# Assembly name: AKR_J_v3 # Organism name: Mus musculus (house mouse) # Taxid: 10090 # BioSample: SAMEA9544180 # BioProject: PRJEB47108 # Submitter: EMBL-EBI, WELLCOME TRUST GENOME CAMPUS, CAMBRIDGE # Date: 2022-07-01 # Assembly type: haploid # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: CAKLHW02 # Genome coverage: 40x # Excluded from RefSeq: genome length too small # GenBank assembly accession: GCA_922000895.2 # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_922000894.2 Primary Assembly ## GCA_922000896.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name AKR_J#1#chr1 assembled-molecule 1 Chromosome OW971594.1 <> na Primary Assembly 191687118 na AKR_J#1#chr2 assembled-molecule 2 Chromosome OW971595.1 <> na Primary Assembly 175581515 na AKR_J#1#chr3 assembled-molecule 3 Chromosome OW971596.1 <> na Primary Assembly 155188721 na AKR_J#1#chr4 assembled-molecule 4 Chromosome OW971597.1 <> na Primary Assembly 148812320 na AKR_J#1#chr5 assembled-molecule 5 Chromosome OW971598.1 <> na Primary Assembly 144115604 na AKR_J#1#chr6 assembled-molecule 6 Chromosome OW971599.1 <> na Primary Assembly 144187622 na AKR_J#1#chr7 assembled-molecule 7 Chromosome OW971601.1 <> na Primary Assembly 129427551 na AKR_J#1#chr8 assembled-molecule 8 Chromosome OW971603.1 <> na Primary Assembly 124772877 na AKR_J#1#chr9 assembled-molecule 9 Chromosome OW971604.1 <> na Primary Assembly 120984932 na AKR_J#1#chr10 assembled-molecule 10 Chromosome OW971602.1 <> na Primary Assembly 126857991 na AKR_J#1#chr11 assembled-molecule 11 Chromosome OW971605.1 <> na Primary Assembly 119064021 na AKR_J#1#chr12 assembled-molecule 12 Chromosome OW971608.1 <> na Primary Assembly 112168841 na AKR_J#1#chr13 assembled-molecule 13 Chromosome OW971606.1 <> na Primary Assembly 113629106 na AKR_J#1#chr14 assembled-molecule 14 Chromosome OW971607.1 <> na Primary Assembly 113404824 na AKR_J#1#chr15 assembled-molecule 15 Chromosome OW971609.1 <> na Primary Assembly 100754966 na AKR_J#1#chr16 assembled-molecule 16 Chromosome OW971610.1 <> na Primary Assembly 94865630 na AKR_J#1#chr17 assembled-molecule 17 Chromosome OW971611.1 <> na Primary Assembly 90848440 na AKR_J#1#chr18 assembled-molecule 18 Chromosome OW971612.1 <> na Primary Assembly 87845016 na AKR_J#1#chr19 assembled-molecule 19 Chromosome OW971613.1 <> na Primary Assembly 57899023 na AKR_J#1#chrX assembled-molecule X Chromosome OW971600.1 <> na Primary Assembly 142574728 na AKR_J#1#chr5_unloc_1 unplaced-scaffold na na CAKLHW020000001.1 <> na Primary Assembly 247923 na AKR_J#1#chr7_unloc_1 unplaced-scaffold na na CAKLHW020000002.1 <> na Primary Assembly 319279 na AKR_J#1#chr7_unloc_2 unplaced-scaffold na na CAKLHW020000003.1 <> na Primary Assembly 307711 na AKR_J#1#chr7_unloc_3 unplaced-scaffold na na CAKLHW020000004.1 <> na Primary Assembly 153075 na AKR_J#1#189 unplaced-scaffold na na CAKLHW020000005.1 <> na Primary Assembly 10990 na