# Assembly name: mEidDup1.hap1 # Organism name: Eidolon dupreanum (Malagasy straw-colored fruit bat) # Isolate: mEidDup1 # Sex: female # Taxid: 58063 # BioSample: SAMN61283380 # BioProject: PRJNA1489275 # Submitter: Vertebrate Genomes Project # Date: 2026-08-03 # Assembly type: haploid (haplotype 1) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JCBABO01 # Assembly method: Hifiasm + Hi-C phasing v. 0.25.0 + galaxy0; yahs v. 1.2a.2 + galaxy2 # Expected final version: No # Genome coverage: 55.05x # Sequencing technology: PacBio Revio HiFi; Arima Hi-C v2 # GenBank assembly accession: GCA_059749095.1 # Linked assembly: GCA_059749105.1 (haplotype 2) # ## Assembly-Unit names: ## Primary Assembly ## non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name SUPER_1 assembled-molecule 1 Chromosome CM185961.1 <> na Primary Assembly 196243506 na SUPER_2 assembled-molecule 2 Chromosome CM185962.1 <> na Primary Assembly 183995236 na SUPER_3 assembled-molecule 3 Chromosome CM185963.1 <> na Primary Assembly 179334451 na SUPER_4 assembled-molecule 4 Chromosome CM185964.1 <> na Primary Assembly 166379815 na SUPER_5 assembled-molecule 5 Chromosome CM185965.1 <> na Primary Assembly 147848853 na SUPER_6 assembled-molecule 6 Chromosome CM185966.1 <> na Primary Assembly 129550246 na SUPER_7 assembled-molecule 7 Chromosome CM185967.1 <> na Primary Assembly 119341692 na SUPER_8 assembled-molecule 8 Chromosome CM185968.1 <> na Primary Assembly 118932093 na SUPER_9 assembled-molecule 9 Chromosome CM185969.1 <> na Primary Assembly 113967108 na SUPER_10 assembled-molecule 10 Chromosome CM185970.1 <> na Primary Assembly 102976013 na SUPER_11 assembled-molecule 11 Chromosome CM185971.1 <> na Primary Assembly 97952550 na SUPER_12 assembled-molecule 12 Chromosome CM185972.1 <> na Primary Assembly 85095345 na SUPER_13 assembled-molecule 13 Chromosome CM185973.1 <> na Primary Assembly 65371626 na SUPER_14 assembled-molecule 14 Chromosome CM185974.1 <> na Primary Assembly 58334024 na SUPER_15 assembled-molecule 15 Chromosome CM185975.1 <> na Primary Assembly 53523414 na SUPER_16 assembled-molecule 16 Chromosome CM185976.1 <> na Primary Assembly 39496995 na SUPER_X assembled-molecule X Chromosome CM185977.1 <> na Primary Assembly 121053106 na SUPER_1_unloc_1 unlocalized-scaffold 1 Chromosome JCBABO010000021.1 <> na Primary Assembly 996350 na SUPER_6_unloc_2 unlocalized-scaffold 6 Chromosome JCBABO010000020.1 <> na Primary Assembly 1877702 na SUPER_6_unloc_1 unlocalized-scaffold 6 Chromosome JCBABO010000024.1 <> na Primary Assembly 587679 na SUPER_8_unloc_1 unlocalized-scaffold 8 Chromosome JCBABO010000023.1 <> na Primary Assembly 749711 na Scaffold_35 unplaced-scaffold na na JCBABO010000019.1 <> na Primary Assembly 2615330 na Scaffold_39 unplaced-scaffold na na JCBABO010000022.1 <> na Primary Assembly 939387 na Scaffold_43 unplaced-scaffold na na JCBABO010000025.1 <> na Primary Assembly 410591 na Scaffold_38 unplaced-scaffold na na JCBABO010000026.1 <> na Primary Assembly 382920 na Scaffold_46 unplaced-scaffold na na JCBABO010000027.1 <> na Primary Assembly 335973 na Scaffold_48 unplaced-scaffold na na JCBABO010000028.1 <> na Primary Assembly 310661 na Scaffold_49 unplaced-scaffold na na JCBABO010000029.1 <> na Primary Assembly 292121 na Scaffold_50 unplaced-scaffold na na JCBABO010000030.1 <> na Primary Assembly 292011 na Scaffold_54 unplaced-scaffold na na JCBABO010000031.1 <> na Primary Assembly 208085 na Scaffold_55 unplaced-scaffold na na JCBABO010000032.1 <> na Primary Assembly 197127 na Scaffold_57 unplaced-scaffold na na JCBABO010000033.1 <> na Primary Assembly 184744 na Scaffold_61 unplaced-scaffold na na JCBABO010000034.1 <> na Primary Assembly 168771 na Scaffold_62 unplaced-scaffold na na JCBABO010000035.1 <> na Primary Assembly 150276 na Scaffold_63 unplaced-scaffold na na JCBABO010000036.1 <> na Primary Assembly 141962 na Scaffold_64 unplaced-scaffold na na JCBABO010000037.1 <> na