# Assembly name: SPRET_EiJ_v3 # Organism name: Mus spretus (western wild mouse) # Taxid: 10096 # BioSample: SAMEA9544175 # BioProject: PRJEB47108 # Submitter: EMBL-EBI, WELLCOME TRUST GENOME CAMPUS, CAMBRIDGE # Date: 2022-06-30 # Assembly type: haploid # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: CAKLHJ02 # Genome coverage: 40x # RefSeq category: Representative Genome # GenBank assembly accession: GCA_921997135.2 # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_921997134.2 Primary Assembly ## GCA_921997136.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name SPRET_EiJ#1#chr1 assembled-molecule 1 Chromosome OW971678.1 <> na Primary Assembly 194686469 na SPRET_EiJ#1#chr2 assembled-molecule 2 Chromosome OW971679.1 <> na Primary Assembly 178507434 na SPRET_EiJ#1#chr3 assembled-molecule 3 Chromosome OW971680.1 <> na Primary Assembly 157584965 na SPRET_EiJ#1#chr4 assembled-molecule 4 Chromosome OW971682.1 <> na Primary Assembly 149462870 na SPRET_EiJ#1#chr5 assembled-molecule 5 Chromosome OW971684.1 <> na Primary Assembly 146790071 na SPRET_EiJ#1#chr6 assembled-molecule 6 Chromosome OW971683.1 <> na Primary Assembly 148368623 na SPRET_EiJ#1#chr7 assembled-molecule 7 Chromosome OW971685.1 <> na Primary Assembly 133171552 na SPRET_EiJ#1#chr8 assembled-molecule 8 Chromosome OW971687.1 <> na Primary Assembly 126604598 na SPRET_EiJ#1#chr9 assembled-molecule 9 Chromosome OW971688.1 <> na Primary Assembly 122582605 na SPRET_EiJ#1#chr10 assembled-molecule 10 Chromosome OW971686.1 <> na Primary Assembly 129120363 na SPRET_EiJ#1#chr11 assembled-molecule 11 Chromosome OW971689.1 <> na Primary Assembly 119699844 na SPRET_EiJ#1#chr12 assembled-molecule 12 Chromosome OW971692.1 <> na Primary Assembly 115873938 na SPRET_EiJ#1#chr13 assembled-molecule 13 Chromosome OW971691.1 <> na Primary Assembly 116489622 na SPRET_EiJ#1#chr14 assembled-molecule 14 Chromosome OW971690.1 <> na Primary Assembly 117463227 na SPRET_EiJ#1#chr15 assembled-molecule 15 Chromosome OW971693.1 <> na Primary Assembly 102377802 na SPRET_EiJ#1#chr16 assembled-molecule 16 Chromosome OW971694.1 <> na Primary Assembly 95816514 na SPRET_EiJ#1#chr17 assembled-molecule 17 Chromosome OW971695.1 <> na Primary Assembly 91163686 na SPRET_EiJ#1#chr18 assembled-molecule 18 Chromosome OW971696.1 <> na Primary Assembly 88744251 na SPRET_EiJ#1#chr19 assembled-molecule 19 Chromosome OW971697.1 <> na Primary Assembly 57496413 na SPRET_EiJ#1#chrX assembled-molecule X Chromosome OW971681.1 <> na Primary Assembly 150320801 na SPRET_EiJ#1#chr9_unloc_1 unplaced-scaffold na na CAKLHJ020000001.1 <> na Primary Assembly 140264 na SPRET_EiJ#1#chr9_unloc_2 unplaced-scaffold na na CAKLHJ020000002.1 <> na Primary Assembly 114248 na SPRET_EiJ#1#131 unplaced-scaffold na na CAKLHJ020000003.1 <> na Primary Assembly 230566 na SPRET_EiJ#1#70 unplaced-scaffold na na CAKLHJ020000004.1 <> na Primary Assembly 184466 na SPRET_EiJ#1#141 unplaced-scaffold na na CAKLHJ020000005.1 <> na Primary Assembly 128598 na SPRET_EiJ#1#62 unplaced-scaffold na na CAKLHJ020000006.1 <> na Primary Assembly 117055 na SPRET_EiJ#1#50 unplaced-scaffold na na CAKLHJ020000007.1 <> na Primary Assembly 114303 na SPRET_EiJ#1#121 unplaced-scaffold na na CAKLHJ020000008.1 <> na Primary Assembly 113909 na SPRET_EiJ#1#128 unplaced-scaffold