# Assembly name: bButSun1.hap1 # Organism name: Butorides sundevalli (birds) # Isolate: bButSun1 # Sex: male # Taxid: 2767357 # BioSample: SAMN59337214 # BioProject: PRJNA1463294 # Submitter: Vertebrate Genomes Project # Date: 2026-06-01 # Assembly type: haploid (haplotype 1) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JBYQUM01 # Assembly method: Hifiasm + Hi-C phasing v. 0.25.0 + galaxy3; yahs v. 1.2a.2 + galaxy3 # Expected final version: No # Genome coverage: 67.77x # Sequencing technology: PacBio Revio HiFi; Arima Hi-C v2 # GenBank assembly accession: GCA_057816235.1 # Linked assembly: GCA_057816225.1 (haplotype 2) # ## Assembly-Unit names: ## Primary Assembly ## non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name SUPER_1 assembled-molecule 1 Chromosome CM174275.1 <> na Primary Assembly 220864300 na SUPER_2 assembled-molecule 2 Chromosome CM174276.1 <> na Primary Assembly 169363098 na SUPER_3 assembled-molecule 3 Chromosome CM174277.1 <> na Primary Assembly 129722904 na SUPER_4 assembled-molecule 4 Chromosome CM174278.1 <> na Primary Assembly 84146035 na SUPER_5 assembled-molecule 5 Chromosome CM174279.1 <> na Primary Assembly 82389055 na SUPER_6 assembled-molecule 6 Chromosome CM174280.1 <> na Primary Assembly 74112709 na SUPER_7 assembled-molecule 7 Chromosome CM174281.1 <> na Primary Assembly 52274050 na SUPER_8 assembled-molecule 8 Chromosome CM174282.1 <> na Primary Assembly 49965803 na SUPER_9 assembled-molecule 9 Chromosome CM174283.1 <> na Primary Assembly 41310035 na SUPER_10 assembled-molecule 10 Chromosome CM174284.1 <> na Primary Assembly 39494604 na SUPER_11 assembled-molecule 11 Chromosome CM174285.1 <> na Primary Assembly 28309375 na SUPER_12 assembled-molecule 12 Chromosome CM174286.1 <> na Primary Assembly 24404582 na SUPER_13 assembled-molecule 13 Chromosome CM174287.1 <> na Primary Assembly 23464317 na SUPER_14 assembled-molecule 14 Chromosome CM174288.1 <> na Primary Assembly 23068461 na SUPER_15 assembled-molecule 15 Chromosome CM174289.1 <> na Primary Assembly 20970896 na SUPER_16 assembled-molecule 16 Chromosome CM174290.1 <> na Primary Assembly 20282071 na SUPER_17 assembled-molecule 17 Chromosome CM174291.1 <> na Primary Assembly 9584599 na SUPER_18 assembled-molecule 18 Chromosome CM174292.1 <> na Primary Assembly 9295118 na SUPER_19 assembled-molecule 19 Chromosome CM174293.1 <> na Primary Assembly 8954725 na SUPER_20 assembled-molecule 20 Chromosome CM174294.1 <> na Primary Assembly 7757673 na SUPER_21 assembled-molecule 21 Chromosome CM174295.1 <> na Primary Assembly 6921447 na SUPER_22 assembled-molecule 22 Chromosome CM174296.1 <> na Primary Assembly 4950121 na SUPER_23 assembled-molecule 23 Chromosome CM174297.1 <> na Primary Assembly 4779131 na SUPER_24 assembled-molecule 24 Chromosome CM174298.1 <> na Primary Assembly 4319693 na SUPER_25 assembled-molecule 25 Chromosome CM174299.1 <> na Primary Assembly 2296084 na SUPER_26 assembled-molecule 26 Chromosome CM174300.1 <> na Primary Assembly 