AKR_J#1#137 unplaced-scaffold na na CAKLHW020000006.1 <> na Primary Assembly 11398 na AKR_J#1#140 unplaced-scaffold na na CAKLHW020000007.1 <> na Primary Assembly 88982 na AKR_J#1#99 unplaced-scaffold na na CAKLHW020000008.1 <> na Primary Assembly 14747 na AKR_J#1#29 unplaced-scaffold na na CAKLHW020000009.1 <> na Primary Assembly 61400 na AKR_J#1#50 unplaced-scaffold na na CAKLHW020000010.1 <> na Primary Assembly 31951 na AKR_J#1#154 unplaced-scaffold na na CAKLHW020000011.1 <> na Primary Assembly 33456 na AKR_J#1#211 unplaced-scaffold na na CAKLHW020000012.1 <> na Primary Assembly 87631 na AKR_J#1#70 unplaced-scaffold na na CAKLHW020000013.1 <> na Primary Assembly 51641 na AKR_J#1#98 unplaced-scaffold na na CAKLHW020000014.1 <> na Primary Assembly 60177 na AKR_J#1#199 unplaced-scaffold na na CAKLHW020000015.1 <> na Primary Assembly 52033 na AKR_J#1#61 unplaced-scaffold na na CAKLHW020000016.1 <> na Primary Assembly 11738 na AKR_J#1#28 unplaced-scaffold na na CAKLHW020000017.1 <> na Primary Assembly 16983 na AKR_J#1#178 unplaced-scaffold na na CAKLHW020000018.1 <> na Primary Assembly 21875 na AKR_J#1#207 unplaced-scaffold na na CAKLHW020000019.1 <> na Primary Assembly 37707 na AKR_J#1#215 unplaced-scaffold na na CAKLHW020000020.1 <> na Primary Assembly 19609 na AKR_J#1#103 unplaced-scaffold na na CAKLHW020000021.1 <> na Primary Assembly 53378 na AKR_J#1#182 unplaced-scaffold na na CAKLHW020000022.1 <> na Primary Assembly 13487 na AKR_J#1#161 unplaced-scaffold na na CAKLHW020000023.1 <> na Primary Assembly 39846 na AKR_J#1#86 unplaced-scaffold na na CAKLHW020000024.1 <> na Primary Assembly 13768 na AKR_J#1#64 unplaced-scaffold na na CAKLHW020000025.1 <> na Primary Assembly 14639 na AKR_J#1#165 unplaced-scaffold na na CAKLHW020000026.1 <> na Primary Assembly 22897 na AKR_J#1#192 unplaced-scaffold na na CAKLHW020000027.1 <> na Primary Assembly 44981 na AKR_J#1#40 unplaced-scaffold na na CAKLHW020000028.1 <> na Primary Assembly 40042 na AKR_J#1#124 unplaced-scaffold na na CAKLHW020000029.1 <> na Primary Assembly 27512 na AKR_J#1#183 unplaced-scaffold na na CAKLHW020000030.1 <> na Primary Assembly 16089 na AKR_J#1#49 unplaced-scaffold na na CAKLHW020000031.1 <> na Primary Assembly 98350 na AKR_J#1#102 unplaced-scaffold na na CAKLHW020000032.1 <> na Primary Assembly 39656 na AKR_J#1#193 unplaced-scaffold na na CAKLHW020000033.1 <> na Primary Assembly 15044 na AKR_J#1#127 unplaced-scaffold na na CAKLHW020000034.1 <> na Primary Assembly 12958 na AKR_J#1#146 unplaced-scaffold na na CAKLHW020000035.1 <> na Primary Assembly 10512 na AKR_J#1#48 unplaced-scaffold na na CAKLHW020000036.1 <> na Primary Assembly 144731 na AKR_J#1#31 unplaced-scaffold na na CAKLHW020000037.1 <> na Primary Assembly 31066 na AKR_J#1#109 unplaced-scaffold na na CAKLHW020000038.1 <> na Primary Assembly 141481 na AKR_J#1#87 unplaced-scaffold na na CAKLHW020000039.1 <> na Primary Assembly 24241 na