# Assembly name: fLutSeb1.hap1.cur.20230516 # Organism name: Lutjanus sebae (emperor red snapper) # Infraspecific name: ecotype=12 # Isolate: fLutSeb1 # Taxid: 232192 # BioSample: SAMN41179602 # BioProject: PRJNA1101483 # Submitter: Minderoo OceanOmics Centre at University of the Western Australia # Date: 2026-07-21 # Assembly type: haploid (haplotype 1) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JBLNJZ01 # Assembly method: HiFiasm v. 0.9.8 # Expected final version: Yes # Genome coverage: 50x # Sequencing technology: PacBio Sequel; Illumina NovaSeq # RefSeq category: Reference Genome # GenBank assembly accession: GCA_059550175.1 # Linked assembly: GCA_059550155.1 (haplotype 2) # ## Assembly-Unit names: ## Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name SUPER_1 assembled-molecule 1 Chromosome CM183719.1 <> na Primary Assembly 50950218 na SUPER_2 assembled-molecule 2 Chromosome CM183720.1 <> na Primary Assembly 50827588 na SUPER_3 assembled-molecule 3 Chromosome CM183721.1 <> na Primary Assembly 50489386 na SUPER_4 assembled-molecule 4 Chromosome CM183722.1 <> na Primary Assembly 50468777 na SUPER_5 assembled-molecule 5 Chromosome CM183723.1 <> na Primary Assembly 44990584 na SUPER_6 assembled-molecule 6 Chromosome CM183724.1 <> na Primary Assembly 44693429 na SUPER_7 assembled-molecule 7 Chromosome CM183725.1 <> na Primary Assembly 44201814 na SUPER_8 assembled-molecule 8 Chromosome CM183726.1 <> na Primary Assembly 44168791 na SUPER_9 assembled-molecule 9 Chromosome CM183727.1 <> na Primary Assembly 44163634 na SUPER_10 assembled-molecule 10 Chromosome CM183728.1 <> na Primary Assembly 44079956 na SUPER_11 assembled-molecule 11 Chromosome CM183729.1 <> na Primary Assembly 42307570 na SUPER_12 assembled-molecule 12 Chromosome CM183730.1 <> na Primary Assembly 42106121 na SUPER_13 assembled-molecule 13 Chromosome CM183731.1 <> na Primary Assembly 41335957 na SUPER_14 assembled-molecule 14 Chromosome CM183732.1 <> na Primary Assembly 40303840 na SUPER_15 assembled-molecule 15 Chromosome CM183733.1 <> na Primary Assembly 40218686 na SUPER_16 assembled-molecule 16 Chromosome CM183734.1 <> na Primary Assembly 39696593 na SUPER_17 assembled-molecule 17 Chromosome CM183735.1 <> na Primary Assembly 39305364 na SUPER_18 assembled-molecule 18 Chromosome CM183736.1 <> na Primary Assembly 36592708 na SUPER_19 assembled-molecule 19 Chromosome CM183737.1 <> na Primary Assembly 36128945 na SUPER_20 assembled-molecule 20 Chromosome CM183738.1 <> na Primary Assembly 34419215 na SUPER_21 assembled-molecule 21 Chromosome CM183739.1 <> na Primary Assembly 34417906 na SUPER_22 assembled-molecule 22 Chromosome CM183740.1 <> na Primary Assembly 30925791 na SUPER_23 assembled-molecule 23 Chromosome CM183741.1 <> na Primary Assembly 29824137 na SUPER_24 assembled-molecule 24 Chromosome CM183742.1 <> na Primary Assembly 20368278 na SUPER_4_unloc_1 unlocalized-scaffold 4 Chromosome JBLNJZ010000068.1 <> na Primary Assembly 95542 na SUPER_16_unloc_1 unlocalized-scaffold 16 Chromosome JBLNJZ010000040.1 <> na Primary Assembly 178429 na SUPER_19_unloc_1 