# Assembly name: bButSun1.hap2 # Organism name: Butorides sundevalli (birds) # Isolate: bButSun1 # Sex: male # Taxid: 2767357 # BioSample: SAMN59337214 # BioProject: PRJNA1463293 # Submitter: Vertebrate Genomes Project # Date: 2026-06-01 # Assembly type: haploid (haplotype 2) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JBYQUN01 # Assembly method: Hifiasm + Hi-C phasing v. 0.25.0 + galaxy3; yahs v. 1.2a.2 + galaxy3 # Expected final version: No # Genome coverage: 67.77x # Sequencing technology: PacBio Revio HiFi; Arima Hi-C v2 # RefSeq category: Reference Genome # GenBank assembly accession: GCA_057816225.1 # Linked assembly: GCA_057816235.1 (haplotype 1) # ## Assembly-Unit names: ## Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name SUPER_1 assembled-molecule 1 Chromosome CM174244.1 <> na Primary Assembly 219619494 na SUPER_2 assembled-molecule 2 Chromosome CM174245.1 <> na Primary Assembly 168888956 na SUPER_3 assembled-molecule 3 Chromosome CM174246.1 <> na Primary Assembly 129977504 na SUPER_4 assembled-molecule 4 Chromosome CM174247.1 <> na Primary Assembly 84229759 na SUPER_5 assembled-molecule 5 Chromosome CM174248.1 <> na Primary Assembly 83920930 na SUPER_6 assembled-molecule 6 Chromosome CM174249.1 <> na Primary Assembly 73632680 na SUPER_7 assembled-molecule 7 Chromosome CM174250.1 <> na Primary Assembly 51378559 na SUPER_8 assembled-molecule 8 Chromosome CM174251.1 <> na Primary Assembly 50324488 na SUPER_9 assembled-molecule 9 Chromosome CM174252.1 <> na Primary Assembly 41423837 na SUPER_10 assembled-molecule 10 Chromosome CM174253.1 <> na Primary Assembly 39220063 na SUPER_11 assembled-molecule 11 Chromosome CM174254.1 <> na Primary Assembly 27255439 na SUPER_12 assembled-molecule 12 Chromosome CM174255.1 <> na Primary Assembly 24128289 na SUPER_13 assembled-molecule 13 Chromosome CM174256.1 <> na Primary Assembly 23298090 na SUPER_14 assembled-molecule 14 Chromosome CM174257.1 <> na Primary Assembly 23242848 na SUPER_15 assembled-molecule 15 Chromosome CM174258.1 <> na Primary Assembly 20758099 na SUPER_16 assembled-molecule 16 Chromosome CM174259.1 <> na Primary Assembly 19458937 na SUPER_17 assembled-molecule 17 Chromosome CM174260.1 <> na Primary Assembly 6231544 na SUPER_18 assembled-molecule 18 Chromosome CM174261.1 <> na Primary Assembly 9463787 na SUPER_19 assembled-molecule 19 Chromosome CM174262.1 <> na Primary Assembly 9031262 na SUPER_20 assembled-molecule 20 Chromosome CM174263.1 <> na Primary Assembly 7561632 na SUPER_21 assembled-molecule 21 Chromosome CM174264.1 <> na Primary Assembly 6199425 na SUPER_22 assembled-molecule 22 Chromosome CM174265.1 <> na Primary Assembly 4821540 na SUPER_23 assembled-molecule 23 Chromosome CM174266.1 <> na Primary Assembly 5300915 na SUPER_24 assembled-molecule 24 Chromosome CM174267.1 <> na Primary Assembly 3444125 na SUPER_25 assembled-molecule 25 Chromosome CM174268.1 <> na Primary Assembly 2219548 na SUPER_26 assembled-molecule 26 Chromosome