na na CAKLHJ020000009.1 <> na Primary Assembly 95967 na SPRET_EiJ#1#90 unplaced-scaffold na na CAKLHJ020000010.1 <> na Primary Assembly 88284 na SPRET_EiJ#1#97 unplaced-scaffold na na CAKLHJ020000011.1 <> na Primary Assembly 81356 na SPRET_EiJ#1#52 unplaced-scaffold na na CAKLHJ020000012.1 <> na Primary Assembly 72103 na SPRET_EiJ#1#118 unplaced-scaffold na na CAKLHJ020000013.1 <> na Primary Assembly 67490 na SPRET_EiJ#1#112 unplaced-scaffold na na CAKLHJ020000014.1 <> na Primary Assembly 65935 na SPRET_EiJ#1#85 unplaced-scaffold na na CAKLHJ020000015.1 <> na Primary Assembly 64888 na SPRET_EiJ#1#103 unplaced-scaffold na na CAKLHJ020000016.1 <> na Primary Assembly 64437 na SPRET_EiJ#1#21 unplaced-scaffold na na CAKLHJ020000017.1 <> na Primary Assembly 62304 na SPRET_EiJ#1#91 unplaced-scaffold na na CAKLHJ020000018.1 <> na Primary Assembly 53674 na SPRET_EiJ#1#46 unplaced-scaffold na na CAKLHJ020000019.1 <> na Primary Assembly 51107 na SPRET_EiJ#1#76 unplaced-scaffold na na CAKLHJ020000020.1 <> na Primary Assembly 49265 na SPRET_EiJ#1#34 unplaced-scaffold na na CAKLHJ020000021.1 <> na Primary Assembly 48796 na SPRET_EiJ#1#133 unplaced-scaffold na na CAKLHJ020000022.1 <> na Primary Assembly 45131 na SPRET_EiJ#1#96 unplaced-scaffold na na CAKLHJ020000023.1 <> na Primary Assembly 42441 na SPRET_EiJ#1#42 unplaced-scaffold na na CAKLHJ020000024.1 <> na Primary Assembly 37563 na SPRET_EiJ#1#75 unplaced-scaffold na na CAKLHJ020000025.1 <> na Primary Assembly 36385 na SPRET_EiJ#1#26 unplaced-scaffold na na CAKLHJ020000026.1 <> na Primary Assembly 34085 na SPRET_EiJ#1#61 unplaced-scaffold na na CAKLHJ020000027.1 <> na Primary Assembly 33005 na SPRET_EiJ#1#69 unplaced-scaffold na na CAKLHJ020000028.1 <> na Primary Assembly 31350 na SPRET_EiJ#1#129 unplaced-scaffold na na CAKLHJ020000029.1 <> na Primary Assembly 30367 na SPRET_EiJ#1#32 unplaced-scaffold na na CAKLHJ020000030.1 <> na Primary Assembly 27697 na SPRET_EiJ#1#41 unplaced-scaffold na na CAKLHJ020000031.1 <> na Primary Assembly 26382 na SPRET_EiJ#1#142 unplaced-scaffold na na CAKLHJ020000032.1 <> na Primary Assembly 26063 na SPRET_EiJ#1#71 unplaced-scaffold na na CAKLHJ020000033.1 <> na Primary Assembly 25064 na SPRET_EiJ#1#33 unplaced-scaffold na na CAKLHJ020000034.1 <> na Primary Assembly 23800 na SPRET_EiJ#1#55 unplaced-scaffold na na CAKLHJ020000035.1 <> na Primary Assembly 23028 na SPRET_EiJ#1#60 unplaced-scaffold na na CAKLHJ020000036.1 <> na Primary Assembly 22586 na SPRET_EiJ#1#123 unplaced-scaffold na na CAKLHJ020000037.1 <> na Primary Assembly 21107 na SPRET_EiJ#1#56 unplaced-scaffold na na CAKLHJ020000038.1 <> na Primary Assembly 20756 na SPRET_EiJ#1#58 unplaced-scaffold na na CAKLHJ020000039.1 <> na Primary Assembly 18833 na SPRET_EiJ#1#39 unplaced-scaffold na na CAKLHJ020000040.1 <> na Primary Assembly 18203 na SPRET_EiJ#1#126 unplaced-scaffold na na CAKLHJ020000041.1 <> na Primary Assembly 17278 na SPRET_EiJ#1#27 unplaced-scaffold na na CAKLHJ020000042.1 <> na Primary Assembly 15941 na SPRET_EiJ#1#136 unplaced-scaffold na na CAKLHJ020000043.1 <> na Primary Assembly 14373 na SPRET_EiJ#1#88 unplaced-scaffold na na CAKLHJ020000044.1 <> na Primary Assembly 13019 na SPRET_EiJ#1#43 unplaced-scaffold na na CAKLHJ020000045.1 <> na Primary Assembly 12197 na SPRET_EiJ#1#74 