# Assembly name: rRhiLal1.hap1 # Organism name: Rhinotyphlops lalandei (snakes) # Isolate: rRhiLal1 # Taxid: 759953 # BioSample: SAMN55480804 # BioProject: PRJNA1425649 # Submitter: Vertebrate Genomes Project # Date: 2026-04-28 # Assembly type: haploid (haplotype 1) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JBXIVC01 # Assembly method: Hifiasm + Hi-C phasing v. 0.25.0 + galaxy0; yahs v. 1.2a.2 + galaxy2 # Expected final version: No # Genome coverage: 26.46x # Sequencing technology: PacBio Sequel II HiFi; Dovetail Omni-C # RefSeq category: Reference Genome # GenBank assembly accession: GCA_057127545.1 # Linked assembly: GCA_057127535.1 (haplotype 2) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_057127565.1 Primary Assembly ## GCA_057127575.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name SUPER_1 assembled-molecule 1 Chromosome CM169541.1 <> na Primary Assembly 381599300 na SUPER_2 assembled-molecule 2 Chromosome CM169542.1 <> na Primary Assembly 315473405 na SUPER_3 assembled-molecule 3 Chromosome CM169543.1 <> na Primary Assembly 236825263 na SUPER_4 assembled-molecule 4 Chromosome CM169544.1 <> na Primary Assembly 129503661 na SUPER_5 assembled-molecule 5 Chromosome CM169545.1 <> na Primary Assembly 128640813 na SUPER_6 assembled-molecule 6 Chromosome CM169546.1 <> na Primary Assembly 110976717 na SUPER_7 assembled-molecule 7 Chromosome CM169547.1 <> na Primary Assembly 92620390 na SUPER_8 assembled-molecule 8 Chromosome CM169548.1 <> na Primary Assembly 89427293 na SUPER_9 assembled-molecule 9 Chromosome CM169549.1 <> na Primary Assembly 39306506 na SUPER_10 assembled-molecule 10 Chromosome CM169550.1 <> na Primary Assembly 32738091 na SUPER_11 assembled-molecule 11 Chromosome CM169551.1 <> na Primary Assembly 31116713 na SUPER_12 assembled-molecule 12 Chromosome CM169552.1 <> na Primary Assembly 30589304 na SUPER_13 assembled-molecule 13 Chromosome CM169553.1 <> na Primary Assembly 27207401 na SUPER_14 assembled-molecule 14 Chromosome CM169554.1 <> na Primary Assembly 26274705 na SUPER_15 assembled-molecule 15 Chromosome CM169555.1 <> na Primary Assembly 25653554 na SUPER_12_unloc_1 unlocalized-scaffold 12 Chromosome JBXIVC010000017.1 <> na Primary Assembly 812442 na SUPER_12_unloc_3 unlocalized-scaffold 12 Chromosome JBXIVC010000018.1 <> na Primary Assembly 687889 na SUPER_12_unloc_4 unlocalized-scaffold 12 Chromosome JBXIVC010000019.1 <> na Primary Assembly 623965 na SUPER_12_unloc_5 unlocalized-scaffold 12 Chromosome JBXIVC010000020.1 <> na Primary Assembly 602367 na SUPER_12_unloc_6 unlocalized-scaffold 12 Chromosome JBXIVC010000021.1 <> na Primary Assembly 541777 na SUPER_12_unloc_7 unlocalized-scaffold 12 Chromosome JBXIVC010000022.1 <> na Primary Assembly 531904 na SUPER_12_unloc_8 unlocalized-scaffold 12 Chromosome JBXIVC010000023.1 <> na Primary Assembly 476926 na SUPER_12_unloc_2 unlocalized-scaffold 12 Chromosome JBXIVC010000024.1 <> na Primary Assembly 334845 na