unlocalized-scaffold 19 Chromosome JBLNJZ010000038.1 <> na Primary Assembly 205592 na SUPER_21_unloc_1 unlocalized-scaffold 21 Chromosome JBLNJZ010000032.1 <> na Primary Assembly 278644 na SUPER_21_unloc_2 unlocalized-scaffold 21 Chromosome JBLNJZ010000043.1 <> na Primary Assembly 170270 na Scaffold_49 unplaced-scaffold na na JBLNJZ010000025.1 <> na Primary Assembly 566937 na Scaffold_50 unplaced-scaffold na na JBLNJZ010000026.1 <> na Primary Assembly 366887 na Scaffold_51 unplaced-scaffold na na JBLNJZ010000027.1 <> na Primary Assembly 322575 na Scaffold_52 unplaced-scaffold na na JBLNJZ010000028.1 <> na Primary Assembly 310560 na Scaffold_53 unplaced-scaffold na na JBLNJZ010000029.1 <> na Primary Assembly 305206 na Scaffold_54 unplaced-scaffold na na JBLNJZ010000030.1 <> na Primary Assembly 290946 na Scaffold_55 unplaced-scaffold na na JBLNJZ010000031.1 <> na Primary Assembly 279330 na Scaffold_56 unplaced-scaffold na na JBLNJZ010000033.1 <> na Primary Assembly 263530 na Scaffold_57 unplaced-scaffold na na JBLNJZ010000034.1 <> na Primary Assembly 263229 na Scaffold_58 unplaced-scaffold na na JBLNJZ010000035.1 <> na Primary Assembly 249625 na Scaffold_59 unplaced-scaffold na na JBLNJZ010000036.1 <> na Primary Assembly 228720 na Scaffold_60 unplaced-scaffold na na JBLNJZ010000037.1 <> na Primary Assembly 219845 na Scaffold_61 unplaced-scaffold na na JBLNJZ010000039.1 <> na Primary Assembly 179123 na Scaffold_62 unplaced-scaffold na na JBLNJZ010000041.1 <> na Primary Assembly 176333 na Scaffold_63 unplaced-scaffold na na JBLNJZ010000042.1 <> na Primary Assembly 174577 na Scaffold_64 unplaced-scaffold na na JBLNJZ010000044.1 <> na Primary Assembly 158852 na Scaffold_65 unplaced-scaffold na na JBLNJZ010000045.1 <> na Primary Assembly 158432 na Scaffold_66 unplaced-scaffold na na JBLNJZ010000046.1 <> na Primary Assembly 156873 na Scaffold_67 unplaced-scaffold na na JBLNJZ010000047.1 <> na Primary Assembly 154140 na Scaffold_68 unplaced-scaffold na na JBLNJZ010000048.1 <> na Primary Assembly 151501 na Scaffold_69 unplaced-scaffold na na JBLNJZ010000049.1 <> na Primary Assembly 141850 na Scaffold_70 unplaced-scaffold na na JBLNJZ010000050.1 <> na Primary Assembly 139836 na Scaffold_71 unplaced-scaffold na na JBLNJZ010000051.1 <> na Primary Assembly 138754 na Scaffold_72 unplaced-scaffold na na JBLNJZ010000052.1 <> na Primary Assembly 129963 na Scaffold_73 unplaced-scaffold na na JBLNJZ010000053.1 <> na Primary Assembly 129841 na Scaffold_74 unplaced-scaffold na na JBLNJZ010000054.1 <> na Primary Assembly 125093 na Scaffold_75 unplaced-scaffold na na JBLNJZ010000055.1 <> na Primary Assembly 122779 na Scaffold_76 unplaced-scaffold na na JBLNJZ010000056.1 <> na Primary Assembly 121996 na Scaffold_77 unplaced-scaffold na na JBLNJZ010000057.1 <> na Primary Assembly 121592 na Scaffold_78 unplaced-scaffold na na JBLNJZ010000058.1 <> na Primary Assembly 118988 na Scaffold_79 unplaced-scaffold na na JBLNJZ010000059.1 <> na Primary Assembly 113877 na Scaffold_80 unplaced-scaffold na na JBLNJZ010000060.1 <> na Primary Assembly 113603 na Scaffold_81 