# Assembly name: bMyiOra2.hap2 # Organism name: Myioborus ornatus (birds) # Isolate: bMyiOra2 # Sex: female # Taxid: 328440 # BioSample: SAMN57316997 # BioProject: PRJNA1454679 # Submitter: Vertebrate Genomes Project # Date: 2026-06-01 # Assembly type: haploid (haplotype 2) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JBXYJK01 # Assembly method: Hifiasm + Hi-C phasing v. 0.25.0 + galaxy0; yahs v. 1.2a.2 + galaxy2 # Expected final version: No # Genome coverage: 79.0x # Sequencing technology: PacBio Revio HiFi; Arima Hi-C v2 # RefSeq category: Reference Genome # GenBank assembly accession: GCA_057814795.1 # Linked assembly: GCA_057814835.1 (haplotype 1) # ## Assembly-Unit names: ## Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name SUPER_1 assembled-molecule 1 Chromosome CM174128.1 <> na Primary Assembly 158865394 na SUPER_2 assembled-molecule 2 Chromosome CM174129.1 <> na Primary Assembly 128209001 na SUPER_3 assembled-molecule 3 Chromosome CM174130.1 <> na Primary Assembly 117981721 na SUPER_4 assembled-molecule 4 Chromosome CM174131.1 <> na Primary Assembly 79528019 na SUPER_5 assembled-molecule 5 Chromosome CM174132.1 <> na Primary Assembly 78921101 na SUPER_6 assembled-molecule 6 Chromosome CM174133.1 <> na Primary Assembly 74872145 na SUPER_7 assembled-molecule 7 Chromosome CM174134.1 <> na Primary Assembly 39834624 na SUPER_8 assembled-molecule 8 Chromosome CM174135.1 <> na Primary Assembly 44717346 na SUPER_9 assembled-molecule 9 Chromosome CM174136.1 <> na Primary Assembly 39742902 na SUPER_10 assembled-molecule 10 Chromosome CM174137.1 <> na Primary Assembly 31583101 na SUPER_11 assembled-molecule 11 Chromosome CM174138.1 <> na Primary Assembly 27575369 na SUPER_12 assembled-molecule 12 Chromosome CM174139.1 <> na Primary Assembly 26563273 na SUPER_13 assembled-molecule 13 Chromosome CM174140.1 <> na Primary Assembly 27326682 na SUPER_14 assembled-molecule 14 Chromosome CM174141.1 <> na Primary Assembly 25714143 na SUPER_15 assembled-molecule 15 Chromosome CM174142.1 <> na Primary Assembly 24176861 na SUPER_16 assembled-molecule 16 Chromosome CM174143.1 <> na Primary Assembly 20654602 na SUPER_17 assembled-molecule 17 Chromosome CM174144.1 <> na Primary Assembly 18379828 na SUPER_18 assembled-molecule 18 Chromosome CM174145.1 <> na Primary Assembly 18046623 na SUPER_19 assembled-molecule 19 Chromosome CM174146.1 <> na Primary Assembly 14574153 na SUPER_20 assembled-molecule 20 Chromosome CM174147.1 <> na Primary Assembly 15706831 na SUPER_21 assembled-molecule 21 Chromosome CM174148.1 <> na Primary Assembly 14863758 na SUPER_22 assembled-molecule 22 Chromosome CM174149.1 <> na Primary Assembly 14159170 na SUPER_23 assembled-molecule 23 Chromosome CM174150.1 <> na Primary Assembly 14077024 na SUPER_24 assembled-molecule 24 Chromosome CM174151.1 <> na Primary Assembly 10144520 na SUPER_25 assembled-molecule 25 Chromosome CM174152.1 <> na Primary Assembly 10935415 na SUPER_26 assembled-molecule 26 Chromosome CM174153.1 <> na Primary Assembly 12378615 na SUPER_27 assembled-molecule 27 Chromosome CM174154.1 <> na Primary Assembly 11099656 na SUPER_28 assembled-molecule 28 Chromosome CM174155.1 <> na Primary Assembly 9926218 na SUPER_29 assembled-molecule 29 Chromosome CM174156.1 <> na Primary Assembly 9418452 na SUPER_30 assembled-molecule 30 Chromosome CM174157.1 <> na Primary Assembly 6791739 na SUPER_31 assembled-molecule 31 Chromosome CM174158.1 <> na Primary Assembly 8419759 na SUPER_32 assembled-molecule 32 