1986758 na SUPER_27 assembled-molecule 27 Chromosome CM174301.1 <> na Primary Assembly 1824248 na SUPER_28 assembled-molecule 28 Chromosome CM174302.1 <> na Primary Assembly 1745850 na SUPER_29 assembled-molecule 29 Chromosome CM174303.1 <> na Primary Assembly 1405692 na SUPER_30 assembled-molecule 30 Chromosome CM174304.1 <> na Primary Assembly 1201114 na SUPER_Z assembled-molecule Z Chromosome CM174305.1 <> na Primary Assembly 86604219 na SUPER_1_unloc_1 unlocalized-scaffold 1 Chromosome JBYQUM010000066.1 <> na Primary Assembly 130495 na Scaffold_72 unplaced-scaffold na na JBYQUM010000028.1 <> na Primary Assembly 2062541 na Scaffold_73 unplaced-scaffold na na JBYQUM010000032.1 <> na Primary Assembly 1744424 na Scaffold_76 unplaced-scaffold na na JBYQUM010000035.1 <> na Primary Assembly 1028755 na Scaffold_77 unplaced-scaffold na na JBYQUM010000036.1 <> na Primary Assembly 1014606 na Scaffold_79 unplaced-scaffold na na JBYQUM010000037.1 <> na Primary Assembly 766731 na Scaffold_83 unplaced-scaffold na na JBYQUM010000038.1 <> na Primary Assembly 595212 na Scaffold_84 unplaced-scaffold na na JBYQUM010000039.1 <> na Primary Assembly 553919 na Scaffold_90 unplaced-scaffold na na JBYQUM010000040.1 <> na Primary Assembly 506274 na Scaffold_91 unplaced-scaffold na na JBYQUM010000041.1 <> na Primary Assembly 461550 na Scaffold_92 unplaced-scaffold na na JBYQUM010000042.1 <> na Primary Assembly 452769 na Scaffold_93 unplaced-scaffold na na JBYQUM010000043.1 <> na Primary Assembly 441343 na Scaffold_94 unplaced-scaffold na na JBYQUM010000044.1 <> na Primary Assembly 436068 na Scaffold_99 unplaced-scaffold na na JBYQUM010000045.1 <> na Primary Assembly 347264 na Scaffold_101 unplaced-scaffold na na JBYQUM010000046.1 <> na Primary Assembly 312841 na Scaffold_102 unplaced-scaffold na na JBYQUM010000047.1 <> na Primary Assembly 307972 na Scaffold_109 unplaced-scaffold na na JBYQUM010000048.1 <> na Primary Assembly 277625 na Scaffold_110 unplaced-scaffold na na JBYQUM010000049.1 <> na Primary Assembly 251012 na Scaffold_113 unplaced-scaffold na na JBYQUM010000050.1 <> na Primary Assembly 213157 na Scaffold_114 unplaced-scaffold na na JBYQUM010000051.1 <> na Primary Assembly 206782 na Scaffold_63 unplaced-scaffold na na JBYQUM010000052.1 <> na Primary Assembly 204212 na Scaffold_116 unplaced-scaffold na na JBYQUM010000053.1 <> na Primary Assembly 203544 na Scaffold_118 unplaced-scaffold na na JBYQUM010000054.1 <> na Primary Assembly 200057 na Scaffold_108 unplaced-scaffold na na JBYQUM010000055.1 <> na Primary Assembly 187095 na Scaffold_68 unplaced-scaffold na na JBYQUM010000056.1 <> na Primary Assembly 179643 na Scaffold_66 unplaced-scaffold na na JBYQUM010000057.1 <> na Primary Assembly 179562 na Scaffold_121 unplaced-scaffold na na JBYQUM010000058.1 <> na Primary Assembly 172212 na Scaffold_124 unplaced-scaffold na na JBYQUM010000059.1 <> na Primary Assembly 164031 na Scaffold_128 unplaced-scaffold na na JBYQUM010000060.1 <> na Primary Assembly 149887 