# Assembly name:  mMyoNes1.hap2
# Organism name:  Myotis nesopolus (Cucacao Myotis)
# Isolate:  mMyoNes1
# Sex:  male
# Taxid:          1163727
# BioSample:      SAMN54684658
# BioProject:     PRJNA1403629
# Submitter:      Bat1K Project
# Date:           2026-01-30
# Assembly type:  haploid (haplotype 2)
# Release type:   major
# Assembly level: Chromosome
# Genome representation: full
# WGS project:    JBTVNJ01
# Assembly method: Hifiasm + Hi-C phasing v. 0.19.8 + galaxy0; yahs v. 1.2a.2 + galaxy1
# Expected final version: No
# Genome coverage: 42.53x
# Sequencing technology: PacBio Sequel II HiFi; Arima Hi-C v2
# RefSeq category: Reference Genome
# GenBank assembly accession: GCA_054855975.1
# Linked assembly: GCA_054855985.1 (haplotype 1)
#
## Assembly-Units:
## GenBank Unit Accession	RefSeq Unit Accession	Assembly-Unit name
## GCA_054856065.1		Primary Assembly
#
# Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by
# unlocalized scaffolds.
# Unplaced scaffolds are listed at the end.
# RefSeq is equal or derived from GenBank object.
#
# Sequence-Name	Sequence-Role	Assigned-Molecule	Assigned-Molecule-Location/Type	GenBank-Accn	Relationship	RefSeq-Accn	Assembly-Unit	Sequence-Length	UCSC-style-name
SUPER_1	assembled-molecule	1	Chromosome	CM141858.1	<>	na	Primary Assembly	242766960	na
SUPER_2	assembled-molecule	2	Chromosome	CM141859.1	<>	na	Primary Assembly	218113938	na
SUPER_3	assembled-molecule	3	Chromosome	CM141860.1	<>	na	Primary Assembly	218600893	na
SUPER_4	assembled-molecule	4	Chromosome	CM141861.1	<>	na	Primary Assembly	117786792	na
SUPER_5	assembled-molecule	5	Chromosome	CM141862.1	<>	na	Primary Assembly	111219099	na
SUPER_6	assembled-molecule	6	Chromosome	CM141863.1	<>	na	Primary Assembly	106113307	na
SUPER_7	assembled-molecule	7	Chromosome	CM141864.1	<>	na	Primary Assembly	100294998	na
SUPER_8	assembled-molecule	8	Chromosome	CM141865.1	<>	na	Primary Assembly	96743871	na
SUPER_9	assembled-molecule	9	Chromosome	CM141866.1	<>	na	Primary Assembly	87690430	na
SUPER_10	assembled-molecule	10	Chromosome	CM141867.1	<>	na	Primary Assembly	85846813	na
SUPER_11	assembled-molecule	11	Chromosome	CM141868.1	<>	na	Primary Assembly	80996009	na
SUPER_12	assembled-molecule	12	Chromosome	CM141869.1	<>	na	Primary Assembly	77124245	na
SUPER_13	assembled-molecule	13	Chromosome	CM141870.1	<>	na	Primary Assembly	65038078	na
SUPER_14	assembled-molecule	14	Chromosome	CM141871.1	<>	na	Primary Assembly	61245420	na
SUPER_15	assembled-molecule	15	Chromosome	CM141872.1	<>	na	Primary Assembly	57938713	na
SUPER_16	assembled-molecule	16	Chromosome	CM141873.1	<>	na	Primary Assembly	57481686	na
SUPER_17	assembled-molecule	17	Chromosome	CM141874.1	<>	na	Primary Assembly	55950921	na
SUPER_18	assembled-molecule	18	Chromosome	CM141875.1	<>	na	Primary Assembly	47693911	na
SUPER_19	assembled-molecule	19	Chromosome	CM141876.1	<>	na	Primary Assembly	28939838	na
