# Assembly name: mIaxIox2.hap2 # Organism name: Ia io (Great evening bat) # Isolate: mIaxIox2 # Sex: male # Taxid: 360967 # BioSample: SAMN54208066 # BioProject: PRJNA1390878 # Submitter: Bat1K Project # Date: 2026-01-29 # Assembly type: haploid (haplotype 2) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JBTBFC01 # Assembly method: Hifiasm + Hi-C phasing v. 0.19.8 + galaxy0; yahs v. 1.2a.2 + galaxy1 # Expected final version: No # Genome coverage: 36.05x # Sequencing technology: PacBio Sequel II HiFi; Arima Hi-C v2 # GenBank assembly accession: GCA_054824975.1 # Linked assembly: GCA_054824925.1 (haplotype 1) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_054824985.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name SUPER_1 assembled-molecule 1 Chromosome CM139594.1 <> na Primary Assembly 124457861 na SUPER_2 assembled-molecule 2 Chromosome CM139595.1 <> na Primary Assembly 125348476 na SUPER_3 assembled-molecule 3 Chromosome CM139596.1 <> na Primary Assembly 124863150 na SUPER_4 assembled-molecule 4 Chromosome CM139597.1 <> na Primary Assembly 120240997 na SUPER_5 assembled-molecule 5 Chromosome CM139598.1 <> na Primary Assembly 116624668 na SUPER_6 assembled-molecule 6 Chromosome CM139599.1 <> na Primary Assembly 119464938 na SUPER_7 assembled-molecule 7 Chromosome CM139600.1 <> na Primary Assembly 115886248 na SUPER_8 assembled-molecule 8 Chromosome CM139601.1 <> na Primary Assembly 109936826 na SUPER_9 assembled-molecule 9 Chromosome CM139602.1 <> na Primary Assembly 100497154 na SUPER_10 assembled-molecule 10 Chromosome CM139603.1 <> na Primary Assembly 97251615 na SUPER_11 assembled-molecule 11 Chromosome CM139604.1 <> na Primary Assembly 95540562 na SUPER_12 assembled-molecule 12 Chromosome CM139605.1 <> na Primary Assembly 95487416 na SUPER_13 assembled-molecule 13 Chromosome CM139606.1 <> na Primary Assembly 90301915 na SUPER_14 assembled-molecule 14 Chromosome CM139607.1 <> na Primary Assembly 80280073 na SUPER_15 assembled-molecule 15 Chromosome CM139608.1 <> na Primary Assembly 74603881 na SUPER_16 assembled-molecule 16 Chromosome CM139609.1 <> na Primary Assembly 65224490 na SUPER_17 assembled-molecule 17 Chromosome CM139610.1 <> na Primary Assembly 64069047 na SUPER_18 assembled-molecule 18 Chromosome CM139611.1 <> na Primary Assembly 60374116 na SUPER_19 assembled-molecule 19 Chromosome CM139612.1 <> na Primary Assembly 57016620 na SUPER_20 assembled-molecule 20 Chromosome CM139613.1 <> na Primary Assembly 54047507 na SUPER_21 assembled-molecule 21 Chromosome CM139614.1 <> na Primary Assembly 50001661 na SUPER_22 assembled-molecule 22 Chromosome CM139615.1 <> na Primary Assembly 18955639 na SUPER_23 assembled-molecule 23 Chromosome CM139616.1 <> na Primary Assembly 31139465 na SUPER_24 assembled-molecule 24 Chromosome CM139617.1 <> na Primary Assembly 18843557 na SUPER_1_unloc_3 unlocalized-scaffold 1 Chromosome JBTBFC010000058.1 <> na Primary Assembly 1031611 na SUPER_1_unloc_1 unlocalized-scaffold 1 Chromosome JBTBFC010000061.1 <> na Primary Assembly 