na Scaffold_131 unplaced-scaffold na na JBYQUM010000061.1 <> na Primary Assembly 148241 na Scaffold_132 unplaced-scaffold na na JBYQUM010000062.1 <> na Primary Assembly 145720 na Scaffold_64 unplaced-scaffold na na JBYQUM010000063.1 <> na Primary Assembly 144356 na Scaffold_133 unplaced-scaffold na na JBYQUM010000064.1 <> na Primary Assembly 143742 na Scaffold_135 unplaced-scaffold na na JBYQUM010000065.1 <> na Primary Assembly 139792 na Scaffold_138 unplaced-scaffold na na JBYQUM010000067.1 <> na Primary Assembly 127505 na Scaffold_139 unplaced-scaffold na na JBYQUM010000068.1 <> na Primary Assembly 126135 na Scaffold_140 unplaced-scaffold na na JBYQUM010000069.1 <> na Primary Assembly 124197 na Scaffold_141 unplaced-scaffold na na JBYQUM010000070.1 <> na Primary Assembly 123671 na Scaffold_144 unplaced-scaffold na na JBYQUM010000071.1 <> na Primary Assembly 109513 na Scaffold_145 unplaced-scaffold na na JBYQUM010000072.1 <> na Primary Assembly 109393 na Scaffold_146 unplaced-scaffold na na JBYQUM010000073.1 <> na Primary Assembly 109271 na Scaffold_147 unplaced-scaffold na na JBYQUM010000074.1 <> na Primary Assembly 109263 na Scaffold_148 unplaced-scaffold na na JBYQUM010000075.1 <> na Primary Assembly 108197 na Scaffold_150 unplaced-scaffold na na JBYQUM010000076.1 <> na Primary Assembly 107524 na Scaffold_155 unplaced-scaffold na na JBYQUM010000077.1 <> na Primary Assembly 103047 na Scaffold_156 unplaced-scaffold na na JBYQUM010000078.1 <> na Primary Assembly 99998 na Scaffold_158 unplaced-scaffold na na JBYQUM010000079.1 <> na Primary Assembly 97411 na Scaffold_164 unplaced-scaffold na na JBYQUM010000080.1 <> na Primary Assembly 92002 na Scaffold_168 unplaced-scaffold na na JBYQUM010000081.1 <> na Primary Assembly 86658 na Scaffold_175 unplaced-scaffold na na JBYQUM010000082.1 <> na Primary Assembly 75955 na Scaffold_176 unplaced-scaffold na na JBYQUM010000083.1 <> na Primary Assembly 74052 na Scaffold_177 unplaced-scaffold na na JBYQUM010000084.1 <> na Primary Assembly 73695 na Scaffold_178 unplaced-scaffold na na JBYQUM010000085.1 <> na Primary Assembly 73225 na Scaffold_180 unplaced-scaffold na na JBYQUM010000086.1 <> na Primary Assembly 72165 na Scaffold_183 unplaced-scaffold na na JBYQUM010000087.1 <> na Primary Assembly 71034 na Scaffold_185 unplaced-scaffold na na JBYQUM010000088.1 <> na Primary Assembly 69681 na Scaffold_186 unplaced-scaffold na na JBYQUM010000089.1 <> na Primary Assembly 69249 na Scaffold_189 unplaced-scaffold na na JBYQUM010000090.1 <> na Primary Assembly 66121 na Scaffold_191 unplaced-scaffold na na JBYQUM010000091.1 <> na Primary Assembly 63530 na Scaffold_285 unplaced-scaffold na na JBYQUM010000092.1 <> na Primary Assembly 62645 na Scaffold_193 unplaced-scaffold na na JBYQUM010000093.1 <> na Primary Assembly 61952 na Scaffold_195 unplaced-scaffold na na JBYQUM010000094.1 <> na Primary Assembly 61456 na Scaffold_196 unplaced-scaffold na na JBYQUM010000095.1 <> na Primary Assembly 60116 na Scaffold_197 