SUPER_20	assembled-molecule	20	Chromosome	CM141877.1	<>	na	Primary Assembly	23426472	na
SUPER_21	assembled-molecule	21	Chromosome	CM141878.1	<>	na	Primary Assembly	15771154	na
SUPER_1_unloc_3	unlocalized-scaffold	1	Chromosome	JBTVNJ010000023.1	<>	na	Primary Assembly	3627804	na
SUPER_1_unloc_2	unlocalized-scaffold	1	Chromosome	JBTVNJ010000026.1	<>	na	Primary Assembly	1953967	na
SUPER_1_unloc_4	unlocalized-scaffold	1	Chromosome	JBTVNJ010000030.1	<>	na	Primary Assembly	1428936	na
SUPER_1_unloc_5	unlocalized-scaffold	1	Chromosome	JBTVNJ010000035.1	<>	na	Primary Assembly	1064554	na
SUPER_1_unloc_1	unlocalized-scaffold	1	Chromosome	JBTVNJ010000045.1	<>	na	Primary Assembly	645166	na
SUPER_2_unloc_1	unlocalized-scaffold	2	Chromosome	JBTVNJ010000059.1	<>	na	Primary Assembly	372287	na
SUPER_5_unloc_1	unlocalized-scaffold	5	Chromosome	JBTVNJ010000082.1	<>	na	Primary Assembly	177334	na
SUPER_12_unloc_1	unlocalized-scaffold	12	Chromosome	JBTVNJ010000044.1	<>	na	Primary Assembly	655571	na
SUPER_17_unloc_1	unlocalized-scaffold	17	Chromosome	JBTVNJ010000039.1	<>	na	Primary Assembly	904706	na
SUPER_17_unloc_2	unlocalized-scaffold	17	Chromosome	JBTVNJ010000043.1	<>	na	Primary Assembly	696663	na
SUPER_17_unloc_3	unlocalized-scaffold	17	Chromosome	JBTVNJ010000047.1	<>	na	Primary Assembly	592998	na
SUPER_17_unloc_6	unlocalized-scaffold	17	Chromosome	JBTVNJ010000054.1	<>	na	Primary Assembly	466890	na
SUPER_17_unloc_4	unlocalized-scaffold	17	Chromosome	JBTVNJ010000056.1	<>	na	Primary Assembly	425584	na
SUPER_17_unloc_5	unlocalized-scaffold	17	Chromosome	JBTVNJ010000057.1	<>	na	Primary Assembly	390192	na
SUPER_17_unloc_7	unlocalized-scaffold	17	Chromosome	JBTVNJ010000061.1	<>	na	Primary Assembly	324232	na
Scaffold_47	unplaced-scaffold	na	na	JBTVNJ010000022.1	<>	na	Primary Assembly	3632383	na
Scaffold_45	unplaced-scaffold	na	na	JBTVNJ010000024.1	<>	na	Primary Assembly	3598398	na
Scaffold_56	unplaced-scaffold	na	na	JBTVNJ010000025.1	<>	na	Primary Assembly	2343409	na
Scaffold_68	unplaced-scaffold	na	na	JBTVNJ010000027.1	<>	na	Primary Assembly	1939887	na
Scaffold_73	unplaced-scaffold	na	na	JBTVNJ010000028.1	<>	na	Primary Assembly	1647708	na
Scaffold_74	unplaced-scaffold	na	na	JBTVNJ010000029.1	<>	na	Primary Assembly	1496105	na
Scaffold_49	unplaced-scaffold	na	na	JBTVNJ010000031.1	<>	na	Primary Assembly	1319597	na
Scaffold_58	unplaced-scaffold	na	na	JBTVNJ010000032.1	<>	na	Primary Assembly	1284377	na
Scaffold_62	unplaced-scaffold	na	na	JBTVNJ010000033.1	<>	na	Primary Assembly	1254170	na
Scaffold_63	unplaced-scaffold	na	na	JBTVNJ010000034.1	<>	na	Primary Assembly	1114540	na
Scaffold_70	unplaced-scaffold	na	na	JBTVNJ010000036.1	<>	na	Primary Assembly	1051000	na
Scaffold_78	unplaced-scaffold	na	na	JBTVNJ010000037.1	<>	na	Primary Assembly	928243	na
Scaffold_61	unplaced-scaffold	na	na	JBTVNJ010000038.1	<>	na	Primary Assembly	920077	na
Scaffold_59	unplaced-scaffold	na	na	JBTVNJ010000040.1	<>	na	Primary Assembly	883010	na
