# Assembly name: mRhiBla1.hap2 # Organism name: Rhinolophus blasii (Blasius's horseshoe bat) # Isolate: mRhiBla1 # Sex: male # Taxid: 519037 # BioSample: SAMN55323438 # BioProject: PRJNA1422840 # Submitter: Bat1K Project # Date: 2026-05-11 # Assembly type: haploid (haplotype 2) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JBXXPX01 # Assembly method: Hifiasm + Hi-C phasing v. 0.19.3 + galaxy0; yahs v. 1.2a.2 + galaxy1 # Expected final version: No # Genome coverage: 34.78x # Sequencing technology: PacBio Sequel II HiFi; Arima Hi-C # RefSeq category: Reference Genome # GenBank assembly accession: GCA_057428315.1 # Linked assembly: GCA_057428245.1 (haplotype 1) # ## Assembly-Unit names: ## Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name SUPER_1 assembled-molecule 1 Chromosome CM171855.1 <> na Primary Assembly 111000548 na SUPER_2 assembled-molecule 2 Chromosome CM171856.1 <> na Primary Assembly 109781586 na SUPER_3 assembled-molecule 3 Chromosome CM171857.1 <> na Primary Assembly 108022345 na SUPER_4 assembled-molecule 4 Chromosome CM171858.1 <> na Primary Assembly 107025200 na SUPER_5 assembled-molecule 5 Chromosome CM171859.1 <> na Primary Assembly 101942282 na SUPER_6 assembled-molecule 6 Chromosome CM171860.1 <> na Primary Assembly 100801060 na SUPER_7 assembled-molecule 7 Chromosome CM171861.1 <> na Primary Assembly 100491593 na SUPER_8 assembled-molecule 8 Chromosome CM171862.1 <> na Primary Assembly 93804019 na SUPER_9 assembled-molecule 9 Chromosome CM171863.1 <> na Primary Assembly 92946771 na SUPER_10 assembled-molecule 10 Chromosome CM171864.1 <> na Primary Assembly 89497247 na SUPER_11 assembled-molecule 11 Chromosome CM171865.1 <> na Primary Assembly 83988472 na SUPER_12 assembled-molecule 12 Chromosome CM171866.1 <> na Primary Assembly 78090226 na SUPER_13 assembled-molecule 13 Chromosome CM171867.1 <> na Primary Assembly 73500050 na SUPER_14 assembled-molecule 14 Chromosome CM171868.1 <> na Primary Assembly 67933835 na SUPER_15 assembled-molecule 15 Chromosome CM171869.1 <> na Primary Assembly 67457150 na SUPER_16 assembled-molecule 16 Chromosome CM171870.1 <> na Primary Assembly 62800001 na SUPER_17 assembled-molecule 17 Chromosome CM171871.1 <> na Primary Assembly 60224888 na SUPER_18 assembled-molecule 18 Chromosome CM171872.1 <> na Primary Assembly 58966225 na SUPER_19 assembled-molecule 19 Chromosome CM171873.1 <> na Primary Assembly 54350797 na SUPER_20 assembled-molecule 20 Chromosome CM171874.1 <> na Primary Assembly 53549797 na SUPER_21 assembled-molecule 21 Chromosome CM171875.1 <> na Primary Assembly 51726965 na SUPER_22 assembled-molecule 22 Chromosome CM171876.1 <> na Primary Assembly 46083224 na SUPER_23 assembled-molecule 23 Chromosome CM171877.1 <> na Primary Assembly 44764048 na SUPER_24 assembled-molecule 24 Chromosome CM171878.1 <> na Primary Assembly 40981751 na SUPER_25 assembled-molecule 25 Chromosome CM171879.1 <> na Primary Assembly 30458492 na SUPER_26 assembled-molecule 26 Chromosome CM171880.1 <> na Primary Assembly 27882992 na SUPER_27 assembled-molecule 27 Chromosome CM171881.1 <> na Primary Assembly 19491321 na SUPER_28 assembled-molecule 28 Chromosome CM171882.1 <> na Primary Assembly 17204778 na Scaffold_60 unplaced-scaffold na na JBXXPX010000029.1 <> na Primary Assembly 617733 na Scaffold_59 unplaced-scaffold na na JBXXPX010000030.1 <> na Primary Assembly 487200 na Scaffold_65 unplaced-scaffold na na JBXXPX010000031.1 <> na Primary Assembly 