# Assembly name: fLutCar1.hap2.cur.20230414 # Organism name: Lutjanus carponotatus (Spanish flag snapper) # Infraspecific name: ecotype=2 # Isolate: fLutCar1 # Taxid: 396785 # BioSample: SAMN41179605 # BioProject: PRJNA1101474 # Submitter: Minderoo OceanOmics Centre at University of the Western Australia # Date: 2026-07-21 # Assembly type: haploid (haplotype 2) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JBLNKG01 # Assembly method: HiFiasm v. 0.9.8 # Expected final version: Yes # Genome coverage: 75x # Sequencing technology: PacBio Sequel; Illumina NextSeq # GenBank assembly accession: GCA_059550275.1 # Linked assembly: GCA_059550285.1 (haplotype 1) # ## Assembly-Unit names: ## Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name SUPER_1 assembled-molecule 1 Chromosome CM183815.1 <> na Primary Assembly 51396624 na SUPER_2 assembled-molecule 2 Chromosome CM183816.1 <> na Primary Assembly 51426379 na SUPER_3 assembled-molecule 3 Chromosome CM183817.1 <> na Primary Assembly 50520868 na SUPER_4 assembled-molecule 4 Chromosome CM183818.1 <> na Primary Assembly 49368262 na SUPER_5 assembled-molecule 5 Chromosome CM183819.1 <> na Primary Assembly 44929751 na SUPER_6 assembled-molecule 6 Chromosome CM183820.1 <> na Primary Assembly 45225421 na SUPER_7 assembled-molecule 7 Chromosome CM183821.1 <> na Primary Assembly 44829920 na SUPER_8 assembled-molecule 8 Chromosome CM183822.1 <> na Primary Assembly 44435655 na SUPER_9 assembled-molecule 9 Chromosome CM183823.1 <> na Primary Assembly 44261969 na SUPER_10 assembled-molecule 10 Chromosome CM183824.1 <> na Primary Assembly 44063460 na SUPER_11 assembled-molecule 11 Chromosome CM183825.1 <> na Primary Assembly 43332634 na SUPER_12 assembled-molecule 12 Chromosome CM183826.1 <> na Primary Assembly 42601416 na SUPER_13 assembled-molecule 13 Chromosome CM183827.1 <> na Primary Assembly 42466451 na SUPER_14 assembled-molecule 14 Chromosome CM183828.1 <> na Primary Assembly 41959193 na SUPER_15 assembled-molecule 15 Chromosome CM183829.1 <> na Primary Assembly 39998571 na SUPER_16 assembled-molecule 16 Chromosome CM183830.1 <> na Primary Assembly 40740390 na SUPER_17 assembled-molecule 17 Chromosome CM183831.1 <> na Primary Assembly 39313160 na SUPER_18 assembled-molecule 18 Chromosome CM183832.1 <> na Primary Assembly 38777481 na SUPER_19 assembled-molecule 19 Chromosome CM183833.1 <> na Primary Assembly 37263878 na SUPER_20 assembled-molecule 20 Chromosome CM183834.1 <> na Primary Assembly 37012118 na SUPER_21 assembled-molecule 21 Chromosome CM183835.1 <> na Primary Assembly 34478682 na SUPER_22 assembled-molecule 22 Chromosome CM183836.1 <> na Primary Assembly 34115043 na SUPER_23 assembled-molecule 23 Chromosome CM183837.1 <> na Primary Assembly 30174697 na SUPER_24 assembled-molecule 24 Chromosome CM183838.1 <> na Primary Assembly 19160996 na SUPER_11_unloc_1 unlocalized-scaffold 11 Chromosome JBLNKG010000042.1 <> na Primary Assembly 268446 na SUPER_14_unloc_1 unlocalized-scaffold 14 Chromosome JBLNKG010000063.1 <> na Primary Assembly 142933 na SUPER_18_unloc_1 unlocalized-scaffold 18 Chromosome JBLNKG010000025.1 <> na Primary Assembly 1339128 na