AKR_J#1#78 unplaced-scaffold na na CAKLHW020000040.1 <> na Primary Assembly 28233 na AKR_J#1#157 unplaced-scaffold na na CAKLHW020000041.1 <> na Primary Assembly 10973 na AKR_J#1#58 unplaced-scaffold na na CAKLHW020000042.1 <> na Primary Assembly 22443 na AKR_J#1#175 unplaced-scaffold na na CAKLHW020000043.1 <> na Primary Assembly 57967 na AKR_J#1#90 unplaced-scaffold na na CAKLHW020000044.1 <> na Primary Assembly 18419 na AKR_J#1#218 unplaced-scaffold na na CAKLHW020000045.1 <> na Primary Assembly 23031 na AKR_J#1#79 unplaced-scaffold na na CAKLHW020000046.1 <> na Primary Assembly 20758 na AKR_J#1#204 unplaced-scaffold na na CAKLHW020000047.1 <> na Primary Assembly 18559 na AKR_J#1#44 unplaced-scaffold na na CAKLHW020000048.1 <> na Primary Assembly 14540 na AKR_J#1#158 unplaced-scaffold na na CAKLHW020000049.1 <> na Primary Assembly 64039 na AKR_J#1#38 unplaced-scaffold na na CAKLHW020000050.1 <> na Primary Assembly 16142 na AKR_J#1#135 unplaced-scaffold na na CAKLHW020000051.1 <> na Primary Assembly 19069 na AKR_J#1#71 unplaced-scaffold na na CAKLHW020000052.1 <> na Primary Assembly 42473 na AKR_J#1#201 unplaced-scaffold na na CAKLHW020000053.1 <> na Primary Assembly 51436 na AKR_J#1#83 unplaced-scaffold na na CAKLHW020000054.1 <> na Primary Assembly 50374 na AKR_J#1#39 unplaced-scaffold na na CAKLHW020000055.1 <> na Primary Assembly 101549 na AKR_J#1#131 unplaced-scaffold na na CAKLHW020000056.1 <> na Primary Assembly 64314 na AKR_J#1#174 unplaced-scaffold na na CAKLHW020000057.1 <> na Primary Assembly 12005 na AKR_J#1#196 unplaced-scaffold na na CAKLHW020000058.1 <> na Primary Assembly 21019 na AKR_J#1#205 unplaced-scaffold na na CAKLHW020000059.1 <> na Primary Assembly 14726 na AKR_J#1#217 unplaced-scaffold na na CAKLHW020000060.1 <> na Primary Assembly 10214 na AKR_J#1#143 unplaced-scaffold na na CAKLHW020000061.1 <> na Primary Assembly 12946 na AKR_J#1#113 unplaced-scaffold na na CAKLHW020000062.1 <> na Primary Assembly 21916 na AKR_J#1#54 unplaced-scaffold na na CAKLHW020000063.1 <> na Primary Assembly 42758 na AKR_J#1#41 unplaced-scaffold na na CAKLHW020000064.1 <> na Primary Assembly 56318 na AKR_J#1#167 unplaced-scaffold na na CAKLHW020000065.1 <> na Primary Assembly 15905 na AKR_J#1#100 unplaced-scaffold na na CAKLHW020000066.1 <> na Primary Assembly 44251 na AKR_J#1#112 unplaced-scaffold na na CAKLHW020000067.1 <> na Primary Assembly 38692 na AKR_J#1#121 unplaced-scaffold na na CAKLHW020000068.1 <> na Primary Assembly 10544 na AKR_J#1#94 unplaced-scaffold na na CAKLHW020000069.1 <> na Primary Assembly 100304 na AKR_J#1#190 unplaced-scaffold na na CAKLHW020000070.1 <> na Primary Assembly 23181 na AKR_J#1#82 unplaced-scaffold na na CAKLHW020000071.1 <> na Primary Assembly 27609 na AKR_J#1#24 unplaced-scaffold na na CAKLHW020000072.1 <> na Primary Assembly 102982 na AKR_J#1#180 unplaced-scaffold na na CAKLHW020000073.1 <> na Primary Assembly 80660 na