952221 na SUPER_1_unloc_4 unlocalized-scaffold 1 Chromosome JBTBFC010000068.1 <> na Primary Assembly 820078 na SUPER_1_unloc_2 unlocalized-scaffold 1 Chromosome JBTBFC010000073.1 <> na Primary Assembly 641954 na SUPER_2_unloc_1 unlocalized-scaffold 2 Chromosome JBTBFC010000057.1 <> na Primary Assembly 1034008 na SUPER_2_unloc_2 unlocalized-scaffold 2 Chromosome JBTBFC010000064.1 <> na Primary Assembly 882838 na SUPER_6_unloc_1 unlocalized-scaffold 6 Chromosome JBTBFC010000030.1 <> na Primary Assembly 3657419 na SUPER_14_unloc_1 unlocalized-scaffold 14 Chromosome JBTBFC010000025.1 <> na Primary Assembly 5880659 na SUPER_15_unloc_1 unlocalized-scaffold 15 Chromosome JBTBFC010000109.1 <> na Primary Assembly 180901 na SUPER_15_unloc_2 unlocalized-scaffold 15 Chromosome JBTBFC010000161.1 <> na Primary Assembly 62482 na SUPER_16_unloc_2 unlocalized-scaffold 16 Chromosome JBTBFC010000050.1 <> na Primary Assembly 1507989 na SUPER_16_unloc_1 unlocalized-scaffold 16 Chromosome JBTBFC010000067.1 <> na Primary Assembly 839939 na SUPER_16_unloc_3 unlocalized-scaffold 16 Chromosome JBTBFC010000086.1 <> na Primary Assembly 329551 na SUPER_18_unloc_1 unlocalized-scaffold 18 Chromosome JBTBFC010000032.1 <> na Primary Assembly 3476520 na SUPER_18_unloc_2 unlocalized-scaffold 18 Chromosome JBTBFC010000039.1 <> na Primary Assembly 2312659 na SUPER_18_unloc_3 unlocalized-scaffold 18 Chromosome JBTBFC010000062.1 <> na Primary Assembly 911894 na SUPER_20_unloc_2 unlocalized-scaffold 20 Chromosome JBTBFC010000088.1 <> na Primary Assembly 318604 na SUPER_20_unloc_1 unlocalized-scaffold 20 Chromosome JBTBFC010000116.1 <> na Primary Assembly 144475 na SUPER_22_unloc_3 unlocalized-scaffold 22 Chromosome JBTBFC010000026.1 <> na Primary Assembly 5060235 na SUPER_22_unloc_2 unlocalized-scaffold 22 Chromosome JBTBFC010000066.1 <> na Primary Assembly 861950 na SUPER_22_unloc_1 unlocalized-scaffold 22 Chromosome JBTBFC010000074.1 <> na Primary Assembly 566333 na SUPER_24_unloc_1 unlocalized-scaffold 24 Chromosome JBTBFC010000040.1 <> na Primary Assembly 2253913 na Scaffold_60 unplaced-scaffold na na JBTBFC010000027.1 <> na Primary Assembly 4550934 na Scaffold_62 unplaced-scaffold na na JBTBFC010000028.1 <> na Primary Assembly 4319995 na Scaffold_52 unplaced-scaffold na na JBTBFC010000029.1 <> na Primary Assembly 3886875 na Scaffold_68 unplaced-scaffold na na JBTBFC010000031.1 <> na Primary Assembly 3567460 na Scaffold_59 unplaced-scaffold na na JBTBFC010000033.1 <> na Primary Assembly 3337860 na Scaffold_70 unplaced-scaffold na na JBTBFC010000034.1 <> na Primary Assembly 2899269 na Scaffold_72 unplaced-scaffold na na JBTBFC010000035.1 <> na Primary Assembly 2764441 na Scaffold_73 unplaced-scaffold na na JBTBFC010000036.1 <> na Primary Assembly 2692307 na Scaffold_75 unplaced-scaffold na na JBTBFC010000037.1 <> na Primary Assembly 2441105 na Scaffold_76 unplaced-scaffold na na JBTBFC010000038.1 <> na Primary Assembly 2419473 na Scaffold_79 unplaced-scaffold na na JBTBFC010000041.1 <> na Primary Assembly 2171541 na Scaffold_66 