# Assembly name: fMyoSco1.hap1 # Organism name: Myoxocephalus scorpius (shorthorn sculpin) # Isolate: fMyoSco1 # Sex: male # Taxid: 8097 # BioSample: SAMN53316991 # BioProject: PRJNA1369119 # Submitter: Vertebrate Genomes Project # Date: 2026-01-23 # Assembly type: haploid (haplotype 1) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JBTXHC01 # Assembly method: Hifiasm + Hi-C phasing v. 0.19.3 + galaxy0; purge_dups v. 2.2; yahs v. 1.2a.2 + galaxy1 # Expected final version: No # Genome coverage: 60.14x # Sequencing technology: PacBio Sequel II HiFi; Arima Hi-C v2 # GenBank assembly accession: GCA_054668685.1 # Linked assembly: GCA_054668615.1 (haplotype 2) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_054668705.1 Primary Assembly ## GCA_054668715.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name SUPER_1 assembled-molecule 1 Chromosome CM138725.1 <> na Primary Assembly 57335687 na SUPER_2 assembled-molecule 2 Chromosome CM138726.1 <> na Primary Assembly 56670893 na SUPER_3 assembled-molecule 3 Chromosome CM138727.1 <> na Primary Assembly 55017562 na SUPER_4 assembled-molecule 4 Chromosome CM138728.1 <> na Primary Assembly 54655007 na SUPER_5 assembled-molecule 5 Chromosome CM138729.1 <> na Primary Assembly 53230495 na SUPER_6 assembled-molecule 6 Chromosome CM138730.1 <> na Primary Assembly 39160199 na SUPER_7 assembled-molecule 7 Chromosome CM138731.1 <> na Primary Assembly 37566308 na SUPER_8 assembled-molecule 8 Chromosome CM138732.1 <> na Primary Assembly 37154042 na SUPER_9 assembled-molecule 9 Chromosome CM138733.1 <> na Primary Assembly 36611539 na SUPER_10 assembled-molecule 10 Chromosome CM138734.1 <> na Primary Assembly 35681695 na SUPER_11 assembled-molecule 11 Chromosome CM138735.1 <> na Primary Assembly 34112001 na SUPER_12 assembled-molecule 12 Chromosome CM138736.1 <> na Primary Assembly 33700841 na SUPER_13 assembled-molecule 13 Chromosome CM138737.1 <> na Primary Assembly 32473735 na SUPER_14 assembled-molecule 14 Chromosome CM138738.1 <> na Primary Assembly 32090878 na SUPER_15 assembled-molecule 15 Chromosome CM138739.1 <> na Primary Assembly 30413378 na SUPER_16 assembled-molecule 16 Chromosome CM138740.1 <> na Primary Assembly 27489193 na SUPER_17 assembled-molecule 17 Chromosome CM138741.1 <> na Primary Assembly 27361234 na SUPER_18 assembled-molecule 18 Chromosome CM138742.1 <> na Primary Assembly 22467678 na SUPER_19 assembled-molecule 19 Chromosome CM138743.1 <> na Primary Assembly 21657429 na SUPER_12_unloc_1 unlocalized-scaffold 12 Chromosome JBTXHC010000014.1 <> na Primary Assembly 226272 na SUPER_18_unloc_1 unlocalized-scaffold 18 Chromosome JBTXHC010000021.1 <> na Primary Assembly 77054 na Scaffold_57 unplaced-scaffold na na JBTXHC010000023.1 <> na Primary Assembly 75956 na Scaffold_58 unplaced-scaffold na na JBTXHC010000024.1 <> na Primary Assembly 75853 na Scaffold_59 unplaced-scaffold na na JBTXHC010000025.1 <> na Primary Assembly 70058 na Scaffold_64 unplaced-scaffold na na JBTXHC010000026.1 <> na Primary Assembly 57148 na Scaffold_65 unplaced-scaffold na na JBTXHC010000027.1 <> na Primary Assembly 56961 na Scaffold_67 unplaced-scaffold na na JBTXHC010000028.1 <> na Primary Assembly 55025 na Scaffold_68 unplaced-scaffold na na JBTXHC010000029.1 <> na Primary Assembly 53699 na Scaffold_71 unplaced-scaffold na na JBTXHC010000030.1 <> na Primary Assembly 40891 na Scaffold_72 unplaced-scaffold na na JBTXHC010000031.1 <> na Primary Assembly 40712 na Scaffold_73 unplaced-scaffold na na JBTXHC010000032.1 <> na Primary Assembly 40383 na Scaffold_74 unplaced-scaffold na na JBTXHC010000033.1 <> na Primary Assembly 39750 na Scaffold_76 unplaced-scaffold na na JBTXHC010000034.1 <> na Primary Assembly 37746 na Scaffold_77 unplaced-scaffold na na JBTXHC010000035.1 <> na Primary Assembly 36739 na Scaffold_78 unplaced-scaffold na na JBTXHC010000036.1 <> na Primary Assembly 36413 na Scaffold_79 unplaced-scaffold na na JBTXHC010000037.1 <> na Primary Assembly 35922 na Scaffold_80 unplaced-scaffold na na JBTXHC010000038.1 <> na Primary Assembly 34927 na Scaffold_81 unplaced-scaffold na na JBTXHC010000039.1 <> na Primary Assembly 34569 na Scaffold_82 unplaced-scaffold na na JBTXHC010000040.1 <> na Primary Assembly 33998 na Scaffold_83 unplaced-scaffold na na JBTXHC010000041.1 <> na Primary Assembly 33659 na Scaffold_84 unplaced-scaffold na na JBTXHC010000042.1 <> na Primary Assembly 33387 na Scaffold_85 unplaced-scaffold na na JBTXHC010000043.1 <> na Primary Assembly 32830 na Scaffold_86 unplaced-scaffold na na JBTXHC010000044.1 <> na Primary Assembly 32317 na Scaffold_88 unplaced-scaffold na na JBTXHC010000045.1 <> na Primary Assembly 31777 na Scaffold_91 unplaced-scaffold na na JBTXHC010000046.1 <> na Primary Assembly 30228 na Scaffold_92 unplaced-scaffold na na JBTXHC010000047.1 <> na Primary Assembly 26506 na Scaffold_93 unplaced-scaffold na na JBTXHC010000048.1 <> na Primary Assembly 23522 na Scaffold_94 unplaced-scaffold na na JBTXHC010000049.1 <> na Primary Assembly 23335 na Scaffold_95 unplaced-scaffold na na JBTXHC010000050.1 <> na Primary Assembly 22888 na Scaffold_96 unplaced-scaffold na na JBTXHC010000051.1 <> na Primary Assembly 19552 na Scaffold_97 unplaced-scaffold na na JBTXHC010000052.1 <> na Primary Assembly 18396 na Scaffold_98 unplaced-scaffold na na JBTXHC010000053.1 <> na Primary Assembly 17144 na ptg000001l_rc_rotated assembled-molecule MT Mitochondrion CM138744.1 <> na non-nuclear 16683 na