Scaffold_32 unplaced-scaffold na na JBXIVC010000025.1 <> na Primary Assembly 315503 na Scaffold_49 unplaced-scaffold na na JBXIVC010000026.1 <> na Primary Assembly 273596 na Scaffold_36 unplaced-scaffold na na JBXIVC010000027.1 <> na Primary Assembly 239533 na Scaffold_38 unplaced-scaffold na na JBXIVC010000028.1 <> na Primary Assembly 228874 na Scaffold_43 unplaced-scaffold na na JBXIVC010000029.1 <> na Primary Assembly 209207 na Scaffold_45 unplaced-scaffold na na JBXIVC010000030.1 <> na Primary Assembly 196463 na Scaffold_47 unplaced-scaffold na na JBXIVC010000031.1 <> na Primary Assembly 192587 na Scaffold_54 unplaced-scaffold na na JBXIVC010000032.1 <> na Primary Assembly 182251 na Scaffold_55 unplaced-scaffold na na JBXIVC010000033.1 <> na Primary Assembly 180805 na Scaffold_58 unplaced-scaffold na na JBXIVC010000034.1 <> na Primary Assembly 171156 na Scaffold_59 unplaced-scaffold na na JBXIVC010000035.1 <> na Primary Assembly 169788 na Scaffold_60 unplaced-scaffold na na JBXIVC010000036.1 <> na Primary Assembly 157960 na Scaffold_61 unplaced-scaffold na na JBXIVC010000037.1 <> na Primary Assembly 154537 na Scaffold_64 unplaced-scaffold na na JBXIVC010000038.1 <> na Primary Assembly 147666 na Scaffold_66 unplaced-scaffold na na JBXIVC010000039.1 <> na Primary Assembly 142974 na Scaffold_67 unplaced-scaffold na na JBXIVC010000040.1 <> na Primary Assembly 142676 na Scaffold_69 unplaced-scaffold na na JBXIVC010000041.1 <> na Primary Assembly 141385 na Scaffold_70 unplaced-scaffold na na JBXIVC010000042.1 <> na Primary Assembly 136892 na Scaffold_71 unplaced-scaffold na na JBXIVC010000043.1 <> na Primary Assembly 134385 na Scaffold_72 unplaced-scaffold na na JBXIVC010000044.1 <> na Primary Assembly 133995 na Scaffold_73 unplaced-scaffold na na JBXIVC010000045.1 <> na Primary Assembly 132898 na Scaffold_74 unplaced-scaffold na na JBXIVC010000046.1 <> na Primary Assembly 130623 na Scaffold_75 unplaced-scaffold na na JBXIVC010000047.1 <> na Primary Assembly 130222 na Scaffold_76 unplaced-scaffold na na JBXIVC010000048.1 <> na Primary Assembly 129109 na Scaffold_78 unplaced-scaffold na na JBXIVC010000049.1 <> na Primary Assembly 120231 na Scaffold_80 unplaced-scaffold na na JBXIVC010000050.1 <> na Primary Assembly 112733 na Scaffold_81 unplaced-scaffold na na JBXIVC010000051.1 <> na Primary Assembly 107196 na Scaffold_82 unplaced-scaffold na na JBXIVC010000052.1 <> na Primary Assembly 104988 na Scaffold_85 unplaced-scaffold na na JBXIVC010000053.1 <> na Primary Assembly 102368 na Scaffold_86 unplaced-scaffold na na JBXIVC010000054.1 <> na Primary Assembly 97264 na Scaffold_88 unplaced-scaffold na na JBXIVC010000055.1 <> na Primary Assembly 96498 na Scaffold_92 unplaced-scaffold na na JBXIVC010000056.1 <> na Primary Assembly 92527 na Scaffold_95 unplaced-scaffold na na JBXIVC010000057.1 <> na Primary Assembly 85462 na Scaffold_96 unplaced-scaffold na na JBXIVC010000058.1 <> na Primary Assembly 84794 na