unplaced-scaffold na na JBTBFC010000042.1 <> na Primary Assembly 2084593 na Scaffold_61 unplaced-scaffold na na JBTBFC010000043.1 <> na Primary Assembly 2081914 na Scaffold_80 unplaced-scaffold na na JBTBFC010000044.1 <> na Primary Assembly 2069054 na Scaffold_82 unplaced-scaffold na na JBTBFC010000045.1 <> na Primary Assembly 1997607 na Scaffold_55 unplaced-scaffold na na JBTBFC010000046.1 <> na Primary Assembly 1985254 na Scaffold_85 unplaced-scaffold na na JBTBFC010000047.1 <> na Primary Assembly 1745507 na Scaffold_87 unplaced-scaffold na na JBTBFC010000048.1 <> na Primary Assembly 1676654 na Scaffold_89 unplaced-scaffold na na JBTBFC010000049.1 <> na Primary Assembly 1612013 na Scaffold_54 unplaced-scaffold na na JBTBFC010000051.1 <> na Primary Assembly 1330409 na Scaffold_96 unplaced-scaffold na na JBTBFC010000052.1 <> na Primary Assembly 1293181 na Scaffold_98 unplaced-scaffold na na JBTBFC010000053.1 <> na Primary Assembly 1269989 na Scaffold_100 unplaced-scaffold na na JBTBFC010000054.1 <> na Primary Assembly 1212955 na Scaffold_101 unplaced-scaffold na na JBTBFC010000055.1 <> na Primary Assembly 1125824 na Scaffold_102 unplaced-scaffold na na JBTBFC010000056.1 <> na Primary Assembly 1085017 na Scaffold_103 unplaced-scaffold na na JBTBFC010000059.1 <> na Primary Assembly 983517 na Scaffold_106 unplaced-scaffold na na JBTBFC010000060.1 <> na Primary Assembly 968861 na Scaffold_108 unplaced-scaffold na na JBTBFC010000063.1 <> na Primary Assembly 904625 na Scaffold_109 unplaced-scaffold na na JBTBFC010000065.1 <> na Primary Assembly 874567 na Scaffold_113 unplaced-scaffold na na JBTBFC010000069.1 <> na Primary Assembly 762948 na Scaffold_114 unplaced-scaffold na na JBTBFC010000070.1 <> na Primary Assembly 756884 na Scaffold_115 unplaced-scaffold na na JBTBFC010000071.1 <> na Primary Assembly 699389 na Scaffold_117 unplaced-scaffold na na JBTBFC010000072.1 <> na Primary Assembly 643307 na Scaffold_125 unplaced-scaffold na na JBTBFC010000075.1 <> na Primary Assembly 552892 na Scaffold_126 unplaced-scaffold na na JBTBFC010000076.1 <> na Primary Assembly 537275 na Scaffold_130 unplaced-scaffold na na JBTBFC010000077.1 <> na Primary Assembly 503281 na Scaffold_131 unplaced-scaffold na na JBTBFC010000078.1 <> na Primary Assembly 495681 na Scaffold_135 unplaced-scaffold na na JBTBFC010000079.1 <> na Primary Assembly 438488 na Scaffold_137 unplaced-scaffold na na JBTBFC010000080.1 <> na Primary Assembly 426191 na Scaffold_138 unplaced-scaffold na na JBTBFC010000081.1 <> na Primary Assembly 418045 na Scaffold_139 unplaced-scaffold na na JBTBFC010000082.1 <> na Primary Assembly 410416 na Scaffold_140 unplaced-scaffold na na JBTBFC010000083.1 <> na Primary Assembly 407861 na Scaffold_142 unplaced-scaffold na na JBTBFC010000084.1 <> na Primary Assembly 389512 na Scaffold_148 unplaced-scaffold na na JBTBFC010000085.1 <> na Primary Assembly 364387 na Scaffold_151 unplaced-scaffold na na JBTBFC010000087.1 <> na Primary Assembly 319486 na Scaffold_152 unplaced-scaffold na na JBTBFC010000089.1 <> na Primary Assembly 312282 na Scaffold_155 unplaced-scaffold na na JBTBFC010000090.1 <> na Primary Assembly 303116 na Scaffold_156 unplaced-scaffold na na JBTBFC010000091.1 <> na Primary Assembly 300376 na Scaffold_158 unplaced-scaffold na na JBTBFC010000092.1 <> na Primary Assembly 292901 na Scaffold_159 unplaced-scaffold na na JBTBFC010000093.1 <> na Primary Assembly 292620 na Scaffold_160 unplaced-scaffold na na JBTBFC010000094.1 <> na Primary Assembly 283356 na Scaffold_161 unplaced-scaffold na na JBTBFC010000095.1 <> na Primary Assembly 281452 na Scaffold_163 unplaced-scaffold na na JBTBFC010000096.1 <> na Primary Assembly 276871 na Scaffold_164 unplaced-scaffold na na JBTBFC010000097.1 <> na Primary Assembly 271916 na Scaffold_51 unplaced-scaffold na na JBTBFC010000098.1 <> na Primary Assembly 270746 na Scaffold_166 unplaced-scaffold na na JBTBFC010000099.1 <> na Primary Assembly 259501 na Scaffold_169 unplaced-scaffold na na JBTBFC010000100.1 <> na Primary Assembly 244074 na Scaffold_170 unplaced-scaffold na na JBTBFC010000101.1 <> na Primary Assembly 231939 na Scaffold_172 unplaced-scaffold na na JBTBFC010000102.1 <> na Primary Assembly 226582 na Scaffold_173 unplaced-scaffold na na JBTBFC010000103.1 <> na Primary Assembly 223339 na Scaffold_182 unplaced-scaffold na na JBTBFC010000104.1 <> na Primary Assembly 198207 na Scaffold_184 unplaced-scaffold na na JBTBFC010000105.1 <> na Primary Assembly 192602 na Scaffold_185 unplaced-scaffold na na JBTBFC010000106.1 <> na Primary Assembly 189815 na Scaffold_186 unplaced-scaffold na na JBTBFC010000107.1 <> na Primary Assembly 189389 na Scaffold_188 unplaced-scaffold na na JBTBFC010000108.1 <> na Primary Assembly 185874 na Scaffold_195 unplaced-scaffold na na JBTBFC010000110.1 <> na Primary Assembly 173815 na Scaffold_196 unplaced-scaffold na na JBTBFC010000111.1 <> na Primary Assembly 173500 na Scaffold_200 unplaced-scaffold na na JBTBFC010000112.1 <> na Primary Assembly 165898 na Scaffold_204 unplaced-scaffold na na JBTBFC010000113.1 <> na Primary Assembly 158448 na Scaffold_205 unplaced-scaffold na na JBTBFC010000114.1 <> na Primary Assembly 158210 na Scaffold_207 unplaced-scaffold na na JBTBFC010000115.1 <> na Primary Assembly 151485 na Scaffold_209 unplaced-scaffold na na JBTBFC010000117.1 <> na Primary Assembly 143473 na Scaffold_213 unplaced-scaffold na na JBTBFC010000118.1 <> na Primary Assembly 132214 na Scaffold_216 unplaced-scaffold na na JBTBFC010000119.1 <> na Primary Assembly 130951 na Scaffold_219 unplaced-scaffold na na JBTBFC010000120.1 <> na Primary Assembly 127626 na Scaffold_220 unplaced-scaffold na na JBTBFC010000121.1 <> na Primary Assembly 126749 na Scaffold_225 unplaced-scaffold na na JBTBFC010000122.1 <> na Primary Assembly 121468 na Scaffold_226 unplaced-scaffold na na JBTBFC010000123.1 <> na Primary Assembly 120702 na Scaffold_227 unplaced-scaffold na na JBTBFC010000124.1 <> na Primary Assembly 120151 na Scaffold_228 unplaced-scaffold na na JBTBFC010000125.1 <> na Primary Assembly 119252 na Scaffold_229 