SUPER_18_unloc_4 unlocalized-scaffold 18 Chromosome JBLNKG010000036.1 <> na Primary Assembly 335651 na SUPER_18_unloc_3 unlocalized-scaffold 18 Chromosome JBLNKG010000049.1 <> na Primary Assembly 212205 na SUPER_18_unloc_2 unlocalized-scaffold 18 Chromosome JBLNKG010000051.1 <> na Primary Assembly 191797 na Scaffold_260 unplaced-scaffold na na JBLNKG010000026.1 <> na Primary Assembly 568758 na Scaffold_261 unplaced-scaffold na na JBLNKG010000027.1 <> na Primary Assembly 471643 na Scaffold_262 unplaced-scaffold na na JBLNKG010000028.1 <> na Primary Assembly 455125 na Scaffold_263 unplaced-scaffold na na JBLNKG010000029.1 <> na Primary Assembly 449324 na Scaffold_264 unplaced-scaffold na na JBLNKG010000030.1 <> na Primary Assembly 449121 na Scaffold_265 unplaced-scaffold na na JBLNKG010000031.1 <> na Primary Assembly 445375 na Scaffold_266 unplaced-scaffold na na JBLNKG010000032.1 <> na Primary Assembly 418372 na Scaffold_267 unplaced-scaffold na na JBLNKG010000033.1 <> na Primary Assembly 401025 na Scaffold_268 unplaced-scaffold na na JBLNKG010000034.1 <> na Primary Assembly 385484 na Scaffold_269 unplaced-scaffold na na JBLNKG010000035.1 <> na Primary Assembly 344769 na Scaffold_270 unplaced-scaffold na na JBLNKG010000037.1 <> na Primary Assembly 308481 na Scaffold_271 unplaced-scaffold na na JBLNKG010000038.1 <> na Primary Assembly 308091 na Scaffold_272 unplaced-scaffold na na JBLNKG010000039.1 <> na Primary Assembly 304661 na Scaffold_273 unplaced-scaffold na na JBLNKG010000040.1 <> na Primary Assembly 301266 na Scaffold_274 unplaced-scaffold na na JBLNKG010000041.1 <> na Primary Assembly 286495 na Scaffold_275 unplaced-scaffold na na JBLNKG010000043.1 <> na Primary Assembly 247814 na Scaffold_276 unplaced-scaffold na na JBLNKG010000044.1 <> na Primary Assembly 238504 na Scaffold_277 unplaced-scaffold na na JBLNKG010000045.1 <> na Primary Assembly 223859 na Scaffold_278 unplaced-scaffold na na JBLNKG010000046.1 <> na Primary Assembly 220310 na Scaffold_279 unplaced-scaffold na na JBLNKG010000047.1 <> na Primary Assembly 218841 na Scaffold_280 unplaced-scaffold na na JBLNKG010000048.1 <> na Primary Assembly 216621 na Scaffold_281 unplaced-scaffold na na JBLNKG010000050.1 <> na Primary Assembly 199098 na Scaffold_282 unplaced-scaffold na na JBLNKG010000052.1 <> na Primary Assembly 190666 na Scaffold_283 unplaced-scaffold na na JBLNKG010000053.1 <> na Primary Assembly 190606 na Scaffold_284 unplaced-scaffold na na JBLNKG010000054.1 <> na Primary Assembly 171936 na Scaffold_285 unplaced-scaffold na na JBLNKG010000055.1 <> na Primary Assembly 168994 na Scaffold_286 unplaced-scaffold na na JBLNKG010000056.1 <> na Primary Assembly 168827 na Scaffold_287 unplaced-scaffold na na JBLNKG010000057.1 <> na Primary Assembly 166100 na Scaffold_288 unplaced-scaffold na na JBLNKG010000058.1 <> na Primary Assembly 165357 na Scaffold_289 unplaced-scaffold na na JBLNKG010000059.1 <> na Primary Assembly 159737 na Scaffold_290 unplaced-scaffold na na JBLNKG010000060.1 <> na Primary Assembly 159032 na Scaffold_291 unplaced-scaffold na na JBLNKG010000061.1 <> na Primary Assembly 153742 na Scaffold_292 unplaced-scaffold