376877 na Scaffold_67 unplaced-scaffold na na JBXXPX010000032.1 <> na Primary Assembly 361507 na Scaffold_68 unplaced-scaffold na na JBXXPX010000033.1 <> na Primary Assembly 359070 na Scaffold_73 unplaced-scaffold na na JBXXPX010000034.1 <> na Primary Assembly 312983 na Scaffold_75 unplaced-scaffold na na JBXXPX010000035.1 <> na Primary Assembly 303453 na Scaffold_76 unplaced-scaffold na na JBXXPX010000036.1 <> na Primary Assembly 297164 na Scaffold_77 unplaced-scaffold na na JBXXPX010000037.1 <> na Primary Assembly 294386 na Scaffold_83 unplaced-scaffold na na JBXXPX010000038.1 <> na Primary Assembly 252673 na Scaffold_84 unplaced-scaffold na na JBXXPX010000039.1 <> na Primary Assembly 240511 na Scaffold_86 unplaced-scaffold na na JBXXPX010000040.1 <> na Primary Assembly 220031 na Scaffold_89 unplaced-scaffold na na JBXXPX010000041.1 <> na Primary Assembly 210770 na Scaffold_93 unplaced-scaffold na na JBXXPX010000042.1 <> na Primary Assembly 202353 na Scaffold_94 unplaced-scaffold na na JBXXPX010000043.1 <> na Primary Assembly 199840 na Scaffold_96 unplaced-scaffold na na JBXXPX010000044.1 <> na Primary Assembly 198493 na Scaffold_99 unplaced-scaffold na na JBXXPX010000045.1 <> na Primary Assembly 181182 na Scaffold_102 unplaced-scaffold na na JBXXPX010000046.1 <> na Primary Assembly 168596 na Scaffold_104 unplaced-scaffold na na JBXXPX010000047.1 <> na Primary Assembly 159551 na Scaffold_108 unplaced-scaffold na na JBXXPX010000048.1 <> na Primary Assembly 152636 na Scaffold_109 unplaced-scaffold na na JBXXPX010000049.1 <> na Primary Assembly 150854 na Scaffold_116 unplaced-scaffold na na JBXXPX010000050.1 <> na Primary Assembly 132143 na Scaffold_117 unplaced-scaffold na na JBXXPX010000051.1 <> na Primary Assembly 131984 na Scaffold_120 unplaced-scaffold na na JBXXPX010000052.1 <> na Primary Assembly 129871 na Scaffold_122 unplaced-scaffold na na JBXXPX010000053.1 <> na Primary Assembly 126393 na Scaffold_123 unplaced-scaffold na na JBXXPX010000054.1 <> na Primary Assembly 122262 na Scaffold_127 unplaced-scaffold na na JBXXPX010000055.1 <> na Primary Assembly 119370 na Scaffold_463 unplaced-scaffold na na JBXXPX010000056.1 <> na Primary Assembly 119333 na Scaffold_130 unplaced-scaffold na na JBXXPX010000057.1 <> na Primary Assembly 114239 na Scaffold_131 unplaced-scaffold na na JBXXPX010000058.1 <> na Primary Assembly 113339 na Scaffold_466 unplaced-scaffold na na JBXXPX010000059.1 <> na Primary Assembly 107263 na Scaffold_137 unplaced-scaffold na na JBXXPX010000060.1 <> na Primary Assembly 106877 na Scaffold_138 unplaced-scaffold na na JBXXPX010000061.1 <> na Primary Assembly 106324 na Scaffold_140 unplaced-scaffold na na JBXXPX010000062.1 <> na Primary Assembly 105199 na Scaffold_141 unplaced-scaffold na na JBXXPX010000063.1 <> na Primary Assembly 104562 na Scaffold_142 unplaced-scaffold na na JBXXPX010000064.1 <> na Primary Assembly 104554 na Scaffold_143 unplaced-scaffold na na JBXXPX010000065.1 <> na Primary Assembly 103644 na Scaffold_473 unplaced-scaffold na na JBXXPX010000066.1 <> na Primary Assembly 99264 na Scaffold_150 unplaced-scaffold na na JBXXPX010000067.1 <> na Primary Assembly 94928 na Scaffold_155 unplaced-scaffold na na JBXXPX010000068.1 <> na Primary Assembly 88793 na Scaffold_476 unplaced-scaffold na na JBXXPX010000069.1 <> na Primary Assembly 88213 na Scaffold_157 unplaced-scaffold na na JBXXPX010000070.1 <> na Primary Assembly 86840 na Scaffold_158 unplaced-scaffold na na