AKR_J#1#149 unplaced-scaffold na na CAKLHW020000074.1 <> na Primary Assembly 59725 na AKR_J#1#164 unplaced-scaffold na na CAKLHW020000075.1 <> na Primary Assembly 40259 na AKR_J#1#125 unplaced-scaffold na na CAKLHW020000076.1 <> na Primary Assembly 57158 na AKR_J#1#119 unplaced-scaffold na na CAKLHW020000077.1 <> na Primary Assembly 37076 na AKR_J#1#30 unplaced-scaffold na na CAKLHW020000078.1 <> na Primary Assembly 72974 na AKR_J#1#106 unplaced-scaffold na na CAKLHW020000079.1 <> na Primary Assembly 10115 na AKR_J#1#155 unplaced-scaffold na na CAKLHW020000080.1 <> na Primary Assembly 18830 na AKR_J#1#138 unplaced-scaffold na na CAKLHW020000081.1 <> na Primary Assembly 30915 na AKR_J#1#68 unplaced-scaffold na na CAKLHW020000082.1 <> na Primary Assembly 29746 na AKR_J#1#220 unplaced-scaffold na na CAKLHW020000083.1 <> na Primary Assembly 88302 na AKR_J#1#214 unplaced-scaffold na na CAKLHW020000084.1 <> na Primary Assembly 12547 na AKR_J#1#85 unplaced-scaffold na na CAKLHW020000085.1 <> na Primary Assembly 19717 na AKR_J#1#151 unplaced-scaffold na na CAKLHW020000086.1 <> na Primary Assembly 29460 na AKR_J#1#93 unplaced-scaffold na na CAKLHW020000087.1 <> na Primary Assembly 34764 na AKR_J#1#197 unplaced-scaffold na na CAKLHW020000088.1 <> na Primary Assembly 16264 na AKR_J#1#23 unplaced-scaffold na na CAKLHW020000089.1 <> na Primary Assembly 32626 na AKR_J#1#216 unplaced-scaffold na na CAKLHW020000090.1 <> na Primary Assembly 22982 na AKR_J#1#123 unplaced-scaffold na na CAKLHW020000091.1 <> na Primary Assembly 105308 na AKR_J#1#104 unplaced-scaffold na na CAKLHW020000092.1 <> na Primary Assembly 18784 na AKR_J#1#187 unplaced-scaffold na na CAKLHW020000093.1 <> na Primary Assembly 35116 na AKR_J#1#55 unplaced-scaffold na na CAKLHW020000094.1 <> na Primary Assembly 28916 na AKR_J#1#67 unplaced-scaffold na na CAKLHW020000095.1 <> na Primary Assembly 173033 na AKR_J#1#139 unplaced-scaffold na na CAKLHW020000096.1 <> na Primary Assembly 15699 na AKR_J#1#42 unplaced-scaffold na na CAKLHW020000097.1 <> na Primary Assembly 13460 na AKR_J#1#75 unplaced-scaffold na na CAKLHW020000098.1 <> na Primary Assembly 30553 na AKR_J#1#118 unplaced-scaffold na na CAKLHW020000099.1 <> na Primary Assembly 37763 na AKR_J#1#72 unplaced-scaffold na na CAKLHW020000100.1 <> na Primary Assembly 24107 na AKR_J#1#45 unplaced-scaffold na na CAKLHW020000101.1 <> na Primary Assembly 14423 na AKR_J#1#202 unplaced-scaffold na na CAKLHW020000102.1 <> na Primary Assembly 14456 na AKR_J#1#52 unplaced-scaffold na na CAKLHW020000103.1 <> na Primary Assembly 60393 na AKR_J#1#148 unplaced-scaffold na na CAKLHW020000104.1 <> na Primary Assembly 74536 na AKR_J#1#166 unplaced-scaffold na na CAKLHW020000105.1 <> na Primary Assembly 12094 na AKR_J#1#153 unplaced-scaffold na na CAKLHW020000106.1 <> na Primary Assembly 25440 na AKR_J#1#132 unplaced-scaffold na na CAKLHW020000107.1 <> na Primary Assembly 24737 na