unplaced-scaffold na na JBLNJZ010000061.1 <> na Primary Assembly 112925 na Scaffold_82 unplaced-scaffold na na JBLNJZ010000062.1 <> na Primary Assembly 109947 na Scaffold_83 unplaced-scaffold na na JBLNJZ010000063.1 <> na Primary Assembly 106278 na Scaffold_84 unplaced-scaffold na na JBLNJZ010000064.1 <> na Primary Assembly 105894 na Scaffold_85 unplaced-scaffold na na JBLNJZ010000065.1 <> na Primary Assembly 98449 na Scaffold_86 unplaced-scaffold na na JBLNJZ010000066.1 <> na Primary Assembly 97146 na Scaffold_87 unplaced-scaffold na na JBLNJZ010000067.1 <> na Primary Assembly 96568 na Scaffold_88 unplaced-scaffold na na JBLNJZ010000069.1 <> na Primary Assembly 93152 na Scaffold_89 unplaced-scaffold na na JBLNJZ010000070.1 <> na Primary Assembly 92010 na Scaffold_90 unplaced-scaffold na na JBLNJZ010000071.1 <> na Primary Assembly 91036 na Scaffold_91 unplaced-scaffold na na JBLNJZ010000072.1 <> na Primary Assembly 89441 na Scaffold_92 unplaced-scaffold na na JBLNJZ010000073.1 <> na Primary Assembly 89060 na Scaffold_93 unplaced-scaffold na na JBLNJZ010000074.1 <> na Primary Assembly 86864 na Scaffold_94 unplaced-scaffold na na JBLNJZ010000075.1 <> na Primary Assembly 86286 na Scaffold_95 unplaced-scaffold na na JBLNJZ010000076.1 <> na Primary Assembly 85776 na Scaffold_96 unplaced-scaffold na na JBLNJZ010000077.1 <> na Primary Assembly 84290 na Scaffold_97 unplaced-scaffold na na JBLNJZ010000078.1 <> na Primary Assembly 82774 na Scaffold_98 unplaced-scaffold na na JBLNJZ010000079.1 <> na Primary Assembly 80333 na Scaffold_99 unplaced-scaffold na na JBLNJZ010000080.1 <> na Primary Assembly 79775 na Scaffold_100 unplaced-scaffold na na JBLNJZ010000081.1 <> na Primary Assembly 75382 na Scaffold_101 unplaced-scaffold na na JBLNJZ010000082.1 <> na Primary Assembly 71841 na Scaffold_102 unplaced-scaffold na na JBLNJZ010000083.1 <> na Primary Assembly 70602 na Scaffold_103 unplaced-scaffold na na JBLNJZ010000084.1 <> na Primary Assembly 70355 na Scaffold_104 unplaced-scaffold na na JBLNJZ010000085.1 <> na Primary Assembly 68706 na Scaffold_105 unplaced-scaffold na na JBLNJZ010000086.1 <> na Primary Assembly 68299 na Scaffold_106 unplaced-scaffold na na JBLNJZ010000087.1 <> na Primary Assembly 66644 na Scaffold_107 unplaced-scaffold na na JBLNJZ010000088.1 <> na Primary Assembly 66416 na Scaffold_108 unplaced-scaffold na na JBLNJZ010000089.1 <> na Primary Assembly 66024 na Scaffold_109 unplaced-scaffold na na JBLNJZ010000090.1 <> na Primary Assembly 65217 na Scaffold_110 unplaced-scaffold na na JBLNJZ010000091.1 <> na Primary Assembly 64613 na Scaffold_111 unplaced-scaffold na na JBLNJZ010000092.1 <> na Primary Assembly 63880 na Scaffold_112 unplaced-scaffold na na JBLNJZ010000093.1 <> na Primary Assembly 61137 na Scaffold_113 unplaced-scaffold na na JBLNJZ010000094.1 <> na Primary Assembly 60895 na Scaffold_114 unplaced-scaffold na na JBLNJZ010000095.1 <> na Primary Assembly 60711 na Scaffold_115 unplaced-scaffold na na JBLNJZ010000096.1 <> na Primary Assembly 60116 na Scaffold_116 unplaced-scaffold na na JBLNJZ010000097.1 <> na Primary Assembly 