na na JBLNKG010000062.1 <> na Primary Assembly 146691 na Scaffold_293 unplaced-scaffold na na JBLNKG010000064.1 <> na Primary Assembly 141900 na Scaffold_294 unplaced-scaffold na na JBLNKG010000065.1 <> na Primary Assembly 140099 na Scaffold_295 unplaced-scaffold na na JBLNKG010000066.1 <> na Primary Assembly 139694 na Scaffold_296 unplaced-scaffold na na JBLNKG010000067.1 <> na Primary Assembly 138831 na Scaffold_297 unplaced-scaffold na na JBLNKG010000068.1 <> na Primary Assembly 137950 na Scaffold_298 unplaced-scaffold na na JBLNKG010000069.1 <> na Primary Assembly 131137 na Scaffold_299 unplaced-scaffold na na JBLNKG010000070.1 <> na Primary Assembly 127715 na Scaffold_300 unplaced-scaffold na na JBLNKG010000071.1 <> na Primary Assembly 127419 na Scaffold_301 unplaced-scaffold na na JBLNKG010000072.1 <> na Primary Assembly 124264 na Scaffold_302 unplaced-scaffold na na JBLNKG010000073.1 <> na Primary Assembly 120717 na Scaffold_303 unplaced-scaffold na na JBLNKG010000074.1 <> na Primary Assembly 115496 na Scaffold_304 unplaced-scaffold na na JBLNKG010000075.1 <> na Primary Assembly 110715 na Scaffold_305 unplaced-scaffold na na JBLNKG010000076.1 <> na Primary Assembly 107456 na Scaffold_306 unplaced-scaffold na na JBLNKG010000077.1 <> na Primary Assembly 107226 na Scaffold_307 unplaced-scaffold na na JBLNKG010000078.1 <> na Primary Assembly 105755 na Scaffold_308 unplaced-scaffold na na JBLNKG010000079.1 <> na Primary Assembly 105664 na Scaffold_309 unplaced-scaffold na na JBLNKG010000080.1 <> na Primary Assembly 104499 na Scaffold_310 unplaced-scaffold na na JBLNKG010000081.1 <> na Primary Assembly 104272 na Scaffold_311 unplaced-scaffold na na JBLNKG010000082.1 <> na Primary Assembly 95731 na Scaffold_312 unplaced-scaffold na na JBLNKG010000083.1 <> na Primary Assembly 92644 na Scaffold_313 unplaced-scaffold na na JBLNKG010000084.1 <> na Primary Assembly 90968 na Scaffold_314 unplaced-scaffold na na JBLNKG010000085.1 <> na Primary Assembly 90384 na Scaffold_315 unplaced-scaffold na na JBLNKG010000086.1 <> na Primary Assembly 89438 na Scaffold_316 unplaced-scaffold na na JBLNKG010000087.1 <> na Primary Assembly 88237 na Scaffold_317 unplaced-scaffold na na JBLNKG010000088.1 <> na Primary Assembly 86685 na Scaffold_318 unplaced-scaffold na na JBLNKG010000089.1 <> na Primary Assembly 85116 na Scaffold_319 unplaced-scaffold na na JBLNKG010000090.1 <> na Primary Assembly 80303 na Scaffold_320 unplaced-scaffold na na JBLNKG010000091.1 <> na Primary Assembly 79957 na Scaffold_321 unplaced-scaffold na na JBLNKG010000092.1 <> na Primary Assembly 77954 na Scaffold_322 unplaced-scaffold na na JBLNKG010000093.1 <> na Primary Assembly 77570 na Scaffold_323 unplaced-scaffold na na JBLNKG010000094.1 <> na Primary Assembly 77062 na Scaffold_324 unplaced-scaffold na na JBLNKG010000095.1 <> na Primary Assembly 76248 na Scaffold_325 unplaced-scaffold na na JBLNKG010000096.1 <> na Primary Assembly 74081 na Scaffold_326 unplaced-scaffold na na JBLNKG010000097.1 <> na Primary Assembly 73701 na Scaffold_327 unplaced-scaffold na na JBLNKG010000098.1 <> na Primary Assembly 73669 na Scaffold_328 unplaced-scaffold na na