Scaffold_100 unplaced-scaffold na na JBXIVC010000059.1 <> na Primary Assembly 78910 na Scaffold_241 unplaced-scaffold na na JBXIVC010000060.1 <> na Primary Assembly 75460 na Scaffold_102 unplaced-scaffold na na JBXIVC010000061.1 <> na Primary Assembly 75237 na Scaffold_239 unplaced-scaffold na na JBXIVC010000062.1 <> na Primary Assembly 72825 na Scaffold_104 unplaced-scaffold na na JBXIVC010000063.1 <> na Primary Assembly 70051 na Scaffold_174 unplaced-scaffold na na JBXIVC010000064.1 <> na Primary Assembly 60551 na Scaffold_110 unplaced-scaffold na na JBXIVC010000065.1 <> na Primary Assembly 55689 na Scaffold_172 unplaced-scaffold na na JBXIVC010000066.1 <> na Primary Assembly 54631 na Scaffold_171 unplaced-scaffold na na JBXIVC010000067.1 <> na Primary Assembly 53650 na Scaffold_170 unplaced-scaffold na na JBXIVC010000068.1 <> na Primary Assembly 50820 na Scaffold_114 unplaced-scaffold na na JBXIVC010000069.1 <> na Primary Assembly 50518 na Scaffold_168 unplaced-scaffold na na JBXIVC010000070.1 <> na Primary Assembly 50279 na Scaffold_115 unplaced-scaffold na na JBXIVC010000071.1 <> na Primary Assembly 49844 na Scaffold_166 unplaced-scaffold na na JBXIVC010000072.1 <> na Primary Assembly 44944 na Scaffold_165 unplaced-scaffold na na JBXIVC010000073.1 <> na Primary Assembly 41778 na Scaffold_122 unplaced-scaffold na na JBXIVC010000074.1 <> na Primary Assembly 41347 na Scaffold_123 unplaced-scaffold na na JBXIVC010000075.1 <> na Primary Assembly 40374 na Scaffold_124 unplaced-scaffold na na JBXIVC010000076.1 <> na Primary Assembly 40041 na Scaffold_161 unplaced-scaffold na na JBXIVC010000077.1 <> na Primary Assembly 39802 na Scaffold_160 unplaced-scaffold na na JBXIVC010000078.1 <> na Primary Assembly 38051 na Scaffold_127 unplaced-scaffold na na JBXIVC010000079.1 <> na Primary Assembly 37531 na Scaffold_158 unplaced-scaffold na na JBXIVC010000080.1 <> na Primary Assembly 37108 na Scaffold_128 unplaced-scaffold na na JBXIVC010000081.1 <> na Primary Assembly 36119 na Scaffold_156 unplaced-scaffold na na JBXIVC010000082.1 <> na Primary Assembly 35619 na Scaffold_129 unplaced-scaffold na na JBXIVC010000083.1 <> na Primary Assembly 34216 na Scaffold_154 unplaced-scaffold na na JBXIVC010000084.1 <> na Primary Assembly 33712 na Scaffold_130 unplaced-scaffold na na JBXIVC010000085.1 <> na Primary Assembly 32472 na Scaffold_152 unplaced-scaffold na na JBXIVC010000086.1 <> na Primary Assembly 32115 na Scaffold_151 unplaced-scaffold na na JBXIVC010000087.1 <> na Primary Assembly 31695 na Scaffold_131 unplaced-scaffold na na JBXIVC010000088.1 <> na Primary Assembly 31129 na Scaffold_149 unplaced-scaffold na na JBXIVC010000089.1 <> na Primary Assembly 31006 na Scaffold_148 unplaced-scaffold na na JBXIVC010000090.1 <> na Primary Assembly 30000 na Scaffold_147 unplaced-scaffold na na JBXIVC010000091.1 <> na Primary Assembly 29548 na Scaffold_146 unplaced-scaffold na na JBXIVC010000092.1 <> na Primary Assembly 28392 na