Scaffold_79	unplaced-scaffold	na	na	JBTVNJ010000041.1	<>	na	Primary Assembly	806738	na
Scaffold_82	unplaced-scaffold	na	na	JBTVNJ010000042.1	<>	na	Primary Assembly	715988	na
Scaffold_85	unplaced-scaffold	na	na	JBTVNJ010000046.1	<>	na	Primary Assembly	639047	na
Scaffold_87	unplaced-scaffold	na	na	JBTVNJ010000048.1	<>	na	Primary Assembly	592693	na
Scaffold_88	unplaced-scaffold	na	na	JBTVNJ010000049.1	<>	na	Primary Assembly	583742	na
Scaffold_89	unplaced-scaffold	na	na	JBTVNJ010000050.1	<>	na	Primary Assembly	579765	na
Scaffold_90	unplaced-scaffold	na	na	JBTVNJ010000051.1	<>	na	Primary Assembly	556053	na
Scaffold_91	unplaced-scaffold	na	na	JBTVNJ010000052.1	<>	na	Primary Assembly	545961	na
Scaffold_93	unplaced-scaffold	na	na	JBTVNJ010000053.1	<>	na	Primary Assembly	526469	na
Scaffold_97	unplaced-scaffold	na	na	JBTVNJ010000055.1	<>	na	Primary Assembly	433188	na
Scaffold_99	unplaced-scaffold	na	na	JBTVNJ010000058.1	<>	na	Primary Assembly	384819	na
Scaffold_101	unplaced-scaffold	na	na	JBTVNJ010000060.1	<>	na	Primary Assembly	369763	na
Scaffold_110	unplaced-scaffold	na	na	JBTVNJ010000062.1	<>	na	Primary Assembly	315084	na
Scaffold_112	unplaced-scaffold	na	na	JBTVNJ010000063.1	<>	na	Primary Assembly	305549	na
Scaffold_113	unplaced-scaffold	na	na	JBTVNJ010000064.1	<>	na	Primary Assembly	304199	na
Scaffold_114	unplaced-scaffold	na	na	JBTVNJ010000065.1	<>	na	Primary Assembly	303714	na
Scaffold_115	unplaced-scaffold	na	na	JBTVNJ010000066.1	<>	na	Primary Assembly	300615	na
Scaffold_118	unplaced-scaffold	na	na	JBTVNJ010000067.1	<>	na	Primary Assembly	278146	na
Scaffold_120	unplaced-scaffold	na	na	JBTVNJ010000068.1	<>	na	Primary Assembly	275433	na
Scaffold_125	unplaced-scaffold	na	na	JBTVNJ010000069.1	<>	na	Primary Assembly	261974	na
Scaffold_126	unplaced-scaffold	na	na	JBTVNJ010000070.1	<>	na	Primary Assembly	260749	na
Scaffold_128	unplaced-scaffold	na	na	JBTVNJ010000071.1	<>	na	Primary Assembly	255424	na
Scaffold_133	unplaced-scaffold	na	na	JBTVNJ010000072.1	<>	na	Primary Assembly	247906	na
Scaffold_135	unplaced-scaffold	na	na	JBTVNJ010000073.1	<>	na	Primary Assembly	236137	na
Scaffold_136	unplaced-scaffold	na	na	JBTVNJ010000074.1	<>	na	Primary Assembly	230125	na
Scaffold_143	unplaced-scaffold	na	na	JBTVNJ010000075.1	<>	na	Primary Assembly	207986	na
Scaffold_146	unplaced-scaffold	na	na	JBTVNJ010000076.1	<>	na	Primary Assembly	195290	na
Scaffold_149	unplaced-scaffold	na	na	JBTVNJ010000077.1	<>	na	Primary Assembly	186621	na
Scaffold_150	unplaced-scaffold	na	na	JBTVNJ010000078.1	<>	na	Primary Assembly	186197	na
Scaffold_151	unplaced-scaffold	na	na	JBTVNJ010000079.1	<>	na	Primary Assembly	180715	na
Scaffold_152	unplaced-scaffold	na	na	JBTVNJ010000080.1	<>	na	Primary Assembly	179463	na
Scaffold_153	unplaced-scaffold	na	na	JBTVNJ010000081.1	<>	na	Primary Assembly	178440	na
Scaffold_158	unplaced-scaffold	na	na	JBTVNJ010000083.1	<>	na	Primary Assembly	168374	na