unplaced-scaffold na na CAKLHJ020000046.1 <> na Primary Assembly 10752 na SPRET_EiJ#1#89 unplaced-scaffold na na CAKLHJ020000047.1 <> na Primary Assembly 10113 na SPRET_EiJ#1#22 unplaced-scaffold na na CAKLHJ020000048.1 <> na Primary Assembly 21992 na SPRET_EiJ#1#23 unplaced-scaffold na na CAKLHJ020000049.1 <> na Primary Assembly 23048 na SPRET_EiJ#1#24 unplaced-scaffold na na CAKLHJ020000050.1 <> na Primary Assembly 33621 na SPRET_EiJ#1#25 unplaced-scaffold na na CAKLHJ020000051.1 <> na Primary Assembly 10357 na SPRET_EiJ#1#29 unplaced-scaffold na na CAKLHJ020000052.1 <> na Primary Assembly 26377 na SPRET_EiJ#1#30 unplaced-scaffold na na CAKLHJ020000053.1 <> na Primary Assembly 12647 na SPRET_EiJ#1#31 unplaced-scaffold na na CAKLHJ020000054.1 <> na Primary Assembly 27644 na SPRET_EiJ#1#35 unplaced-scaffold na na CAKLHJ020000055.1 <> na Primary Assembly 41235 na SPRET_EiJ#1#36 unplaced-scaffold na na CAKLHJ020000056.1 <> na Primary Assembly 12393 na SPRET_EiJ#1#37 unplaced-scaffold na na CAKLHJ020000057.1 <> na Primary Assembly 13272 na SPRET_EiJ#1#38 unplaced-scaffold na na CAKLHJ020000058.1 <> na Primary Assembly 16426 na SPRET_EiJ#1#40 unplaced-scaffold na na CAKLHJ020000059.1 <> na Primary Assembly 13432 na SPRET_EiJ#1#45 unplaced-scaffold na na CAKLHJ020000060.1 <> na Primary Assembly 29496 na SPRET_EiJ#1#47 unplaced-scaffold na na CAKLHJ020000061.1 <> na Primary Assembly 11862 na SPRET_EiJ#1#48 unplaced-scaffold na na CAKLHJ020000062.1 <> na Primary Assembly 11893 na SPRET_EiJ#1#49 unplaced-scaffold na na CAKLHJ020000063.1 <> na Primary Assembly 26836 na SPRET_EiJ#1#51 unplaced-scaffold na na CAKLHJ020000064.1 <> na Primary Assembly 24163 na SPRET_EiJ#1#53 unplaced-scaffold na na CAKLHJ020000065.1 <> na Primary Assembly 20825 na SPRET_EiJ#1#57 unplaced-scaffold na na CAKLHJ020000066.1 <> na Primary Assembly 43301 na SPRET_EiJ#1#59 unplaced-scaffold na na CAKLHJ020000067.1 <> na Primary Assembly 11034 na SPRET_EiJ#1#63 unplaced-scaffold na na CAKLHJ020000068.1 <> na Primary Assembly 31491 na SPRET_EiJ#1#64 unplaced-scaffold na na CAKLHJ020000069.1 <> na Primary Assembly 18030 na SPRET_EiJ#1#65 unplaced-scaffold na na CAKLHJ020000070.1 <> na Primary Assembly 37500 na SPRET_EiJ#1#66 unplaced-scaffold na na CAKLHJ020000071.1 <> na Primary Assembly 26291 na SPRET_EiJ#1#67 unplaced-scaffold na na CAKLHJ020000072.1 <> na Primary Assembly 31882 na SPRET_EiJ#1#68 unplaced-scaffold na na CAKLHJ020000073.1 <> na Primary Assembly 20758 na SPRET_EiJ#1#72 unplaced-scaffold na na CAKLHJ020000074.1 <> na Primary Assembly 21715 na SPRET_EiJ#1#73 unplaced-scaffold na na CAKLHJ020000075.1 <> na Primary Assembly 22633 na SPRET_EiJ#1#77 unplaced-scaffold na na CAKLHJ020000076.1 <> na Primary Assembly 50470 na SPRET_EiJ#1#78 unplaced-scaffold na na CAKLHJ020000077.1 <> na Primary Assembly 15236 na SPRET_EiJ#1#79 unplaced-scaffold na na CAKLHJ020000078.1 <> na Primary Assembly 17816 na SPRET_EiJ#1#80 unplaced-scaffold na na CAKLHJ020000079.1 <> na Primary Assembly 11517 na SPRET_EiJ#1#81 unplaced-scaffold na na CAKLHJ020000080.1 <> na Primary Assembly 34647 na SPRET_EiJ#1#82 unplaced-scaffold na na CAKLHJ020000081.1 <> na Primary Assembly 18355 na SPRET_EiJ#1#83 unplaced-scaffold na na CAKLHJ020000082.1 <> na Primary Assembly 21447 na SPRET_EiJ#1#84 unplaced-scaffold