CM174269.1 <> na Primary Assembly 2466317 na SUPER_27 assembled-molecule 27 Chromosome CM174270.1 <> na Primary Assembly 1148042 na SUPER_28 assembled-molecule 28 Chromosome CM174271.1 <> na Primary Assembly 1414769 na SUPER_29 assembled-molecule 29 Chromosome CM174272.1 <> na Primary Assembly 1301113 na SUPER_30 assembled-molecule 30 Chromosome CM174273.1 <> na Primary Assembly 918433 na SUPER_Z assembled-molecule Z Chromosome CM174274.1 <> na Primary Assembly 86441161 na SUPER_22_unloc_1 unlocalized-scaffold 22 Chromosome JBYQUN010000036.1 <> na Primary Assembly 735328 na Scaffold_71 unplaced-scaffold na na JBYQUN010000026.1 <> na Primary Assembly 2623861 na Scaffold_74 unplaced-scaffold na na JBYQUN010000030.1 <> na Primary Assembly 1356352 na Scaffold_75 unplaced-scaffold na na JBYQUN010000033.1 <> na Primary Assembly 1050492 na Scaffold_78 unplaced-scaffold na na JBYQUN010000035.1 <> na Primary Assembly 775844 na Scaffold_80 unplaced-scaffold na na JBYQUN010000037.1 <> na Primary Assembly 656894 na Scaffold_81 unplaced-scaffold na na JBYQUN010000038.1 <> na Primary Assembly 604062 na Scaffold_82 unplaced-scaffold na na JBYQUN010000039.1 <> na Primary Assembly 600684 na Scaffold_85 unplaced-scaffold na na JBYQUN010000040.1 <> na Primary Assembly 547105 na Scaffold_86 unplaced-scaffold na na JBYQUN010000041.1 <> na Primary Assembly 545233 na Scaffold_87 unplaced-scaffold na na JBYQUN010000042.1 <> na Primary Assembly 538831 na Scaffold_88 unplaced-scaffold na na JBYQUN010000043.1 <> na Primary Assembly 518187 na Scaffold_89 unplaced-scaffold na na JBYQUN010000044.1 <> na Primary Assembly 517295 na Scaffold_95 unplaced-scaffold na na JBYQUN010000045.1 <> na Primary Assembly 400172 na Scaffold_96 unplaced-scaffold na na JBYQUN010000046.1 <> na Primary Assembly 386692 na Scaffold_97 unplaced-scaffold na na JBYQUN010000047.1 <> na Primary Assembly 384672 na Scaffold_98 unplaced-scaffold na na JBYQUN010000048.1 <> na Primary Assembly 364002 na Scaffold_100 unplaced-scaffold na na JBYQUN010000049.1 <> na Primary Assembly 338244 na Scaffold_103 unplaced-scaffold na na JBYQUN010000050.1 <> na Primary Assembly 307637 na Scaffold_104 unplaced-scaffold na na JBYQUN010000051.1 <> na Primary Assembly 299046 na Scaffold_105 unplaced-scaffold na na JBYQUN010000052.1 <> na Primary Assembly 295101 na Scaffold_67 unplaced-scaffold na na JBYQUN010000053.1 <> na Primary Assembly 283930 na Scaffold_111 unplaced-scaffold na na JBYQUN010000054.1 <> na Primary Assembly 238046 na Scaffold_112 unplaced-scaffold na na JBYQUN010000055.1 <> na Primary Assembly 227120 na Scaffold_115 unplaced-scaffold na na JBYQUN010000056.1 <> na Primary Assembly 205443 na Scaffold_117 unplaced-scaffold na na JBYQUN010000057.1 <> na Primary Assembly 202251 na Scaffold_119 unplaced-scaffold na na JBYQUN010000058.1 <> na Primary Assembly 194204 na Scaffold_107 unplaced-scaffold na na JBYQUN010000059.1 <> na Primary Assembly 187188 na Scaffold_120 unplaced-scaffold na na