unplaced-scaffold na na CANQJE010000040.1 <> na Primary Assembly 29740 na scaffold_335 unplaced-scaffold na na CANQJE010000041.1 <> na Primary Assembly 10939 na scaffold_289 unplaced-scaffold na na CANQJE010000042.1 <> na Primary Assembly 23755 na scaffold_359 unplaced-scaffold na na CANQJE010000043.1 <> na Primary Assembly 5218 na scaffold_370 unplaced-scaffold na na CANQJE010000044.1 <> na Primary Assembly 1000 na scaffold_203 unplaced-scaffold na na CANQJE010000045.1 <> na Primary Assembly 35803 na scaffold_152 unplaced-scaffold na na CANQJE010000046.1 <> na Primary Assembly 47584 na scaffold_220 unplaced-scaffold na na CANQJE010000047.1 <> na Primary Assembly 32745 na scaffold_132 unplaced-scaffold na na CANQJE010000048.1 <> na Primary Assembly 55908 na scaffold_133 unplaced-scaffold na na CANQJE010000049.1 <> na Primary Assembly 55090 na scaffold_166 unplaced-scaffold na na CANQJE010000050.1 <> na Primary Assembly 44728 na scaffold_84 unplaced-scaffold na na CANQJE010000051.1 <> na Primary Assembly 84502 na scaffold_145 unplaced-scaffold na na CANQJE010000052.1 <> na Primary Assembly 50225 na scaffold_301 unplaced-scaffold na na CANQJE010000053.1 <> na Primary Assembly 21559 na scaffold_217 unplaced-scaffold na na CANQJE010000054.1 <> na Primary Assembly 33585 na scaffold_181 unplaced-scaffold na na CANQJE010000055.1 <> na Primary Assembly 41694 na scaffold_114 unplaced-scaffold na na CANQJE010000056.1 <> na Primary Assembly 62000 na scaffold_175 unplaced-scaffold na na CANQJE010000057.1 <> na Primary Assembly 42612 na scaffold_186 unplaced-scaffold na na CANQJE010000058.1 <> na Primary Assembly 39993 na scaffold_287 unplaced-scaffold na na CANQJE010000059.1 <> na Primary Assembly 23778 na scaffold_199 unplaced-scaffold na na CANQJE010000060.1 <> na Primary Assembly 36136 na scaffold_357 unplaced-scaffold na na CANQJE010000061.1 <> na Primary Assembly 5627 na scaffold_304 unplaced-scaffold na na CANQJE010000062.1 <> na Primary Assembly 21239 na scaffold_222 unplaced-scaffold na na CANQJE010000063.1 <> na Primary Assembly 32627 na scaffold_195 unplaced-scaffold na na CANQJE010000064.1 <> na Primary Assembly 36639 na scaffold_337 unplaced-scaffold na na CANQJE010000065.1 <> na Primary Assembly 10173 na scaffold_179 unplaced-scaffold na na CANQJE010000066.1 <> na Primary Assembly 41905 na scaffold_346 unplaced-scaffold na na CANQJE010000067.1 <> na Primary Assembly 7454 na scaffold_373 unplaced-scaffold na na CANQJE010000068.1 <> na Primary Assembly 1000 na scaffold_240 unplaced-scaffold na na CANQJE010000069.1 <> na Primary Assembly 30586 na scaffold_171 unplaced-scaffold na na CANQJE010000070.1 <> na Primary Assembly 43379 na scaffold_236 unplaced-scaffold na na CANQJE010000071.1 <> na Primary Assembly 30834 na scaffold_350 unplaced-scaffold na na CANQJE010000072.1 <> na Primary Assembly 6516 na scaffold_263 unplaced-scaffold na na CANQJE010000073.1 <> na Primary Assembly 27713 na scaffold_191 unplaced-scaffold na na CANQJE010000074.1 <> na Primary Assembly 38234 na scaffold_229 unplaced-scaffold na na CANQJE010000075.1 <> na Primary Assembly 31894 na scaffold_313 unplaced-scaffold na na CANQJE010000076.1 <> na Primary Assembly 19075 na scaffold_172 unplaced-scaffold na na CANQJE010000077.1 <> na Primary Assembly 43270 na scaffold_193 unplaced-scaffold na na CANQJE010000078.1 <> na Primary Assembly 37916 na scaffold_94 unplaced-scaffold na na CANQJE010000079.1 <> na Primary Assembly 77000 na scaffold_192 unplaced-scaffold na na CANQJE010000080.1 <> na Primary Assembly 38049 na scaffold_198 unplaced-scaffold na na CANQJE010000081.1 <> na Primary Assembly 36189 na scaffold_238 unplaced-scaffold na na CANQJE010000082.1 <> na Primary Assembly 30657 na scaffold_345 unplaced-scaffold na na CANQJE010000083.1 <> na Primary Assembly 7488 na scaffold_253 unplaced-scaffold na na CANQJE010000084.1 <> na Primary Assembly 28996 na scaffold_141 unplaced-scaffold na na CANQJE010000085.1 <> na Primary Assembly 51699 na scaffold_97 unplaced-scaffold na na CANQJE010000086.1 <> na Primary Assembly 75164 na scaffold_231 unplaced-scaffold na na CANQJE010000087.1 <> na Primary Assembly 31822 na scaffold_194 unplaced-scaffold na na CANQJE010000088.1 <> na Primary Assembly 36676 na scaffold_305 unplaced-scaffold na na CANQJE010000089.1 <> na Primary Assembly 20777 na scaffold_277 unplaced-scaffold na na CANQJE010000090.1 <> na Primary Assembly 25679 na scaffold_142 unplaced-scaffold na na CANQJE010000091.1 <> na Primary Assembly 51672 na scaffold_174 unplaced-scaffold na na CANQJE010000092.1 <> na Primary Assembly 42683 na scaffold_143 unplaced-scaffold na na CANQJE010000093.1 <> na Primary Assembly 51626 na scaffold_MT_1 assembled-molecule MT Mitochondrion OX392448.1 <> na non-nuclear 14478 na