# Assembly name: bCapEur3.1 # Organism name: Caprimulgus europaeus (Eurasian nightjar) # Taxid: 111811 # BioSample: SAMEA7524394 # BioProject: PRJEB44540 # Submitter: WELLCOME SANGER INSTITUTE # Date: 2021-05-17 # Assembly type: haploid (principal pseudohaplotype of diploid) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: CAJRAV01 # Genome coverage: 87x # RefSeq category: Representative Genome # GenBank assembly accession: GCA_907165065.1 # Linked assembly: GCA_907165095.1 (alternate pseudohaplotype of diploid) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_907165064.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name SUPER_1 assembled-molecule 1 Chromosome OU015523.1 <> na Primary Assembly 126318510 na SUPER_2 assembled-molecule 2 Chromosome OU015524.1 <> na Primary Assembly 125369552 na SUPER_3 assembled-molecule 3 Chromosome OU015525.1 <> na Primary Assembly 100158136 na SUPER_4 assembled-molecule 4 Chromosome OU015526.1 <> na Primary Assembly 83320075 na SUPER_5 assembled-molecule 5 Chromosome OU015528.1 <> na Primary Assembly 82614289 na SUPER_6 assembled-molecule 6 Chromosome OU015529.1 <> na Primary Assembly 65352188 na SUPER_7 assembled-molecule 7 Chromosome OU015530.1 <> na Primary Assembly 60467248 na SUPER_8 assembled-molecule 8 Chromosome OU015531.1 <> na Primary Assembly 50913645 na SUPER_9 assembled-molecule 9 Chromosome OU015532.1 <> na Primary Assembly 48660147 na SUPER_10 assembled-molecule 10 Chromosome OU015533.1 <> na Primary Assembly 43004850 na SUPER_11 assembled-molecule 11 Chromosome OU015534.1 <> na Primary Assembly 35230674 na SUPER_12 assembled-molecule 12 Chromosome OU015535.1 <> na Primary Assembly 23520972 na SUPER_13 assembled-molecule 13 Chromosome OU015536.1 <> na Primary Assembly 22807378 na SUPER_14 assembled-molecule 14 Chromosome OU015538.1 <> na Primary Assembly 22349459 na SUPER_15 assembled-molecule 15 Chromosome OU015539.1 <> na Primary Assembly 19400540 na SUPER_16 assembled-molecule 16 Chromosome OU015540.1 <> na Primary Assembly 18743433 na SUPER_17 assembled-molecule 17 Chromosome OU015541.1 <> na Primary Assembly 16934410 na SUPER_18 assembled-molecule 18 Chromosome OU015542.1 <> na Primary Assembly 15699869 na SUPER_19 assembled-molecule 19 Chromosome OU015543.1 <> na Primary Assembly 13782655 na SUPER_20 assembled-molecule 20 Chromosome OU015544.1 <> na Primary Assembly 12518677 na SUPER_21 assembled-molecule 21 Chromosome OU015545.1 <> na Primary Assembly 12349417 na SUPER_22 assembled-molecule 22 Chromosome OU015546.1 <> na Primary Assembly 9157100 na SUPER_23 assembled-molecule 23 Chromosome OU015547.1 <> na Primary Assembly 8187400 na SUPER_24 assembled-molecule 24 Chromosome OU015548.1 <> na Primary Assembly 7570459 na SUPER_25 assembled-molecule 25 Chromosome OU015549.1 <> na Primary Assembly 7538749 na SUPER_26 assembled-molecule 26 Chromosome OU015550.1 <> na Primary Assembly 7503399 na SUPER_27 assembled-molecule 27 Chromosome OU015551.1 <> na Primary Assembly 6260693 na SUPER_28 assembled-molecule 28 Chromosome OU015552.1 <> na Primary Assembly 6036106 na SUPER_29 assembled-molecule 29 Chromosome OU015553.1 <> na Primary Assembly 3387428 na SUPER_30 assembled-molecule 30 Chromosome OU015554.1 <> na Primary Assembly 2941247 na SUPER_31 assembled-molecule 31 Chromosome OU015555.1 <> na Primary Assembly 2473183 na SUPER_32 assembled-molecule 32 Chromosome OU015556.1 <> na Primary Assembly 2222269 na SUPER_33 assembled-molecule 33 Chromosome OU015557.1 <> na Primary Assembly 1263716 na SUPER_34 assembled-molecule 34 Chromosome OU015558.1 <> na Primary Assembly 563335 na SUPER_35 