Scaffold_145 unplaced-scaffold na na JBXIVC010000093.1 <> na Primary Assembly 28247 na Scaffold_144 unplaced-scaffold na na JBXIVC010000094.1 <> na Primary Assembly 27968 na Scaffold_133 unplaced-scaffold na na JBXIVC010000095.1 <> na Primary Assembly 27318 na Scaffold_205 unplaced-scaffold na na JBXIVC010000096.1 <> na Primary Assembly 25713 na Scaffold_204 unplaced-scaffold na na JBXIVC010000097.1 <> na Primary Assembly 25076 na Scaffold_134 unplaced-scaffold na na JBXIVC010000098.1 <> na Primary Assembly 24356 na Scaffold_202 unplaced-scaffold na na JBXIVC010000099.1 <> na Primary Assembly 23482 na Scaffold_201 unplaced-scaffold na na JBXIVC010000100.1 <> na Primary Assembly 23478 na Scaffold_135 unplaced-scaffold na na JBXIVC010000101.1 <> na Primary Assembly 23423 na Scaffold_199 unplaced-scaffold na na JBXIVC010000102.1 <> na Primary Assembly 23373 na Scaffold_198 unplaced-scaffold na na JBXIVC010000103.1 <> na Primary Assembly 22738 na Scaffold_197 unplaced-scaffold na na JBXIVC010000104.1 <> na Primary Assembly 22551 na Scaffold_196 unplaced-scaffold na na JBXIVC010000105.1 <> na Primary Assembly 21077 na Scaffold_195 unplaced-scaffold na na JBXIVC010000106.1 <> na Primary Assembly 21074 na Scaffold_137 unplaced-scaffold na na JBXIVC010000107.1 <> na Primary Assembly 20576 na Scaffold_193 unplaced-scaffold na na JBXIVC010000108.1 <> na Primary Assembly 19981 na Scaffold_192 unplaced-scaffold na na JBXIVC010000109.1 <> na Primary Assembly 19756 na Scaffold_138 unplaced-scaffold na na JBXIVC010000110.1 <> na Primary Assembly 19755 na Scaffold_175 unplaced-scaffold na na JBXIVC010000111.1 <> na Primary Assembly 19555 na Scaffold_189 unplaced-scaffold na na JBXIVC010000112.1 <> na Primary Assembly 19282 na Scaffold_188 unplaced-scaffold na na JBXIVC010000113.1 <> na Primary Assembly 18592 na Scaffold_187 unplaced-scaffold na na JBXIVC010000114.1 <> na Primary Assembly 17577 na Scaffold_140 unplaced-scaffold na na JBXIVC010000115.1 <> na Primary Assembly 16336 na Scaffold_185 unplaced-scaffold na na JBXIVC010000116.1 <> na Primary Assembly 15988 na Scaffold_184 unplaced-scaffold na na JBXIVC010000117.1 <> na Primary Assembly 15373 na Scaffold_183 unplaced-scaffold na na JBXIVC010000118.1 <> na Primary Assembly 15087 na Scaffold_182 unplaced-scaffold na na JBXIVC010000119.1 <> na Primary Assembly 15044 na Scaffold_141 unplaced-scaffold na na JBXIVC010000120.1 <> na Primary Assembly 14854 na Scaffold_180 unplaced-scaffold na na JBXIVC010000121.1 <> na Primary Assembly 14828 na Scaffold_179 unplaced-scaffold na na JBXIVC010000122.1 <> na Primary Assembly 14773 na Scaffold_178 unplaced-scaffold na na JBXIVC010000123.1 <> na Primary Assembly 14435 na Scaffold_177 unplaced-scaffold na na JBXIVC010000124.1 <> na Primary Assembly 10383 na Scaffold_142 unplaced-scaffold na na JBXIVC010000125.1 <> na Primary Assembly 10301 na ptg000001l_rotated assembled-molecule MT Mitochondrion CM169556.1 <> na non-nuclear 16339 na