JBYQUN010000060.1 <> na Primary Assembly 183622 na Scaffold_122 unplaced-scaffold na na JBYQUN010000061.1 <> na Primary Assembly 170404 na Scaffold_123 unplaced-scaffold na na JBYQUN010000062.1 <> na Primary Assembly 169455 na Scaffold_106 unplaced-scaffold na na JBYQUN010000063.1 <> na Primary Assembly 162486 na Scaffold_125 unplaced-scaffold na na JBYQUN010000064.1 <> na Primary Assembly 160905 na Scaffold_126 unplaced-scaffold na na JBYQUN010000065.1 <> na Primary Assembly 156286 na Scaffold_127 unplaced-scaffold na na JBYQUN010000066.1 <> na Primary Assembly 152132 na Scaffold_129 unplaced-scaffold na na JBYQUN010000067.1 <> na Primary Assembly 149457 na Scaffold_130 unplaced-scaffold na na JBYQUN010000068.1 <> na Primary Assembly 148470 na Scaffold_134 unplaced-scaffold na na JBYQUN010000069.1 <> na Primary Assembly 141293 na Scaffold_136 unplaced-scaffold na na JBYQUN010000070.1 <> na Primary Assembly 136054 na Scaffold_137 unplaced-scaffold na na JBYQUN010000071.1 <> na Primary Assembly 129530 na Scaffold_70 unplaced-scaffold na na JBYQUN010000072.1 <> na Primary Assembly 118423 na Scaffold_142 unplaced-scaffold na na JBYQUN010000073.1 <> na Primary Assembly 117296 na Scaffold_143 unplaced-scaffold na na JBYQUN010000074.1 <> na Primary Assembly 114730 na Scaffold_65 unplaced-scaffold na na JBYQUN010000075.1 <> na Primary Assembly 110914 na Scaffold_149 unplaced-scaffold na na JBYQUN010000076.1 <> na Primary Assembly 107603 na Scaffold_151 unplaced-scaffold na na JBYQUN010000077.1 <> na Primary Assembly 106002 na Scaffold_152 unplaced-scaffold na na JBYQUN010000078.1 <> na Primary Assembly 105037 na Scaffold_153 unplaced-scaffold na na JBYQUN010000079.1 <> na Primary Assembly 104913 na Scaffold_154 unplaced-scaffold na na JBYQUN010000080.1 <> na Primary Assembly 103592 na Scaffold_69 unplaced-scaffold na na JBYQUN010000081.1 <> na Primary Assembly 103553 na Scaffold_157 unplaced-scaffold na na JBYQUN010000082.1 <> na Primary Assembly 97464 na Scaffold_159 unplaced-scaffold na na JBYQUN010000083.1 <> na Primary Assembly 95837 na Scaffold_160 unplaced-scaffold na na JBYQUN010000084.1 <> na Primary Assembly 95366 na Scaffold_161 unplaced-scaffold na na JBYQUN010000085.1 <> na Primary Assembly 93877 na Scaffold_162 unplaced-scaffold na na JBYQUN010000086.1 <> na Primary Assembly 93348 na Scaffold_163 unplaced-scaffold na na JBYQUN010000087.1 <> na Primary Assembly 92825 na Scaffold_165 unplaced-scaffold na na JBYQUN010000088.1 <> na Primary Assembly 87790 na Scaffold_166 unplaced-scaffold na na JBYQUN010000089.1 <> na Primary Assembly 87360 na Scaffold_167 unplaced-scaffold na na JBYQUN010000090.1 <> na Primary Assembly 86993 na Scaffold_169 unplaced-scaffold na na JBYQUN010000091.1 <> na Primary Assembly 86192 na Scaffold_170 unplaced-scaffold na na JBYQUN010000092.1 <> na Primary Assembly 85239 na Scaffold_171 unplaced-scaffold na na JBYQUN010000093.1 <> na Primary Assembly 84551 na Scaffold_172 unplaced-scaffold na na