assembled-molecule 35 Chromosome OU015559.1 <> na Primary Assembly 197118 na SUPER_W assembled-molecule W Chromosome OU015537.1 <> na Primary Assembly 22485285 na SUPER_Z assembled-molecule Z Chromosome OU015527.1 <> na Primary Assembly 82627501 na contig1 unplaced-scaffold na na CAJRAV010000001.1 <> na Primary Assembly 809941 na contig2 unplaced-scaffold na na CAJRAV010000002.1 <> na Primary Assembly 807536 na contig3 unplaced-scaffold na na CAJRAV010000003.1 <> na Primary Assembly 635644 na contig4 unplaced-scaffold na na CAJRAV010000004.1 <> na Primary Assembly 483522 na contig5 unplaced-scaffold na na CAJRAV010000005.1 <> na Primary Assembly 427667 na contig6 unplaced-scaffold na na CAJRAV010000006.1 <> na Primary Assembly 360154 na contig7 unplaced-scaffold na na CAJRAV010000007.1 <> na Primary Assembly 270483 na contig8 unplaced-scaffold na na CAJRAV010000008.1 <> na Primary Assembly 236727 na contig9 unplaced-scaffold na na CAJRAV010000009.1 <> na Primary Assembly 196644 na contig10 unplaced-scaffold na na CAJRAV010000010.1 <> na Primary Assembly 181517 na contig11 unplaced-scaffold na na CAJRAV010000011.1 <> na Primary Assembly 143624 na contig12 unplaced-scaffold na na CAJRAV010000012.1 <> na Primary Assembly 135779 na contig13 unplaced-scaffold na na CAJRAV010000013.1 <> na Primary Assembly 136169 na contig14 unplaced-scaffold na na CAJRAV010000014.1 <> na Primary Assembly 113775 na contig15 unplaced-scaffold na na CAJRAV010000015.1 <> na Primary Assembly 111463 na contig16 unplaced-scaffold na na CAJRAV010000016.1 <> na Primary Assembly 109450 na contig17 unplaced-scaffold na na CAJRAV010000017.1 <> na Primary Assembly 106366 na contig18 unplaced-scaffold na na CAJRAV010000018.1 <> na Primary Assembly 97494 na contig19 unplaced-scaffold na na CAJRAV010000019.1 <> na Primary Assembly 85255 na contig20 unplaced-scaffold na na CAJRAV010000020.1 <> na Primary Assembly 83639 na contig21 unplaced-scaffold na na CAJRAV010000021.1 <> na Primary Assembly 79780 na contig22 unplaced-scaffold na na CAJRAV010000022.1 <> na Primary Assembly 68722 na contig23 unplaced-scaffold na na CAJRAV010000023.1 <> na Primary Assembly 60967 na contig24 unplaced-scaffold na na CAJRAV010000024.1 <> na Primary Assembly 58688 na contig25 unplaced-scaffold na na CAJRAV010000025.1 <> na Primary Assembly 57106 na contig26 unplaced-scaffold na na CAJRAV010000026.1 <> na Primary Assembly 57055 na contig27 unplaced-scaffold na na CAJRAV010000027.1 <> na Primary Assembly 56869 na contig28 unplaced-scaffold na na CAJRAV010000028.1 <> na Primary Assembly 56315 na contig29 unplaced-scaffold na na CAJRAV010000029.1 <> na Primary Assembly 56101 na contig30 unplaced-scaffold na na CAJRAV010000030.1 <> na Primary Assembly 56091 na contig31 unplaced-scaffold na na CAJRAV010000031.1 <> na Primary Assembly 54095 na contig32 unplaced-scaffold na na CAJRAV010000032.1 <> na Primary Assembly 50677 na contig33 unplaced-scaffold na na CAJRAV010000033.1 <> na Primary Assembly 50120 na contig34 unplaced-scaffold na na CAJRAV010000034.1 <> na Primary Assembly 49144 na contig35 unplaced-scaffold na na CAJRAV010000035.1 <> na Primary Assembly 48695 na contig36 unplaced-scaffold na na CAJRAV010000036.1 <> na Primary Assembly 47342 na contig37 unplaced-scaffold na na CAJRAV010000037.1 <> na Primary Assembly 46134 na contig38 unplaced-scaffold na na CAJRAV010000038.1 <> na Primary Assembly 45151 na contig39 unplaced-scaffold na na CAJRAV010000039.1 <> na Primary Assembly 44952 na contig40 unplaced-scaffold na na CAJRAV010000040.1 <> na Primary Assembly 40649 na contig41 unplaced-scaffold na na