JBXXPX010000071.1 <> na Primary Assembly 85516 na Scaffold_479 unplaced-scaffold na na JBXXPX010000072.1 <> na Primary Assembly 84157 na Scaffold_163 unplaced-scaffold na na JBXXPX010000073.1 <> na Primary Assembly 78882 na Scaffold_481 unplaced-scaffold na na JBXXPX010000074.1 <> na Primary Assembly 78642 na Scaffold_482 unplaced-scaffold na na JBXXPX010000075.1 <> na Primary Assembly 77699 na Scaffold_168 unplaced-scaffold na na JBXXPX010000076.1 <> na Primary Assembly 69259 na Scaffold_484 unplaced-scaffold na na JBXXPX010000077.1 <> na Primary Assembly 69248 na Scaffold_170 unplaced-scaffold na na JBXXPX010000078.1 <> na Primary Assembly 66859 na Scaffold_171 unplaced-scaffold na na JBXXPX010000079.1 <> na Primary Assembly 65558 na Scaffold_487 unplaced-scaffold na na JBXXPX010000080.1 <> na Primary Assembly 63478 na Scaffold_488 unplaced-scaffold na na JBXXPX010000081.1 <> na Primary Assembly 62261 na Scaffold_174 unplaced-scaffold na na JBXXPX010000082.1 <> na Primary Assembly 61574 na Scaffold_490 unplaced-scaffold na na JBXXPX010000083.1 <> na Primary Assembly 60377 na Scaffold_175 unplaced-scaffold na na JBXXPX010000084.1 <> na Primary Assembly 60039 na Scaffold_492 unplaced-scaffold na na JBXXPX010000085.1 <> na Primary Assembly 58862 na Scaffold_177 unplaced-scaffold na na JBXXPX010000086.1 <> na Primary Assembly 58427 na Scaffold_494 unplaced-scaffold na na JBXXPX010000087.1 <> na Primary Assembly 57824 na Scaffold_178 unplaced-scaffold na na JBXXPX010000088.1 <> na Primary Assembly 57058 na Scaffold_496 unplaced-scaffold na na JBXXPX010000089.1 <> na Primary Assembly 57021 na Scaffold_497 unplaced-scaffold na na JBXXPX010000090.1 <> na Primary Assembly 54633 na Scaffold_498 unplaced-scaffold na na JBXXPX010000091.1 <> na Primary Assembly 54200 na Scaffold_183 unplaced-scaffold na na JBXXPX010000092.1 <> na Primary Assembly 53973 na Scaffold_500 unplaced-scaffold na na JBXXPX010000093.1 <> na Primary Assembly 53078 na Scaffold_184 unplaced-scaffold na na JBXXPX010000094.1 <> na Primary Assembly 52280 na Scaffold_502 unplaced-scaffold na na JBXXPX010000095.1 <> na Primary Assembly 50908 na Scaffold_503 unplaced-scaffold na na JBXXPX010000096.1 <> na Primary Assembly 49602 na Scaffold_187 unplaced-scaffold na na JBXXPX010000097.1 <> na Primary Assembly 48833 na Scaffold_505 unplaced-scaffold na na JBXXPX010000098.1 <> na Primary Assembly 48500 na Scaffold_188 unplaced-scaffold na na JBXXPX010000099.1 <> na Primary Assembly 48232 na Scaffold_507 unplaced-scaffold na na JBXXPX010000100.1 <> na Primary Assembly 47275 na Scaffold_190 unplaced-scaffold na na JBXXPX010000101.1 <> na Primary Assembly 46862 na Scaffold_509 unplaced-scaffold na na JBXXPX010000102.1 <> na Primary Assembly 46477 na Scaffold_192 unplaced-scaffold na na JBXXPX010000103.1 <> na Primary Assembly 44414 na Scaffold_511 unplaced-scaffold na na JBXXPX010000104.1 <> na Primary Assembly 43966 na Scaffold_512 unplaced-scaffold na na JBXXPX010000105.1 <> na Primary Assembly 43744 na Scaffold_513 unplaced-scaffold na na JBXXPX010000106.1 <> na Primary Assembly 43586 na Scaffold_195 unplaced-scaffold na na JBXXPX010000107.1 <> na Primary Assembly 42179 na Scaffold_515 unplaced-scaffold na na JBXXPX010000108.1 <> na Primary Assembly 41238 na Scaffold_516 unplaced-scaffold na na JBXXPX010000109.1 <> na Primary Assembly 40863 na Scaffold_517 unplaced-scaffold na na JBXXPX010000110.1 <> na Primary Assembly 40527 na Scaffold_518 