unplaced-scaffold na na JBTBFC010000126.1 <> na Primary Assembly 116608 na Scaffold_232 unplaced-scaffold na na JBTBFC010000127.1 <> na Primary Assembly 112526 na Scaffold_237 unplaced-scaffold na na JBTBFC010000128.1 <> na Primary Assembly 107877 na Scaffold_239 unplaced-scaffold na na JBTBFC010000129.1 <> na Primary Assembly 105992 na Scaffold_241 unplaced-scaffold na na JBTBFC010000130.1 <> na Primary Assembly 104788 na Scaffold_917 unplaced-scaffold na na JBTBFC010000131.1 <> na Primary Assembly 103423 na Scaffold_245 unplaced-scaffold na na JBTBFC010000132.1 <> na Primary Assembly 100811 na Scaffold_247 unplaced-scaffold na na JBTBFC010000133.1 <> na Primary Assembly 97272 na Scaffold_920 unplaced-scaffold na na JBTBFC010000134.1 <> na Primary Assembly 96943 na Scaffold_255 unplaced-scaffold na na JBTBFC010000135.1 <> na Primary Assembly 90494 na Scaffold_257 unplaced-scaffold na na JBTBFC010000136.1 <> na Primary Assembly 89484 na Scaffold_258 unplaced-scaffold na na JBTBFC010000137.1 <> na Primary Assembly 89296 na Scaffold_924 unplaced-scaffold na na JBTBFC010000138.1 <> na Primary Assembly 85552 na Scaffold_264 unplaced-scaffold na na JBTBFC010000139.1 <> na Primary Assembly 80941 na Scaffold_926 unplaced-scaffold na na JBTBFC010000140.1 <> na Primary Assembly 76146 na Scaffold_269 unplaced-scaffold na na JBTBFC010000141.1 <> na Primary Assembly 74770 na Scaffold_928 unplaced-scaffold na na JBTBFC010000142.1 <> na Primary Assembly 73920 na Scaffold_273 unplaced-scaffold na na JBTBFC010000143.1 <> na Primary Assembly 72609 na Scaffold_930 unplaced-scaffold na na JBTBFC010000144.1 <> na Primary Assembly 72055 na Scaffold_274 unplaced-scaffold na na JBTBFC010000145.1 <> na Primary Assembly 72019 na Scaffold_932 unplaced-scaffold na na JBTBFC010000146.1 <> na Primary Assembly 71151 na Scaffold_275 unplaced-scaffold na na JBTBFC010000147.1 <> na Primary Assembly 70586 na Scaffold_277 unplaced-scaffold na na JBTBFC010000148.1 <> na Primary Assembly 69496 na Scaffold_935 unplaced-scaffold na na JBTBFC010000149.1 <> na Primary Assembly 69082 na Scaffold_280 unplaced-scaffold na na JBTBFC010000150.1 <> na Primary Assembly 69079 na Scaffold_281 unplaced-scaffold na na JBTBFC010000151.1 <> na Primary Assembly 68786 na Scaffold_938 unplaced-scaffold na na JBTBFC010000152.1 <> na Primary Assembly 67786 na Scaffold_282 unplaced-scaffold na na JBTBFC010000153.1 <> na Primary Assembly 67685 na Scaffold_940 unplaced-scaffold na na JBTBFC010000154.1 <> na Primary Assembly 67663 na Scaffold_284 unplaced-scaffold na na JBTBFC010000155.1 <> na Primary Assembly 66070 na Scaffold_942 unplaced-scaffold na na JBTBFC010000156.1 <> na Primary Assembly 65884 na Scaffold_286 unplaced-scaffold na na JBTBFC010000157.1 <> na Primary Assembly 64903 na Scaffold_287 unplaced-scaffold na na JBTBFC010000158.1 <> na Primary Assembly 64589 na Scaffold_291 unplaced-scaffold na na JBTBFC010000159.1 <> na Primary Assembly 62898 na Scaffold_292 unplaced-scaffold na na JBTBFC010000160.1 <> na Primary Assembly 62724 na