unplaced-scaffold na na JBYQUM010000096.1 <> na Primary Assembly 58827 na Scaffold_198 unplaced-scaffold na na JBYQUM010000097.1 <> na Primary Assembly 58532 na Scaffold_199 unplaced-scaffold na na JBYQUM010000098.1 <> na Primary Assembly 57297 na Scaffold_292 unplaced-scaffold na na JBYQUM010000099.1 <> na Primary Assembly 56286 na Scaffold_201 unplaced-scaffold na na JBYQUM010000100.1 <> na Primary Assembly 56203 na Scaffold_203 unplaced-scaffold na na JBYQUM010000101.1 <> na Primary Assembly 53226 na Scaffold_252 unplaced-scaffold na na JBYQUM010000102.1 <> na Primary Assembly 50683 na Scaffold_205 unplaced-scaffold na na JBYQUM010000103.1 <> na Primary Assembly 49087 na Scaffold_254 unplaced-scaffold na na JBYQUM010000104.1 <> na Primary Assembly 46230 na Scaffold_210 unplaced-scaffold na na JBYQUM010000105.1 <> na Primary Assembly 44739 na Scaffold_256 unplaced-scaffold na na JBYQUM010000106.1 <> na Primary Assembly 44365 na Scaffold_257 unplaced-scaffold na na JBYQUM010000107.1 <> na Primary Assembly 42216 na Scaffold_214 unplaced-scaffold na na JBYQUM010000108.1 <> na Primary Assembly 42042 na Scaffold_215 unplaced-scaffold na na JBYQUM010000109.1 <> na Primary Assembly 41742 na Scaffold_250 unplaced-scaffold na na JBYQUM010000110.1 <> na Primary Assembly 41654 na Scaffold_217 unplaced-scaffold na na JBYQUM010000111.1 <> na Primary Assembly 40727 na Scaffold_219 unplaced-scaffold na na JBYQUM010000112.1 <> na Primary Assembly 38953 na Scaffold_263 unplaced-scaffold na na JBYQUM010000113.1 <> na Primary Assembly 38782 na Scaffold_221 unplaced-scaffold na na JBYQUM010000114.1 <> na Primary Assembly 37451 na Scaffold_222 unplaced-scaffold na na JBYQUM010000115.1 <> na Primary Assembly 36708 na Scaffold_223 unplaced-scaffold na na JBYQUM010000116.1 <> na Primary Assembly 36018 na Scaffold_267 unplaced-scaffold na na JBYQUM010000117.1 <> na Primary Assembly 34731 na Scaffold_226 unplaced-scaffold na na JBYQUM010000118.1 <> na Primary Assembly 33992 na Scaffold_227 unplaced-scaffold na na JBYQUM010000119.1 <> na Primary Assembly 33749 na Scaffold_270 unplaced-scaffold na na JBYQUM010000120.1 <> na Primary Assembly 32425 na Scaffold_229 unplaced-scaffold na na JBYQUM010000121.1 <> na Primary Assembly 31295 na Scaffold_316 unplaced-scaffold na na JBYQUM010000122.1 <> na Primary Assembly 30811 na Scaffold_230 unplaced-scaffold na na JBYQUM010000123.1 <> na Primary Assembly 30804 na Scaffold_318 unplaced-scaffold na na JBYQUM010000124.1 <> na Primary Assembly 30529 na Scaffold_231 unplaced-scaffold na na JBYQUM010000125.1 <> na Primary Assembly 29893 na Scaffold_232 unplaced-scaffold na na JBYQUM010000126.1 <> na Primary Assembly 29423 na Scaffold_321 unplaced-scaffold na na JBYQUM010000127.1 <> na Primary Assembly 29344 na Scaffold_322 unplaced-scaffold na na JBYQUM010000128.1 <> na Primary Assembly 29274 na Scaffold_233 unplaced-scaffold na na JBYQUM010000129.1 <> na Primary Assembly 29051 na Scaffold_324 unplaced-scaffold na na JBYQUM010000130.1 <> na Primary Assembly 27815 na Scaffold_234 unplaced-scaffold na na JBYQUM010000131.1 <> na Primary Assembly 27780 na Scaffold_236 unplaced-scaffold na na JBYQUM010000132.1 <> na Primary Assembly 27074 na Scaffold_327 unplaced-scaffold na na JBYQUM010000133.1 <> na Primary Assembly 26567 na Scaffold_328 unplaced-scaffold na na JBYQUM010000134.1 <> na Primary Assembly 26489 na Scaffold_237 unplaced-scaffold na na JBYQUM010000135.1 <> na Primary Assembly 26350 na Scaffold_330 unplaced-scaffold na na JBYQUM010000136.1 <> na Primary Assembly 26123 na Scaffold_238 unplaced-scaffold na na JBYQUM010000137.1 <> na Primary Assembly 26015 na Scaffold_332 unplaced-scaffold na na JBYQUM010000138.1 <> na Primary Assembly 25514 na Scaffold_333 unplaced-scaffold na na JBYQUM010000139.1 <> na Primary Assembly 25259 na Scaffold_239 unplaced-scaffold na na JBYQUM010000140.1 <> na Primary Assembly 25236 na Scaffold_335 unplaced-scaffold na na JBYQUM010000141.1 <> na Primary Assembly 25190 na Scaffold_304 unplaced-scaffold na na JBYQUM010000142.1 <> na Primary Assembly 23962 na Scaffold_240 unplaced-scaffold na na JBYQUM010000143.1 <> na Primary Assembly 23922 na Scaffold_295 unplaced-scaffold na na JBYQUM010000144.1 <> na Primary Assembly 23699 na Scaffold_296 unplaced-scaffold na na JBYQUM010000145.1 <> na Primary Assembly 23610 na Scaffold_241 unplaced-scaffold na na JBYQUM010000146.1 <> na Primary Assembly 23581 na Scaffold_298 unplaced-scaffold na na JBYQUM010000147.1 <> na Primary Assembly 22939 na Scaffold_242 unplaced-scaffold na na JBYQUM010000148.1 <> na Primary Assembly 22547 na Scaffold_243 unplaced-scaffold na na JBYQUM010000149.1 <> na Primary Assembly 22425 na Scaffold_301 unplaced-scaffold na na JBYQUM010000150.1 <> na Primary Assembly 21852 na Scaffold_244 unplaced-scaffold na na JBYQUM010000151.1 <> na Primary Assembly 21497 na Scaffold_303 unplaced-scaffold na na JBYQUM010000152.1 <> na Primary Assembly 21246 na Scaffold_245 unplaced-scaffold na na JBYQUM010000153.1 <> na Primary Assembly 20312 na Scaffold_305 unplaced-scaffold na na JBYQUM010000154.1 <> na Primary Assembly 20211 na Scaffold_306 unplaced-scaffold na na JBYQUM010000155.1 <> na Primary Assembly 19608 na Scaffold_307 unplaced-scaffold na na JBYQUM010000156.1 <> na Primary Assembly 18347 na Scaffold_247 unplaced-scaffold na na JBYQUM010000157.1 <> na Primary Assembly 18255 na Scaffold_309 unplaced-scaffold na na JBYQUM010000158.1 <> na Primary Assembly 17445 na Scaffold_248 unplaced-scaffold na na JBYQUM010000159.1 <> na Primary Assembly 16162 na Scaffold_311 unplaced-scaffold na na JBYQUM010000160.1 <> na Primary Assembly 16078 na Scaffold_312 unplaced-scaffold na na JBYQUM010000161.1 <> na Primary Assembly 13588 na Scaffold_313 unplaced-scaffold na na JBYQUM010000162.1 <> na Primary Assembly 12649 na Scaffold_249 unplaced-scaffold na na JBYQUM010000163.1 <> na Primary Assembly 7698 na ptg000001c_rc_rotated assembled-molecule MT Mitochondrion CM174306.1 <> na non-nuclear 19180 na