Scaffold_162	unplaced-scaffold	na	na	JBTVNJ010000084.1	<>	na	Primary Assembly	165353	na
Scaffold_164	unplaced-scaffold	na	na	JBTVNJ010000085.1	<>	na	Primary Assembly	152558	na
Scaffold_165	unplaced-scaffold	na	na	JBTVNJ010000086.1	<>	na	Primary Assembly	152298	na
Scaffold_166	unplaced-scaffold	na	na	JBTVNJ010000087.1	<>	na	Primary Assembly	152030	na
Scaffold_167	unplaced-scaffold	na	na	JBTVNJ010000088.1	<>	na	Primary Assembly	146721	na
Scaffold_170	unplaced-scaffold	na	na	JBTVNJ010000089.1	<>	na	Primary Assembly	141549	na
Scaffold_171	unplaced-scaffold	na	na	JBTVNJ010000090.1	<>	na	Primary Assembly	141029	na
Scaffold_172	unplaced-scaffold	na	na	JBTVNJ010000091.1	<>	na	Primary Assembly	140027	na
Scaffold_174	unplaced-scaffold	na	na	JBTVNJ010000092.1	<>	na	Primary Assembly	137763	na
Scaffold_175	unplaced-scaffold	na	na	JBTVNJ010000093.1	<>	na	Primary Assembly	135168	na
Scaffold_176	unplaced-scaffold	na	na	JBTVNJ010000094.1	<>	na	Primary Assembly	131843	na
Scaffold_178	unplaced-scaffold	na	na	JBTVNJ010000095.1	<>	na	Primary Assembly	126056	na
Scaffold_179	unplaced-scaffold	na	na	JBTVNJ010000096.1	<>	na	Primary Assembly	123465	na
Scaffold_180	unplaced-scaffold	na	na	JBTVNJ010000097.1	<>	na	Primary Assembly	123355	na
Scaffold_184	unplaced-scaffold	na	na	JBTVNJ010000098.1	<>	na	Primary Assembly	116687	na
Scaffold_185	unplaced-scaffold	na	na	JBTVNJ010000099.1	<>	na	Primary Assembly	116114	na
Scaffold_187	unplaced-scaffold	na	na	JBTVNJ010000100.1	<>	na	Primary Assembly	114879	na
Scaffold_188	unplaced-scaffold	na	na	JBTVNJ010000101.1	<>	na	Primary Assembly	114204	na
Scaffold_189	unplaced-scaffold	na	na	JBTVNJ010000102.1	<>	na	Primary Assembly	112370	na
Scaffold_595	unplaced-scaffold	na	na	JBTVNJ010000103.1	<>	na	Primary Assembly	111425	na
Scaffold_190	unplaced-scaffold	na	na	JBTVNJ010000104.1	<>	na	Primary Assembly	111217	na
Scaffold_191	unplaced-scaffold	na	na	JBTVNJ010000105.1	<>	na	Primary Assembly	111165	na
Scaffold_193	unplaced-scaffold	na	na	JBTVNJ010000106.1	<>	na	Primary Assembly	109576	na
Scaffold_194	unplaced-scaffold	na	na	JBTVNJ010000107.1	<>	na	Primary Assembly	106887	na
Scaffold_600	unplaced-scaffold	na	na	JBTVNJ010000108.1	<>	na	Primary Assembly	106604	na
Scaffold_196	unplaced-scaffold	na	na	JBTVNJ010000109.1	<>	na	Primary Assembly	104801	na
Scaffold_199	unplaced-scaffold	na	na	JBTVNJ010000110.1	<>	na	Primary Assembly	100816	na
Scaffold_603	unplaced-scaffold	na	na	JBTVNJ010000111.1	<>	na	Primary Assembly	95246	na
Scaffold_203	unplaced-scaffold	na	na	JBTVNJ010000112.1	<>	na	Primary Assembly	92936	na
Scaffold_204	unplaced-scaffold	na	na	JBTVNJ010000113.1	<>	na	Primary Assembly	92535	na
Scaffold_205	unplaced-scaffold	na	na	JBTVNJ010000114.1	<>	na	Primary Assembly	91631	na
Scaffold_206	unplaced-scaffold	na	na	JBTVNJ010000115.1	<>	na	Primary Assembly	90862	na
Scaffold_608	unplaced-scaffold	na	na	JBTVNJ010000116.1	<>	na	Primary Assembly	85356	na