Scaffold_948 unplaced-scaffold na na JBTBFC010000162.1 <> na Primary Assembly 62343 na Scaffold_949 unplaced-scaffold na na JBTBFC010000163.1 <> na Primary Assembly 62170 na Scaffold_950 unplaced-scaffold na na JBTBFC010000164.1 <> na Primary Assembly 61766 na Scaffold_951 unplaced-scaffold na na JBTBFC010000165.1 <> na Primary Assembly 60567 na Scaffold_952 unplaced-scaffold na na JBTBFC010000166.1 <> na Primary Assembly 59917 na Scaffold_300 unplaced-scaffold na na JBTBFC010000167.1 <> na Primary Assembly 58360 na Scaffold_301 unplaced-scaffold na na JBTBFC010000168.1 <> na Primary Assembly 57877 na Scaffold_955 unplaced-scaffold na na JBTBFC010000169.1 <> na Primary Assembly 55856 na Scaffold_956 unplaced-scaffold na na JBTBFC010000170.1 <> na Primary Assembly 55218 na Scaffold_312 unplaced-scaffold na na JBTBFC010000171.1 <> na Primary Assembly 53415 na Scaffold_958 unplaced-scaffold na na JBTBFC010000172.1 <> na Primary Assembly 52418 na Scaffold_959 unplaced-scaffold na na JBTBFC010000173.1 <> na Primary Assembly 52107 na Scaffold_320 unplaced-scaffold na na JBTBFC010000174.1 <> na Primary Assembly 49953 na Scaffold_322 unplaced-scaffold na na JBTBFC010000175.1 <> na Primary Assembly 49201 na Scaffold_962 unplaced-scaffold na na JBTBFC010000176.1 <> na Primary Assembly 48700 na Scaffold_963 unplaced-scaffold na na JBTBFC010000177.1 <> na Primary Assembly 47627 na Scaffold_964 unplaced-scaffold na na JBTBFC010000178.1 <> na Primary Assembly 46932 na Scaffold_328 unplaced-scaffold na na JBTBFC010000179.1 <> na Primary Assembly 46699 na Scaffold_966 unplaced-scaffold na na JBTBFC010000180.1 <> na Primary Assembly 45407 na Scaffold_967 unplaced-scaffold na na JBTBFC010000181.1 <> na Primary Assembly 44834 na Scaffold_332 unplaced-scaffold na na JBTBFC010000182.1 <> na Primary Assembly 44246 na Scaffold_969 unplaced-scaffold na na JBTBFC010000183.1 <> na Primary Assembly 42816 na Scaffold_970 unplaced-scaffold na na JBTBFC010000184.1 <> na Primary Assembly 38869 na Scaffold_344 unplaced-scaffold na na JBTBFC010000185.1 <> na Primary Assembly 37476 na Scaffold_972 unplaced-scaffold na na JBTBFC010000186.1 <> na Primary Assembly 37349 na Scaffold_345 unplaced-scaffold na na JBTBFC010000187.1 <> na Primary Assembly 37175 na Scaffold_974 unplaced-scaffold na na JBTBFC010000188.1 <> na Primary Assembly 35426 na Scaffold_975 unplaced-scaffold na na JBTBFC010000189.1 <> na Primary Assembly 34825 na Scaffold_349 unplaced-scaffold na na JBTBFC010000190.1 <> na Primary Assembly 34330 na Scaffold_977 unplaced-scaffold na na JBTBFC010000191.1 <> na Primary Assembly 33453 na Scaffold_978 unplaced-scaffold na na JBTBFC010000192.1 <> na Primary Assembly 31795 na Scaffold_352 unplaced-scaffold na na JBTBFC010000193.1 <> na Primary Assembly 31472 na Scaffold_980 unplaced-scaffold na na JBTBFC010000194.1 <> na Primary Assembly 30252 na Scaffold_981 unplaced-scaffold na na JBTBFC010000195.1 <> na Primary Assembly 29356 na Scaffold_982 unplaced-scaffold na na JBTBFC010000196.1 <> na Primary Assembly 28091 na