Primary Assembly 140613 na Scaffold_65 unplaced-scaffold na na JCBABO010000038.1 <> na Primary Assembly 138830 na Scaffold_66 unplaced-scaffold na na JCBABO010000039.1 <> na Primary Assembly 134656 na Scaffold_67 unplaced-scaffold na na JCBABO010000040.1 <> na Primary Assembly 132507 na Scaffold_69 unplaced-scaffold na na JCBABO010000041.1 <> na Primary Assembly 128231 na Scaffold_70 unplaced-scaffold na na JCBABO010000042.1 <> na Primary Assembly 128112 na Scaffold_72 unplaced-scaffold na na JCBABO010000043.1 <> na Primary Assembly 123280 na Scaffold_74 unplaced-scaffold na na JCBABO010000044.1 <> na Primary Assembly 114325 na Scaffold_75 unplaced-scaffold na na JCBABO010000045.1 <> na Primary Assembly 112031 na Scaffold_76 unplaced-scaffold na na JCBABO010000046.1 <> na Primary Assembly 112016 na Scaffold_77 unplaced-scaffold na na JCBABO010000047.1 <> na Primary Assembly 109648 na Scaffold_79 unplaced-scaffold na na JCBABO010000048.1 <> na Primary Assembly 99456 na Scaffold_80 unplaced-scaffold na na JCBABO010000049.1 <> na Primary Assembly 95007 na Scaffold_81 unplaced-scaffold na na JCBABO010000050.1 <> na Primary Assembly 92432 na Scaffold_83 unplaced-scaffold na na JCBABO010000051.1 <> na Primary Assembly 89040 na Scaffold_85 unplaced-scaffold na na JCBABO010000052.1 <> na Primary Assembly 76364 na Scaffold_114 unplaced-scaffold na na JCBABO010000053.1 <> na Primary Assembly 73206 na Scaffold_89 unplaced-scaffold na na JCBABO010000054.1 <> na Primary Assembly 72711 na Scaffold_90 unplaced-scaffold na na JCBABO010000055.1 <> na Primary Assembly 68541 na Scaffold_111 unplaced-scaffold na na JCBABO010000056.1 <> na Primary Assembly 63790 na Scaffold_91 unplaced-scaffold na na JCBABO010000057.1 <> na Primary Assembly 63092 na Scaffold_110 unplaced-scaffold na na JCBABO010000058.1 <> na Primary Assembly 58385 na Scaffold_109 unplaced-scaffold na na JCBABO010000059.1 <> na Primary Assembly 57819 na Scaffold_94 unplaced-scaffold na na JCBABO010000060.1 <> na Primary Assembly 56079 na Scaffold_107 unplaced-scaffold na na JCBABO010000061.1 <> na Primary Assembly 54188 na Scaffold_106 unplaced-scaffold na na JCBABO010000062.1 <> na Primary Assembly 52855 na Scaffold_105 unplaced-scaffold na na JCBABO010000063.1 <> na Primary Assembly 51770 na Scaffold_96 unplaced-scaffold na na JCBABO010000064.1 <> na Primary Assembly 51567 na Scaffold_103 unplaced-scaffold na na JCBABO010000065.1 <> na Primary Assembly 46870 na Scaffold_97 unplaced-scaffold na na JCBABO010000066.1 <> na Primary Assembly 46157 na Scaffold_101 unplaced-scaffold na na JCBABO010000067.1 <> na Primary Assembly 37616 na Scaffold_135 unplaced-scaffold na na JCBABO010000068.1 <> na Primary Assembly 30219 na Scaffold_98 unplaced-scaffold na na JCBABO010000069.1 <> na Primary Assembly 30196 na Scaffold_133 unplaced-scaffold na na JCBABO010000070.1 <> na Primary Assembly 28655 na Scaffold_132 unplaced-scaffold na na JCBABO010000071.1 <> na Primary Assembly 27871 na Scaffold_131 unplaced-scaffold na na JCBABO010000072.1 <> na Primary Assembly 26144 na Scaffold_129 unplaced-scaffold na na JCBABO010000073.1 <> na Primary Assembly 24718 na Scaffold_128 unplaced-scaffold na na JCBABO010000074.1 <> na Primary Assembly 24696 na Scaffold_127 unplaced-scaffold na na JCBABO010000075.1 <> na Primary Assembly 24685 na Scaffold_126 unplaced-scaffold na na JCBABO010000076.1 <> na Primary Assembly 21432 na Scaffold_125 unplaced-scaffold na na JCBABO010000077.1 <> na Primary Assembly 20799 na Scaffold_124 unplaced-scaffold na na JCBABO010000078.1 <> na Primary Assembly 19888 na Scaffold_123 unplaced-scaffold na na JCBABO010000079.1 <> na Primary Assembly 18618 na Scaffold_122 unplaced-scaffold na na JCBABO010000080.1 <> na Primary Assembly 15352 na Scaffold_36 unplaced-scaffold na na JCBABO010000081.1 <> na Primary Assembly 15309 na atg000001l_rc_rotated assembled-molecule MT Mitochondrion CM185978.1 <> na non-nuclear 16804 na