JBLNKG010000099.1 <> na Primary Assembly 73179 na Scaffold_329 unplaced-scaffold na na JBLNKG010000100.1 <> na Primary Assembly 72733 na Scaffold_330 unplaced-scaffold na na JBLNKG010000101.1 <> na Primary Assembly 70309 na Scaffold_331 unplaced-scaffold na na JBLNKG010000102.1 <> na Primary Assembly 70040 na Scaffold_332 unplaced-scaffold na na JBLNKG010000103.1 <> na Primary Assembly 69134 na Scaffold_333 unplaced-scaffold na na JBLNKG010000104.1 <> na Primary Assembly 68893 na Scaffold_334 unplaced-scaffold na na JBLNKG010000105.1 <> na Primary Assembly 67629 na Scaffold_335 unplaced-scaffold na na JBLNKG010000106.1 <> na Primary Assembly 65343 na Scaffold_336 unplaced-scaffold na na JBLNKG010000107.1 <> na Primary Assembly 64314 na Scaffold_337 unplaced-scaffold na na JBLNKG010000108.1 <> na Primary Assembly 63461 na Scaffold_338 unplaced-scaffold na na JBLNKG010000109.1 <> na Primary Assembly 62418 na Scaffold_339 unplaced-scaffold na na JBLNKG010000110.1 <> na Primary Assembly 62120 na Scaffold_340 unplaced-scaffold na na JBLNKG010000111.1 <> na Primary Assembly 61241 na Scaffold_341 unplaced-scaffold na na JBLNKG010000112.1 <> na Primary Assembly 59328 na Scaffold_342 unplaced-scaffold na na JBLNKG010000113.1 <> na Primary Assembly 58669 na Scaffold_343 unplaced-scaffold na na JBLNKG010000114.1 <> na Primary Assembly 58576 na Scaffold_344 unplaced-scaffold na na JBLNKG010000115.1 <> na Primary Assembly 57804 na Scaffold_345 unplaced-scaffold na na JBLNKG010000116.1 <> na Primary Assembly 57241 na Scaffold_811 unplaced-scaffold na na JBLNKG010000117.1 <> na Primary Assembly 57149 na Scaffold_346 unplaced-scaffold na na JBLNKG010000118.1 <> na Primary Assembly 55270 na Scaffold_347 unplaced-scaffold na na JBLNKG010000119.1 <> na Primary Assembly 55010 na Scaffold_348 unplaced-scaffold na na JBLNKG010000120.1 <> na Primary Assembly 53805 na Scaffold_349 unplaced-scaffold na na JBLNKG010000121.1 <> na Primary Assembly 52748 na Scaffold_350 unplaced-scaffold na na JBLNKG010000122.1 <> na Primary Assembly 50983 na Scaffold_351 unplaced-scaffold na na JBLNKG010000123.1 <> na Primary Assembly 50354 na Scaffold_818 unplaced-scaffold na na JBLNKG010000124.1 <> na Primary Assembly 50327 na Scaffold_352 unplaced-scaffold na na JBLNKG010000125.1 <> na Primary Assembly 50283 na Scaffold_353 unplaced-scaffold na na JBLNKG010000126.1 <> na Primary Assembly 50256 na Scaffold_354 unplaced-scaffold na na JBLNKG010000127.1 <> na Primary Assembly 50085 na Scaffold_355 unplaced-scaffold na na JBLNKG010000128.1 <> na Primary Assembly 49562 na Scaffold_823 unplaced-scaffold na na JBLNKG010000129.1 <> na Primary Assembly 48746 na Scaffold_356 unplaced-scaffold na na JBLNKG010000130.1 <> na Primary Assembly 47594 na Scaffold_357 unplaced-scaffold na na JBLNKG010000131.1 <> na Primary Assembly 46922 na Scaffold_358 unplaced-scaffold na na JBLNKG010000132.1 <> na Primary Assembly 44828 na Scaffold_827 unplaced-scaffold na na JBLNKG010000133.1 <> na Primary Assembly 44433 na Scaffold_359 unplaced-scaffold na na JBLNKG010000134.1 <> na Primary Assembly 44366 na Scaffold_360 unplaced-scaffold na na JBLNKG010000135.1 <> na