Chromosome CM174159.1 <> na Primary Assembly 8370056 na SUPER_33 assembled-molecule 33 Chromosome CM174160.1 <> na Primary Assembly 8415457 na SUPER_34 assembled-molecule 34 Chromosome CM174161.1 <> na Primary Assembly 6615955 na SUPER_35 assembled-molecule 35 Chromosome CM174162.1 <> na Primary Assembly 8881258 na SUPER_36 assembled-molecule 36 Chromosome CM174163.1 <> na Primary Assembly 6529816 na SUPER_37 assembled-molecule 37 Chromosome CM174164.1 <> na Primary Assembly 6405407 na SUPER_38 assembled-molecule 38 Chromosome CM174165.1 <> na Primary Assembly 5838520 na SUPER_39 assembled-molecule 39 Chromosome CM174166.1 <> na Primary Assembly 5500469 na SUPER_4_unloc_1 unlocalized-scaffold 4 Chromosome JBXYJK010000040.1 <> na Primary Assembly 617073 na SUPER_4_unloc_2 unlocalized-scaffold 4 Chromosome JBXYJK010000041.1 <> na Primary Assembly 235044 na SUPER_4_unloc_3 unlocalized-scaffold 4 Chromosome JBXYJK010000045.1 <> na Primary Assembly 122750 na SUPER_24_unloc_1 unlocalized-scaffold 24 Chromosome JBXYJK010000043.1 <> na Primary Assembly 134610 na Scaffold_81 unplaced-scaffold na na JBXYJK010000042.1 <> na Primary Assembly 171402 na Scaffold_86 unplaced-scaffold na na JBXYJK010000044.1 <> na Primary Assembly 125520 na Scaffold_82 unplaced-scaffold na na JBXYJK010000046.1 <> na Primary Assembly 114763 na Scaffold_88 unplaced-scaffold na na JBXYJK010000047.1 <> na Primary Assembly 113828 na Scaffold_85 unplaced-scaffold na na JBXYJK010000048.1 <> na Primary Assembly 101294 na Scaffold_95 unplaced-scaffold na na JBXYJK010000049.1 <> na Primary Assembly 91617 na Scaffold_96 unplaced-scaffold na na JBXYJK010000050.1 <> na Primary Assembly 85000 na Scaffold_98 unplaced-scaffold na na JBXYJK010000051.1 <> na Primary Assembly 81748 na Scaffold_100 unplaced-scaffold na na JBXYJK010000052.1 <> na Primary Assembly 75289 na Scaffold_106 unplaced-scaffold na na JBXYJK010000053.1 <> na Primary Assembly 63334 na Scaffold_107 unplaced-scaffold na na JBXYJK010000054.1 <> na Primary Assembly 63281 na Scaffold_108 unplaced-scaffold na na JBXYJK010000055.1 <> na Primary Assembly 61062 na Scaffold_307 unplaced-scaffold na na JBXYJK010000056.1 <> na Primary Assembly 59676 na Scaffold_110 unplaced-scaffold na na JBXYJK010000057.1 <> na Primary Assembly 59380 na Scaffold_111 unplaced-scaffold na na JBXYJK010000058.1 <> na Primary Assembly 59271 na Scaffold_112 unplaced-scaffold na na JBXYJK010000059.1 <> na Primary Assembly 59198 na Scaffold_303 unplaced-scaffold na na JBXYJK010000060.1 <> na Primary Assembly 55839 na Scaffold_119 unplaced-scaffold na na JBXYJK010000061.1 <> na Primary Assembly 45691 na Scaffold_120 unplaced-scaffold na na JBXYJK010000062.1 <> na Primary Assembly 43438 na Scaffold_300 unplaced-scaffold na na JBXYJK010000063.1 <> na Primary Assembly 43373 na Scaffold_121 unplaced-scaffold na na JBXYJK010000064.1 <> na Primary Assembly 42482 na Scaffold_298 unplaced-scaffold na na JBXYJK010000065.1 <> na Primary Assembly 41397 na Scaffold_124 unplaced-scaffold na na JBXYJK010000066.1 <> na Primary Assembly 38763 na Scaffold_126 unplaced-scaffold na na JBXYJK010000067.1 <> na Primary Assembly 36764 na Scaffold_295 unplaced-scaffold na na JBXYJK010000068.1 <> na Primary Assembly 34371 na Scaffold_128 unplaced-scaffold na na JBXYJK010000069.1 <> na Primary Assembly 31542 na Scaffold_293 unplaced-scaffold na na JBXYJK010000070.1 <> na Primary Assembly 26906 na Scaffold_292 unplaced-scaffold na na JBXYJK010000071.1 <> na Primary Assembly 24626 na