AKR_J#1#129 unplaced-scaffold na na CAKLHW020000108.1 <> na Primary Assembly 37864 na AKR_J#1#43 unplaced-scaffold na na CAKLHW020000109.1 <> na Primary Assembly 32974 na AKR_J#1#203 unplaced-scaffold na na CAKLHW020000110.1 <> na Primary Assembly 28797 na AKR_J#1#145 unplaced-scaffold na na CAKLHW020000111.1 <> na Primary Assembly 71290 na AKR_J#1#133 unplaced-scaffold na na CAKLHW020000112.1 <> na Primary Assembly 33591 na AKR_J#1#152 unplaced-scaffold na na CAKLHW020000113.1 <> na Primary Assembly 24805 na AKR_J#1#66 unplaced-scaffold na na CAKLHW020000114.1 <> na Primary Assembly 11378 na AKR_J#1#84 unplaced-scaffold na na CAKLHW020000115.1 <> na Primary Assembly 47614 na AKR_J#1#92 unplaced-scaffold na na CAKLHW020000116.1 <> na Primary Assembly 21714 na AKR_J#1#141 unplaced-scaffold na na CAKLHW020000117.1 <> na Primary Assembly 112053 na AKR_J#1#22 unplaced-scaffold na na CAKLHW020000118.1 <> na Primary Assembly 113684 na AKR_J#1#122 unplaced-scaffold na na CAKLHW020000119.1 <> na Primary Assembly 10771 na AKR_J#1#111 unplaced-scaffold na na CAKLHW020000120.1 <> na Primary Assembly 16696 na AKR_J#1#176 unplaced-scaffold na na CAKLHW020000121.1 <> na Primary Assembly 26994 na AKR_J#1#194 unplaced-scaffold na na CAKLHW020000122.1 <> na Primary Assembly 14658 na AKR_J#1#37 unplaced-scaffold na na CAKLHW020000123.1 <> na Primary Assembly 17202 na AKR_J#1#95 unplaced-scaffold na na CAKLHW020000124.1 <> na Primary Assembly 25256 na AKR_J#1#160 unplaced-scaffold na na CAKLHW020000125.1 <> na Primary Assembly 18820 na AKR_J#1#184 unplaced-scaffold na na CAKLHW020000126.1 <> na Primary Assembly 29252 na AKR_J#1#107 unplaced-scaffold na na CAKLHW020000127.1 <> na Primary Assembly 18264 na AKR_J#1#73 unplaced-scaffold na na CAKLHW020000128.1 <> na Primary Assembly 106234 na AKR_J#1#53 unplaced-scaffold na na CAKLHW020000129.1 <> na Primary Assembly 28276 na AKR_J#1#159 unplaced-scaffold na na CAKLHW020000130.1 <> na Primary Assembly 73075 na AKR_J#1#181 unplaced-scaffold na na CAKLHW020000131.1 <> na Primary Assembly 22852 na AKR_J#1#88 unplaced-scaffold na na CAKLHW020000132.1 <> na Primary Assembly 12195 na AKR_J#1#162 unplaced-scaffold na na CAKLHW020000133.1 <> na Primary Assembly 22743 na AKR_J#1#195 unplaced-scaffold na na CAKLHW020000134.1 <> na Primary Assembly 10120 na AKR_J#1#219 unplaced-scaffold na na CAKLHW020000135.1 <> na Primary Assembly 65466 na AKR_J#1#57 unplaced-scaffold na na CAKLHW020000136.1 <> na Primary Assembly 35000 na AKR_J#1#65 unplaced-scaffold na na CAKLHW020000137.1 <> na Primary Assembly 26440 na AKR_J#1#206 unplaced-scaffold na na CAKLHW020000138.1 <> na Primary Assembly 60543 na AKR_J#1#77 unplaced-scaffold na na CAKLHW020000139.1 <> na Primary Assembly 14936 na AKR_J#1#120 unplaced-scaffold na na CAKLHW020000140.1 <> na Primary Assembly 133626 na AKR_J#1#89 unplaced-scaffold na na CAKLHW020000141.1 <> na Primary Assembly 28967 na