Primary Assembly 44297 na Scaffold_361 unplaced-scaffold na na JBLNKG010000136.1 <> na Primary Assembly 44071 na Scaffold_831 unplaced-scaffold na na JBLNKG010000137.1 <> na Primary Assembly 43852 na Scaffold_362 unplaced-scaffold na na JBLNKG010000138.1 <> na Primary Assembly 42913 na Scaffold_363 unplaced-scaffold na na JBLNKG010000139.1 <> na Primary Assembly 42334 na Scaffold_834 unplaced-scaffold na na JBLNKG010000140.1 <> na Primary Assembly 42050 na Scaffold_364 unplaced-scaffold na na JBLNKG010000141.1 <> na Primary Assembly 41862 na Scaffold_365 unplaced-scaffold na na JBLNKG010000142.1 <> na Primary Assembly 41008 na Scaffold_837 unplaced-scaffold na na JBLNKG010000143.1 <> na Primary Assembly 37366 na Scaffold_366 unplaced-scaffold na na JBLNKG010000144.1 <> na Primary Assembly 37286 na Scaffold_839 unplaced-scaffold na na JBLNKG010000145.1 <> na Primary Assembly 36328 na Scaffold_367 unplaced-scaffold na na JBLNKG010000146.1 <> na Primary Assembly 35747 na Scaffold_368 unplaced-scaffold na na JBLNKG010000147.1 <> na Primary Assembly 35343 na Scaffold_842 unplaced-scaffold na na JBLNKG010000148.1 <> na Primary Assembly 35193 na Scaffold_369 unplaced-scaffold na na JBLNKG010000149.1 <> na Primary Assembly 33631 na Scaffold_844 unplaced-scaffold na na JBLNKG010000150.1 <> na Primary Assembly 32581 na Scaffold_370 unplaced-scaffold na na JBLNKG010000151.1 <> na Primary Assembly 32562 na Scaffold_846 unplaced-scaffold na na JBLNKG010000152.1 <> na Primary Assembly 32232 na Scaffold_371 unplaced-scaffold na na JBLNKG010000153.1 <> na Primary Assembly 32143 na Scaffold_848 unplaced-scaffold na na JBLNKG010000154.1 <> na Primary Assembly 31482 na Scaffold_372 unplaced-scaffold na na JBLNKG010000155.1 <> na Primary Assembly 31134 na Scaffold_850 unplaced-scaffold na na JBLNKG010000156.1 <> na Primary Assembly 30768 na Scaffold_373 unplaced-scaffold na na JBLNKG010000157.1 <> na Primary Assembly 30046 na Scaffold_852 unplaced-scaffold na na JBLNKG010000158.1 <> na Primary Assembly 29836 na Scaffold_374 unplaced-scaffold na na JBLNKG010000159.1 <> na Primary Assembly 29709 na Scaffold_854 unplaced-scaffold na na JBLNKG010000160.1 <> na Primary Assembly 29617 na Scaffold_375 unplaced-scaffold na na JBLNKG010000161.1 <> na Primary Assembly 29093 na Scaffold_856 unplaced-scaffold na na JBLNKG010000162.1 <> na Primary Assembly 28849 na Scaffold_376 unplaced-scaffold na na JBLNKG010000163.1 <> na Primary Assembly 28432 na Scaffold_858 unplaced-scaffold na na JBLNKG010000164.1 <> na Primary Assembly 27280 na Scaffold_377 unplaced-scaffold na na JBLNKG010000165.1 <> na Primary Assembly 24739 na Scaffold_860 unplaced-scaffold na na JBLNKG010000166.1 <> na Primary Assembly 24411 na Scaffold_861 unplaced-scaffold na na JBLNKG010000167.1 <> na Primary Assembly 21542 na Scaffold_378 unplaced-scaffold na na JBLNKG010000168.1 <> na Primary Assembly 21358 na Scaffold_863 unplaced-scaffold na na JBLNKG010000169.1 <> na Primary Assembly 20159 na Scaffold_864 unplaced-scaffold na na JBLNKG010000170.1 <> na Primary Assembly 18977 na Scaffold_379 unplaced-scaffold na na JBLNKG010000171.1 <> na Primary Assembly 15932 na