JBYQUN010000094.1 <> na Primary Assembly 84322 na Scaffold_173 unplaced-scaffold na na JBYQUN010000095.1 <> na Primary Assembly 81947 na Scaffold_174 unplaced-scaffold na na JBYQUN010000096.1 <> na Primary Assembly 80250 na Scaffold_179 unplaced-scaffold na na JBYQUN010000097.1 <> na Primary Assembly 72774 na Scaffold_181 unplaced-scaffold na na JBYQUN010000098.1 <> na Primary Assembly 72098 na Scaffold_182 unplaced-scaffold na na JBYQUN010000099.1 <> na Primary Assembly 71086 na Scaffold_184 unplaced-scaffold na na JBYQUN010000100.1 <> na Primary Assembly 70092 na Scaffold_187 unplaced-scaffold na na JBYQUN010000101.1 <> na Primary Assembly 67816 na Scaffold_424 unplaced-scaffold na na JBYQUN010000102.1 <> na Primary Assembly 66819 na Scaffold_188 unplaced-scaffold na na JBYQUN010000103.1 <> na Primary Assembly 66150 na Scaffold_190 unplaced-scaffold na na JBYQUN010000104.1 <> na Primary Assembly 64610 na Scaffold_192 unplaced-scaffold na na JBYQUN010000105.1 <> na Primary Assembly 62718 na Scaffold_194 unplaced-scaffold na na JBYQUN010000106.1 <> na Primary Assembly 61810 na Scaffold_429 unplaced-scaffold na na JBYQUN010000107.1 <> na Primary Assembly 59217 na Scaffold_200 unplaced-scaffold na na JBYQUN010000108.1 <> na Primary Assembly 56235 na Scaffold_202 unplaced-scaffold na na JBYQUN010000109.1 <> na Primary Assembly 55007 na Scaffold_432 unplaced-scaffold na na JBYQUN010000110.1 <> na Primary Assembly 53972 na Scaffold_204 unplaced-scaffold na na JBYQUN010000111.1 <> na Primary Assembly 51753 na Scaffold_206 unplaced-scaffold na na JBYQUN010000112.1 <> na Primary Assembly 48545 na Scaffold_435 unplaced-scaffold na na JBYQUN010000113.1 <> na Primary Assembly 48359 na Scaffold_207 unplaced-scaffold na na JBYQUN010000114.1 <> na Primary Assembly 48007 na Scaffold_208 unplaced-scaffold na na JBYQUN010000115.1 <> na Primary Assembly 47002 na Scaffold_438 unplaced-scaffold na na JBYQUN010000116.1 <> na Primary Assembly 46696 na Scaffold_209 unplaced-scaffold na na JBYQUN010000117.1 <> na Primary Assembly 46647 na Scaffold_211 unplaced-scaffold na na JBYQUN010000118.1 <> na Primary Assembly 44587 na Scaffold_212 unplaced-scaffold na na JBYQUN010000119.1 <> na Primary Assembly 44165 na Scaffold_442 unplaced-scaffold na na JBYQUN010000120.1 <> na Primary Assembly 44136 na Scaffold_213 unplaced-scaffold na na JBYQUN010000121.1 <> na Primary Assembly 43771 na Scaffold_216 unplaced-scaffold na na JBYQUN010000122.1 <> na Primary Assembly 41168 na Scaffold_487 unplaced-scaffold na na JBYQUN010000123.1 <> na Primary Assembly 41090 na Scaffold_488 unplaced-scaffold na na JBYQUN010000124.1 <> na Primary Assembly 40720 na Scaffold_218 unplaced-scaffold na na JBYQUN010000125.1 <> na Primary Assembly 39663 na Scaffold_490 unplaced-scaffold na na JBYQUN010000126.1 <> na Primary Assembly 39049 na Scaffold_220 unplaced-scaffold na na JBYQUN010000127.1 <> na Primary Assembly 38163 na Scaffold_492 unplaced-scaffold na na JBYQUN010000128.1 <> na