CAJRAV010000041.1 <> na Primary Assembly 40242 na contig42 unplaced-scaffold na na CAJRAV010000042.1 <> na Primary Assembly 39615 na contig43 unplaced-scaffold na na CAJRAV010000043.1 <> na Primary Assembly 38966 na contig44 unplaced-scaffold na na CAJRAV010000044.1 <> na Primary Assembly 38803 na contig45 unplaced-scaffold na na CAJRAV010000045.1 <> na Primary Assembly 37554 na contig46 unplaced-scaffold na na CAJRAV010000046.1 <> na Primary Assembly 36204 na contig47 unplaced-scaffold na na CAJRAV010000047.1 <> na Primary Assembly 35416 na contig48 unplaced-scaffold na na CAJRAV010000048.1 <> na Primary Assembly 35164 na contig49 unplaced-scaffold na na CAJRAV010000049.1 <> na Primary Assembly 35189 na contig50 unplaced-scaffold na na CAJRAV010000050.1 <> na Primary Assembly 35030 na contig51 unplaced-scaffold na na CAJRAV010000051.1 <> na Primary Assembly 34688 na contig52 unplaced-scaffold na na CAJRAV010000052.1 <> na Primary Assembly 34208 na contig53 unplaced-scaffold na na CAJRAV010000053.1 <> na Primary Assembly 34123 na contig54 unplaced-scaffold na na CAJRAV010000054.1 <> na Primary Assembly 33777 na contig55 unplaced-scaffold na na CAJRAV010000055.1 <> na Primary Assembly 33127 na contig56 unplaced-scaffold na na CAJRAV010000056.1 <> na Primary Assembly 32835 na contig57 unplaced-scaffold na na CAJRAV010000057.1 <> na Primary Assembly 32558 na contig58 unplaced-scaffold na na CAJRAV010000058.1 <> na Primary Assembly 31877 na contig59 unplaced-scaffold na na CAJRAV010000059.1 <> na Primary Assembly 31804 na contig60 unplaced-scaffold na na CAJRAV010000060.1 <> na Primary Assembly 29575 na contig61 unplaced-scaffold na na CAJRAV010000061.1 <> na Primary Assembly 29090 na contig62 unplaced-scaffold na na CAJRAV010000062.1 <> na Primary Assembly 28929 na contig63 unplaced-scaffold na na CAJRAV010000063.1 <> na Primary Assembly 28514 na contig64 unplaced-scaffold na na CAJRAV010000064.1 <> na Primary Assembly 27259 na contig65 unplaced-scaffold na na CAJRAV010000065.1 <> na Primary Assembly 26573 na contig66 unplaced-scaffold na na CAJRAV010000066.1 <> na Primary Assembly 25100 na contig67 unplaced-scaffold na na CAJRAV010000067.1 <> na Primary Assembly 24922 na contig68 unplaced-scaffold na na CAJRAV010000068.1 <> na Primary Assembly 24508 na contig69 unplaced-scaffold na na CAJRAV010000069.1 <> na Primary Assembly 23646 na contig70 unplaced-scaffold na na CAJRAV010000070.1 <> na Primary Assembly 23397 na contig71 unplaced-scaffold na na CAJRAV010000071.1 <> na Primary Assembly 23297 na contig72 unplaced-scaffold na na CAJRAV010000072.1 <> na Primary Assembly 22583 na contig73 unplaced-scaffold na na CAJRAV010000073.1 <> na Primary Assembly 22362 na contig74 unplaced-scaffold na na CAJRAV010000074.1 <> na Primary Assembly 22314 na contig75 unplaced-scaffold na na CAJRAV010000075.1 <> na Primary Assembly 22295 na contig76 unplaced-scaffold na na CAJRAV010000076.1 <> na Primary Assembly 21717 na contig77 unplaced-scaffold na na CAJRAV010000077.1 <> na Primary Assembly 20850 na contig78 unplaced-scaffold na na CAJRAV010000078.1 <> na Primary Assembly 20773 na contig79 unplaced-scaffold na na CAJRAV010000079.1 <> na Primary Assembly 20788 na contig80 unplaced-scaffold na na CAJRAV010000080.1 <> na Primary Assembly 20390 na contig81 unplaced-scaffold na na CAJRAV010000081.1 <> na Primary Assembly 20349 na contig82 unplaced-scaffold na na CAJRAV010000082.1 <> na Primary Assembly 16123 na contig83 unplaced-scaffold na na CAJRAV010000083.1 <> na Primary Assembly 15723 na contig84 unplaced-scaffold na na CAJRAV010000084.1 <> na Primary Assembly 10341 na