Scaffold_209	unplaced-scaffold	na	na	JBTVNJ010000117.1	<>	na	Primary Assembly	85012	na
Scaffold_212	unplaced-scaffold	na	na	JBTVNJ010000118.1	<>	na	Primary Assembly	82522	na
Scaffold_611	unplaced-scaffold	na	na	JBTVNJ010000119.1	<>	na	Primary Assembly	79462	na
Scaffold_214	unplaced-scaffold	na	na	JBTVNJ010000120.1	<>	na	Primary Assembly	77760	na
Scaffold_215	unplaced-scaffold	na	na	JBTVNJ010000121.1	<>	na	Primary Assembly	76984	na
Scaffold_216	unplaced-scaffold	na	na	JBTVNJ010000122.1	<>	na	Primary Assembly	75097	na
Scaffold_615	unplaced-scaffold	na	na	JBTVNJ010000123.1	<>	na	Primary Assembly	71793	na
Scaffold_218	unplaced-scaffold	na	na	JBTVNJ010000124.1	<>	na	Primary Assembly	70819	na
Scaffold_617	unplaced-scaffold	na	na	JBTVNJ010000125.1	<>	na	Primary Assembly	70585	na
Scaffold_219	unplaced-scaffold	na	na	JBTVNJ010000126.1	<>	na	Primary Assembly	70281	na
Scaffold_221	unplaced-scaffold	na	na	JBTVNJ010000127.1	<>	na	Primary Assembly	66663	na
Scaffold_620	unplaced-scaffold	na	na	JBTVNJ010000128.1	<>	na	Primary Assembly	66390	na
Scaffold_222	unplaced-scaffold	na	na	JBTVNJ010000129.1	<>	na	Primary Assembly	65612	na
Scaffold_622	unplaced-scaffold	na	na	JBTVNJ010000130.1	<>	na	Primary Assembly	64325	na
Scaffold_623	unplaced-scaffold	na	na	JBTVNJ010000131.1	<>	na	Primary Assembly	63023	na
Scaffold_624	unplaced-scaffold	na	na	JBTVNJ010000132.1	<>	na	Primary Assembly	58353	na
Scaffold_625	unplaced-scaffold	na	na	JBTVNJ010000133.1	<>	na	Primary Assembly	48715	na
Scaffold_233	unplaced-scaffold	na	na	JBTVNJ010000134.1	<>	na	Primary Assembly	45290	na
Scaffold_627	unplaced-scaffold	na	na	JBTVNJ010000135.1	<>	na	Primary Assembly	45108	na
Scaffold_628	unplaced-scaffold	na	na	JBTVNJ010000136.1	<>	na	Primary Assembly	45048	na
Scaffold_629	unplaced-scaffold	na	na	JBTVNJ010000137.1	<>	na	Primary Assembly	44911	na
Scaffold_236	unplaced-scaffold	na	na	JBTVNJ010000138.1	<>	na	Primary Assembly	44730	na
Scaffold_631	unplaced-scaffold	na	na	JBTVNJ010000139.1	<>	na	Primary Assembly	43058	na
Scaffold_632	unplaced-scaffold	na	na	JBTVNJ010000140.1	<>	na	Primary Assembly	40877	na
Scaffold_238	unplaced-scaffold	na	na	JBTVNJ010000141.1	<>	na	Primary Assembly	40722	na
Scaffold_240	unplaced-scaffold	na	na	JBTVNJ010000142.1	<>	na	Primary Assembly	37561	na
Scaffold_635	unplaced-scaffold	na	na	JBTVNJ010000143.1	<>	na	Primary Assembly	36956	na
Scaffold_241	unplaced-scaffold	na	na	JBTVNJ010000144.1	<>	na	Primary Assembly	35825	na
Scaffold_637	unplaced-scaffold	na	na	JBTVNJ010000145.1	<>	na	Primary Assembly	35300	na
Scaffold_638	unplaced-scaffold	na	na	JBTVNJ010000146.1	<>	na	Primary Assembly	34401	na
Scaffold_639	unplaced-scaffold	na	na	JBTVNJ010000147.1	<>	na	Primary Assembly	34153	na
Scaffold_640	unplaced-scaffold	na	na	JBTVNJ010000148.1	<>	na	Primary Assembly	32724	na
Scaffold_641	unplaced-scaffold	na	na	JBTVNJ010000149.1	<>	na	Primary Assembly	27013	na
Scaffold_244	unplaced-scaffold	na	na	JBTVNJ010000150.1	<>	na	Primary Assembly	23598	na