Primary Assembly 38060 na Scaffold_493 unplaced-scaffold na na JBYQUN010000129.1 <> na Primary Assembly 37250 na Scaffold_494 unplaced-scaffold na na JBYQUN010000130.1 <> na Primary Assembly 36185 na Scaffold_495 unplaced-scaffold na na JBYQUN010000131.1 <> na Primary Assembly 35566 na Scaffold_224 unplaced-scaffold na na JBYQUN010000132.1 <> na Primary Assembly 35064 na Scaffold_497 unplaced-scaffold na na JBYQUN010000133.1 <> na Primary Assembly 34681 na Scaffold_225 unplaced-scaffold na na JBYQUN010000134.1 <> na Primary Assembly 34206 na Scaffold_499 unplaced-scaffold na na JBYQUN010000135.1 <> na Primary Assembly 34149 na Scaffold_500 unplaced-scaffold na na JBYQUN010000136.1 <> na Primary Assembly 33938 na Scaffold_501 unplaced-scaffold na na JBYQUN010000137.1 <> na Primary Assembly 33360 na Scaffold_228 unplaced-scaffold na na JBYQUN010000138.1 <> na Primary Assembly 33341 na Scaffold_503 unplaced-scaffold na na JBYQUN010000139.1 <> na Primary Assembly 32073 na Scaffold_504 unplaced-scaffold na na JBYQUN010000140.1 <> na Primary Assembly 30524 na Scaffold_505 unplaced-scaffold na na JBYQUN010000141.1 <> na Primary Assembly 29579 na Scaffold_475 unplaced-scaffold na na JBYQUN010000142.1 <> na Primary Assembly 27876 na Scaffold_465 unplaced-scaffold na na JBYQUN010000143.1 <> na Primary Assembly 27444 na Scaffold_235 unplaced-scaffold na na JBYQUN010000144.1 <> na Primary Assembly 27250 na Scaffold_467 unplaced-scaffold na na JBYQUN010000145.1 <> na Primary Assembly 27231 na Scaffold_468 unplaced-scaffold na na JBYQUN010000146.1 <> na Primary Assembly 27212 na Scaffold_469 unplaced-scaffold na na JBYQUN010000147.1 <> na Primary Assembly 26241 na Scaffold_470 unplaced-scaffold na na JBYQUN010000148.1 <> na Primary Assembly 22693 na Scaffold_471 unplaced-scaffold na na JBYQUN010000149.1 <> na Primary Assembly 22600 na Scaffold_472 unplaced-scaffold na na JBYQUN010000150.1 <> na Primary Assembly 22509 na Scaffold_473 unplaced-scaffold na na JBYQUN010000151.1 <> na Primary Assembly 22487 na Scaffold_474 unplaced-scaffold na na JBYQUN010000152.1 <> na Primary Assembly 21877 na Scaffold_464 unplaced-scaffold na na JBYQUN010000153.1 <> na Primary Assembly 21617 na Scaffold_476 unplaced-scaffold na na JBYQUN010000154.1 <> na Primary Assembly 21294 na Scaffold_477 unplaced-scaffold na na JBYQUN010000155.1 <> na Primary Assembly 20291 na Scaffold_246 unplaced-scaffold na na JBYQUN010000156.1 <> na Primary Assembly 19211 na Scaffold_479 unplaced-scaffold na na JBYQUN010000157.1 <> na Primary Assembly 18716 na Scaffold_480 unplaced-scaffold na na JBYQUN010000158.1 <> na Primary Assembly 18544 na Scaffold_481 unplaced-scaffold na na JBYQUN010000159.1 <> na Primary Assembly 16781 na Scaffold_482 unplaced-scaffold na na JBYQUN010000160.1 <> na Primary Assembly 16692 na Scaffold_483 unplaced-scaffold na na JBYQUN010000161.1 <> na Primary Assembly 16681 na Scaffold_484 unplaced-scaffold na na JBYQUN010000162.1 <> na Primary Assembly 15628 na