AKR_J#1#136 unplaced-scaffold na na CAKLHW020000142.1 <> na Primary Assembly 14213 na AKR_J#1#114 unplaced-scaffold na na CAKLHW020000143.1 <> na Primary Assembly 165789 na AKR_J#1#108 unplaced-scaffold na na CAKLHW020000144.1 <> na Primary Assembly 131118 na AKR_J#1#173 unplaced-scaffold na na CAKLHW020000145.1 <> na Primary Assembly 82910 na AKR_J#1#221 unplaced-scaffold na na CAKLHW020000146.1 <> na Primary Assembly 52823 na AKR_J#1#150 unplaced-scaffold na na CAKLHW020000147.1 <> na Primary Assembly 39327 na AKR_J#1#144 unplaced-scaffold na na CAKLHW020000148.1 <> na Primary Assembly 70809 na AKR_J#1#169 unplaced-scaffold na na CAKLHW020000149.1 <> na Primary Assembly 10195 na AKR_J#1#26 unplaced-scaffold na na CAKLHW020000150.1 <> na Primary Assembly 26404 na AKR_J#1#62 unplaced-scaffold na na CAKLHW020000151.1 <> na Primary Assembly 43554 na AKR_J#1#96 unplaced-scaffold na na CAKLHW020000152.1 <> na Primary Assembly 24223 na AKR_J#1#47 unplaced-scaffold na na CAKLHW020000153.1 <> na Primary Assembly 54503 na AKR_J#1#56 unplaced-scaffold na na CAKLHW020000154.1 <> na Primary Assembly 85312 na AKR_J#1#76 unplaced-scaffold na na CAKLHW020000155.1 <> na Primary Assembly 13790 na AKR_J#1#126 unplaced-scaffold na na CAKLHW020000156.1 <> na Primary Assembly 23895 na AKR_J#1#32 unplaced-scaffold na na CAKLHW020000157.1 <> na Primary Assembly 36996 na AKR_J#1#130 unplaced-scaffold na na CAKLHW020000158.1 <> na Primary Assembly 18857 na AKR_J#1#172 unplaced-scaffold na na CAKLHW020000159.1 <> na Primary Assembly 11522 na AKR_J#1#213 unplaced-scaffold na na CAKLHW020000160.1 <> na Primary Assembly 51795 na AKR_J#1#200 unplaced-scaffold na na CAKLHW020000161.1 <> na Primary Assembly 16915 na AKR_J#1#179 unplaced-scaffold na na CAKLHW020000162.1 <> na Primary Assembly 92819 na AKR_J#1#80 unplaced-scaffold na na CAKLHW020000163.1 <> na Primary Assembly 24281 na AKR_J#1#101 unplaced-scaffold na na CAKLHW020000164.1 <> na Primary Assembly 18828 na AKR_J#1#63 unplaced-scaffold na na CAKLHW020000165.1 <> na Primary Assembly 12508 na AKR_J#1#163 unplaced-scaffold na na CAKLHW020000166.1 <> na Primary Assembly 22596 na AKR_J#1#117 unplaced-scaffold na na CAKLHW020000167.1 <> na Primary Assembly 18717 na AKR_J#1#105 unplaced-scaffold na na CAKLHW020000168.1 <> na Primary Assembly 46526 na AKR_J#1#27 unplaced-scaffold na na CAKLHW020000169.1 <> na Primary Assembly 11848 na AKR_J#1#97 unplaced-scaffold na na CAKLHW020000170.1 <> na Primary Assembly 35430 na AKR_J#1#46 unplaced-scaffold na na CAKLHW020000171.1 <> na Primary Assembly 26080 na AKR_J#1#188 unplaced-scaffold na na CAKLHW020000172.1 <> na Primary Assembly 29837 na AKR_J#1#35 unplaced-scaffold na na CAKLHW020000173.1 <> na Primary Assembly 38077 na AKR_J#1#156 unplaced-scaffold na na CAKLHW020000174.1 <> na Primary Assembly 15955 na AKR_J#1#MT assembled-molecule MIT Mitochondrion OW971614.1 <> na non-nuclear 16301 na