58960 na Scaffold_117 unplaced-scaffold na na JBLNJZ010000098.1 <> na Primary Assembly 58959 na Scaffold_118 unplaced-scaffold na na JBLNJZ010000099.1 <> na Primary Assembly 57244 na Scaffold_119 unplaced-scaffold na na JBLNJZ010000100.1 <> na Primary Assembly 54820 na Scaffold_120 unplaced-scaffold na na JBLNJZ010000101.1 <> na Primary Assembly 54750 na Scaffold_121 unplaced-scaffold na na JBLNJZ010000102.1 <> na Primary Assembly 54447 na Scaffold_122 unplaced-scaffold na na JBLNJZ010000103.1 <> na Primary Assembly 52559 na Scaffold_123 unplaced-scaffold na na JBLNJZ010000104.1 <> na Primary Assembly 48587 na Scaffold_124 unplaced-scaffold na na JBLNJZ010000105.1 <> na Primary Assembly 47986 na Scaffold_337 unplaced-scaffold na na JBLNJZ010000106.1 <> na Primary Assembly 45808 na Scaffold_125 unplaced-scaffold na na JBLNJZ010000107.1 <> na Primary Assembly 45156 na Scaffold_126 unplaced-scaffold na na JBLNJZ010000108.1 <> na Primary Assembly 44636 na Scaffold_127 unplaced-scaffold na na JBLNJZ010000109.1 <> na Primary Assembly 44348 na Scaffold_341 unplaced-scaffold na na JBLNJZ010000110.1 <> na Primary Assembly 43420 na Scaffold_128 unplaced-scaffold na na JBLNJZ010000111.1 <> na Primary Assembly 43333 na Scaffold_129 unplaced-scaffold na na JBLNJZ010000112.1 <> na Primary Assembly 42753 na Scaffold_344 unplaced-scaffold na na JBLNJZ010000113.1 <> na Primary Assembly 42573 na Scaffold_130 unplaced-scaffold na na JBLNJZ010000114.1 <> na Primary Assembly 42517 na Scaffold_131 unplaced-scaffold na na JBLNJZ010000115.1 <> na Primary Assembly 42396 na Scaffold_347 unplaced-scaffold na na JBLNJZ010000116.1 <> na Primary Assembly 42320 na Scaffold_132 unplaced-scaffold na na JBLNJZ010000117.1 <> na Primary Assembly 41359 na Scaffold_133 unplaced-scaffold na na JBLNJZ010000118.1 <> na Primary Assembly 39147 na Scaffold_350 unplaced-scaffold na na JBLNJZ010000119.1 <> na Primary Assembly 39106 na Scaffold_134 unplaced-scaffold na na JBLNJZ010000120.1 <> na Primary Assembly 38641 na Scaffold_135 unplaced-scaffold na na JBLNJZ010000121.1 <> na Primary Assembly 38390 na Scaffold_353 unplaced-scaffold na na JBLNJZ010000122.1 <> na Primary Assembly 38263 na Scaffold_136 unplaced-scaffold na na JBLNJZ010000123.1 <> na Primary Assembly 37989 na Scaffold_137 unplaced-scaffold na na JBLNJZ010000124.1 <> na Primary Assembly 37422 na Scaffold_356 unplaced-scaffold na na JBLNJZ010000125.1 <> na Primary Assembly 37403 na Scaffold_138 unplaced-scaffold na na JBLNJZ010000126.1 <> na Primary Assembly 36798 na Scaffold_358 unplaced-scaffold na na JBLNJZ010000127.1 <> na Primary Assembly 36447 na Scaffold_139 unplaced-scaffold na na JBLNJZ010000128.1 <> na Primary Assembly 35970 na Scaffold_140 unplaced-scaffold na na JBLNJZ010000129.1 <> na Primary Assembly 34539 na Scaffold_361 unplaced-scaffold na na JBLNJZ010000130.1 <> na Primary Assembly 34472 na Scaffold_141 unplaced-scaffold na na JBLNJZ010000131.1 <> na Primary Assembly 33796 na Scaffold_363 unplaced-scaffold na na JBLNJZ010000132.1 <> na Primary Assembly 32610 na Scaffold_142 unplaced-scaffold na na