na na CAKLHJ020000083.1 <> na Primary Assembly 25654 na SPRET_EiJ#1#86 unplaced-scaffold na na CAKLHJ020000084.1 <> na Primary Assembly 13348 na SPRET_EiJ#1#87 unplaced-scaffold na na CAKLHJ020000085.1 <> na Primary Assembly 28071 na SPRET_EiJ#1#92 unplaced-scaffold na na CAKLHJ020000086.1 <> na Primary Assembly 17238 na SPRET_EiJ#1#93 unplaced-scaffold na na CAKLHJ020000087.1 <> na Primary Assembly 17406 na SPRET_EiJ#1#94 unplaced-scaffold na na CAKLHJ020000088.1 <> na Primary Assembly 12630 na SPRET_EiJ#1#95 unplaced-scaffold na na CAKLHJ020000089.1 <> na Primary Assembly 10315 na SPRET_EiJ#1#98 unplaced-scaffold na na CAKLHJ020000090.1 <> na Primary Assembly 19420 na SPRET_EiJ#1#99 unplaced-scaffold na na CAKLHJ020000091.1 <> na Primary Assembly 16027 na SPRET_EiJ#1#100 unplaced-scaffold na na CAKLHJ020000092.1 <> na Primary Assembly 19811 na SPRET_EiJ#1#101 unplaced-scaffold na na CAKLHJ020000093.1 <> na Primary Assembly 11092 na SPRET_EiJ#1#102 unplaced-scaffold na na CAKLHJ020000094.1 <> na Primary Assembly 13424 na SPRET_EiJ#1#104 unplaced-scaffold na na CAKLHJ020000095.1 <> na Primary Assembly 23984 na SPRET_EiJ#1#105 unplaced-scaffold na na CAKLHJ020000096.1 <> na Primary Assembly 70352 na SPRET_EiJ#1#106 unplaced-scaffold na na CAKLHJ020000097.1 <> na Primary Assembly 31258 na SPRET_EiJ#1#107 unplaced-scaffold na na CAKLHJ020000098.1 <> na Primary Assembly 19485 na SPRET_EiJ#1#109 unplaced-scaffold na na CAKLHJ020000099.1 <> na Primary Assembly 22938 na SPRET_EiJ#1#110 unplaced-scaffold na na CAKLHJ020000100.1 <> na Primary Assembly 10549 na SPRET_EiJ#1#111 unplaced-scaffold na na CAKLHJ020000101.1 <> na Primary Assembly 10516 na SPRET_EiJ#1#113 unplaced-scaffold na na CAKLHJ020000102.1 <> na Primary Assembly 10400 na SPRET_EiJ#1#114 unplaced-scaffold na na CAKLHJ020000103.1 <> na Primary Assembly 18756 na SPRET_EiJ#1#115 unplaced-scaffold na na CAKLHJ020000104.1 <> na Primary Assembly 14656 na SPRET_EiJ#1#116 unplaced-scaffold na na CAKLHJ020000105.1 <> na Primary Assembly 13105 na SPRET_EiJ#1#117 unplaced-scaffold na na CAKLHJ020000106.1 <> na Primary Assembly 11316 na SPRET_EiJ#1#119 unplaced-scaffold na na CAKLHJ020000107.1 <> na Primary Assembly 10292 na SPRET_EiJ#1#120 unplaced-scaffold na na CAKLHJ020000108.1 <> na Primary Assembly 12297 na SPRET_EiJ#1#122 unplaced-scaffold na na CAKLHJ020000109.1 <> na Primary Assembly 48741 na SPRET_EiJ#1#125 unplaced-scaffold na na CAKLHJ020000110.1 <> na Primary Assembly 15367 na SPRET_EiJ#1#127 unplaced-scaffold na na CAKLHJ020000111.1 <> na Primary Assembly 15394 na SPRET_EiJ#1#130 unplaced-scaffold na na CAKLHJ020000112.1 <> na Primary Assembly 20909 na SPRET_EiJ#1#132 unplaced-scaffold na na CAKLHJ020000113.1 <> na Primary Assembly 12362 na SPRET_EiJ#1#134 unplaced-scaffold na na CAKLHJ020000114.1 <> na Primary Assembly 61938 na SPRET_EiJ#1#135 unplaced-scaffold na na CAKLHJ020000115.1 <> na Primary Assembly 26005 na SPRET_EiJ#1#137 unplaced-scaffold na na CAKLHJ020000116.1 <> na Primary Assembly 23678 na SPRET_EiJ#1#138 unplaced-scaffold na na CAKLHJ020000117.1 <> na Primary Assembly 18607 na SPRET_EiJ#1#140 unplaced-scaffold na na CAKLHJ020000118.1 <> na Primary Assembly 16634 na SPRET_EiJ#1#MT assembled-molecule MIT Mitochondrion OW971698.1 <> na non-nuclear 16303 na