unplaced-scaffold na na JBXXPX010000111.1 <> na Primary Assembly 40343 na Scaffold_519 unplaced-scaffold na na JBXXPX010000112.1 <> na Primary Assembly 39732 na Scaffold_520 unplaced-scaffold na na JBXXPX010000113.1 <> na Primary Assembly 37592 na Scaffold_521 unplaced-scaffold na na JBXXPX010000114.1 <> na Primary Assembly 37135 na Scaffold_200 unplaced-scaffold na na JBXXPX010000115.1 <> na Primary Assembly 36788 na Scaffold_201 unplaced-scaffold na na JBXXPX010000116.1 <> na Primary Assembly 36254 na Scaffold_524 unplaced-scaffold na na JBXXPX010000117.1 <> na Primary Assembly 34959 na Scaffold_525 unplaced-scaffold na na JBXXPX010000118.1 <> na Primary Assembly 33947 na Scaffold_526 unplaced-scaffold na na JBXXPX010000119.1 <> na Primary Assembly 33212 na Scaffold_204 unplaced-scaffold na na JBXXPX010000120.1 <> na Primary Assembly 32875 na Scaffold_528 unplaced-scaffold na na JBXXPX010000121.1 <> na Primary Assembly 31848 na Scaffold_529 unplaced-scaffold na na JBXXPX010000122.1 <> na Primary Assembly 31281 na Scaffold_530 unplaced-scaffold na na JBXXPX010000123.1 <> na Primary Assembly 31095 na Scaffold_531 unplaced-scaffold na na JBXXPX010000124.1 <> na Primary Assembly 31078 na Scaffold_532 unplaced-scaffold na na JBXXPX010000125.1 <> na Primary Assembly 30497 na Scaffold_533 unplaced-scaffold na na JBXXPX010000126.1 <> na Primary Assembly 29420 na Scaffold_534 unplaced-scaffold na na JBXXPX010000127.1 <> na Primary Assembly 29130 na Scaffold_208 unplaced-scaffold na na JBXXPX010000128.1 <> na Primary Assembly 28805 na Scaffold_536 unplaced-scaffold na na JBXXPX010000129.1 <> na Primary Assembly 28641 na Scaffold_537 unplaced-scaffold na na JBXXPX010000130.1 <> na Primary Assembly 28521 na Scaffold_538 unplaced-scaffold na na JBXXPX010000131.1 <> na Primary Assembly 28113 na Scaffold_539 unplaced-scaffold na na JBXXPX010000132.1 <> na Primary Assembly 27947 na Scaffold_540 unplaced-scaffold na na JBXXPX010000133.1 <> na Primary Assembly 27108 na Scaffold_541 unplaced-scaffold na na JBXXPX010000134.1 <> na Primary Assembly 26465 na Scaffold_542 unplaced-scaffold na na JBXXPX010000135.1 <> na Primary Assembly 26174 na Scaffold_543 unplaced-scaffold na na JBXXPX010000136.1 <> na Primary Assembly 25610 na Scaffold_544 unplaced-scaffold na na JBXXPX010000137.1 <> na Primary Assembly 25420 na Scaffold_211 unplaced-scaffold na na JBXXPX010000138.1 <> na Primary Assembly 25278 na Scaffold_546 unplaced-scaffold na na JBXXPX010000139.1 <> na Primary Assembly 24621 na Scaffold_547 unplaced-scaffold na na JBXXPX010000140.1 <> na Primary Assembly 24415 na Scaffold_548 unplaced-scaffold na na JBXXPX010000141.1 <> na Primary Assembly 23449 na Scaffold_549 unplaced-scaffold na na JBXXPX010000142.1 <> na Primary Assembly 23306 na Scaffold_550 unplaced-scaffold na na JBXXPX010000143.1 <> na Primary Assembly 21844 na Scaffold_551 unplaced-scaffold na na JBXXPX010000144.1 <> na Primary Assembly 21008 na Scaffold_552 unplaced-scaffold na na JBXXPX010000145.1 <> na Primary Assembly 20902 na Scaffold_213 unplaced-scaffold na na JBXXPX010000146.1 <> na Primary Assembly 20765 na Scaffold_554 unplaced-scaffold na na JBXXPX010000147.1 <> na Primary Assembly 19386 na Scaffold_555 unplaced-scaffold na na JBXXPX010000148.1 <> na Primary Assembly 19379 na Scaffold_556 unplaced-scaffold na na JBXXPX010000149.1 <> na Primary Assembly 16467 na Scaffold_214 unplaced-scaffold na na JBXXPX010000150.1 <> na Primary Assembly 11997 na