JBLNJZ010000133.1 <> na Primary Assembly 31657 na Scaffold_365 unplaced-scaffold na na JBLNJZ010000134.1 <> na Primary Assembly 31342 na Scaffold_143 unplaced-scaffold na na JBLNJZ010000135.1 <> na Primary Assembly 31244 na Scaffold_367 unplaced-scaffold na na JBLNJZ010000136.1 <> na Primary Assembly 30682 na Scaffold_144 unplaced-scaffold na na JBLNJZ010000137.1 <> na Primary Assembly 29681 na Scaffold_369 unplaced-scaffold na na JBLNJZ010000138.1 <> na Primary Assembly 29490 na Scaffold_145 unplaced-scaffold na na JBLNJZ010000139.1 <> na Primary Assembly 28966 na Scaffold_371 unplaced-scaffold na na JBLNJZ010000140.1 <> na Primary Assembly 28907 na Scaffold_146 unplaced-scaffold na na JBLNJZ010000141.1 <> na Primary Assembly 28756 na Scaffold_373 unplaced-scaffold na na JBLNJZ010000142.1 <> na Primary Assembly 28021 na Scaffold_147 unplaced-scaffold na na JBLNJZ010000143.1 <> na Primary Assembly 27875 na Scaffold_375 unplaced-scaffold na na JBLNJZ010000144.1 <> na Primary Assembly 27746 na Scaffold_148 unplaced-scaffold na na JBLNJZ010000145.1 <> na Primary Assembly 26936 na Scaffold_377 unplaced-scaffold na na JBLNJZ010000146.1 <> na Primary Assembly 25421 na Scaffold_378 unplaced-scaffold na na JBLNJZ010000147.1 <> na Primary Assembly 24943 na Scaffold_149 unplaced-scaffold na na JBLNJZ010000148.1 <> na Primary Assembly 24614 na Scaffold_380 unplaced-scaffold na na JBLNJZ010000149.1 <> na Primary Assembly 23479 na Scaffold_150 unplaced-scaffold na na JBLNJZ010000150.1 <> na Primary Assembly 23415 na Scaffold_382 unplaced-scaffold na na JBLNJZ010000151.1 <> na Primary Assembly 22938 na Scaffold_383 unplaced-scaffold na na JBLNJZ010000152.1 <> na Primary Assembly 22771 na Scaffold_151 unplaced-scaffold na na JBLNJZ010000153.1 <> na Primary Assembly 22555 na Scaffold_385 unplaced-scaffold na na JBLNJZ010000154.1 <> na Primary Assembly 20134 na Scaffold_386 unplaced-scaffold na na JBLNJZ010000155.1 <> na Primary Assembly 19462 na Scaffold_152 unplaced-scaffold na na JBLNJZ010000156.1 <> na Primary Assembly 18209 na Scaffold_388 unplaced-scaffold na na JBLNJZ010000157.1 <> na Primary Assembly 17153 na Scaffold_389 unplaced-scaffold na na JBLNJZ010000158.1 <> na Primary Assembly 17032 na Scaffold_153 unplaced-scaffold na na JBLNJZ010000159.1 <> na Primary Assembly 16772 na Scaffold_391 unplaced-scaffold na na JBLNJZ010000160.1 <> na Primary Assembly 16754 na Scaffold_392 unplaced-scaffold na na JBLNJZ010000161.1 <> na Primary Assembly 15858 na Scaffold_393 unplaced-scaffold na na JBLNJZ010000162.1 <> na Primary Assembly 15466 na Scaffold_154 unplaced-scaffold na na JBLNJZ010000163.1 <> na Primary Assembly 14796 na Scaffold_395 unplaced-scaffold na na JBLNJZ010000164.1 <> na Primary Assembly 14651 na Scaffold_396 unplaced-scaffold na na JBLNJZ010000165.1 <> na Primary Assembly 11943 na Scaffold_397 unplaced-scaffold na na JBLNJZ010000166.1 <> na Primary Assembly 11739 na Scaffold_398 unplaced-scaffold na na JBLNJZ010000167.1 <> na Primary Assembly 11281 na Scaffold_155 unplaced-scaffold na na JBLNJZ010000168.1 <> na Primary Assembly 11108 na