# Assembly name: mLesInc1.hap1 # Organism name: Lestoros inca (Incan shrew opossum) # Isolate: mLesInc1 # Sex: male # Taxid: 42731 # BioSample: SAMN51985648 # BioProject: PRJNA1335355 # Submitter: Vertebrate Genomes Project # Date: 2026-01-22 # Assembly type: haploid (haplotype 1) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JBTMPH01 # Assembly method: Hifiasm + Hi-C phasing v. 0.25.0 + galaxy0; yahs v. 1.2a.2 + galaxy2 # Expected final version: No # Genome coverage: 51.17x # Sequencing technology: PacBio Revio HiFi; Arima Hi-C v2 # RefSeq category: Reference Genome # GenBank assembly accession: GCA_054644205.1 # Linked assembly: GCA_054644215.1 (haplotype 2) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_054644275.1 Primary Assembly ## GCA_054644285.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name SUPER_1 assembled-molecule 1 Chromosome CM138377.1 <> na Primary Assembly 972627299 na SUPER_2 assembled-molecule 2 Chromosome CM138378.1 <> na Primary Assembly 874224821 na SUPER_3 assembled-molecule 3 Chromosome CM138379.1 <> na Primary Assembly 853182845 na SUPER_4 assembled-molecule 4 Chromosome CM138380.1 <> na Primary Assembly 635672198 na SUPER_5 assembled-molecule 5 Chromosome CM138381.1 <> na Primary Assembly 385359534 na SUPER_6 assembled-molecule 6 Chromosome CM138382.1 <> na Primary Assembly 375438676 na SUPER_X assembled-molecule X Chromosome CM138383.1 <> na Primary Assembly 121567840 na SUPER_Y assembled-molecule Y Chromosome CM138384.1 <> na Primary Assembly 18703836 na SUPER_3_unloc_1 unlocalized-scaffold 3 Chromosome JBTMPH010000011.1 <> na Primary Assembly 1399746 na SUPER_3_unloc_2 unlocalized-scaffold 3 Chromosome JBTMPH010000018.1 <> na Primary Assembly 421973 na SUPER_3_unloc_3 unlocalized-scaffold 3 Chromosome JBTMPH010000020.1 <> na Primary Assembly 402857 na SUPER_4_unloc_1 unlocalized-scaffold 4 Chromosome JBTMPH010000016.1 <> na Primary Assembly 514702 na SUPER_X_unloc_1 unlocalized-scaffold X Chromosome JBTMPH010000013.1 <> na Primary Assembly 786966 na SUPER_Y_unloc_1 unlocalized-scaffold Y Chromosome JBTMPH010000014.1 <> na Primary Assembly 601436 na Scaffold_15 unplaced-scaffold na na JBTMPH010000010.1 <> na Primary Assembly 1576902 na Scaffold_23 unplaced-scaffold na na JBTMPH010000012.1 <> na Primary Assembly 999533 na Scaffold_18 unplaced-scaffold na na JBTMPH010000015.1 <> na Primary Assembly 541184 na Scaffold_20 unplaced-scaffold na na JBTMPH010000017.1 <> na Primary Assembly 493369 na Scaffold_27 unplaced-scaffold na na JBTMPH010000019.1 <> na Primary Assembly 407257 na Scaffold_21 unplaced-scaffold na na JBTMPH010000021.1 <> na Primary Assembly 368088 na Scaffold_29 unplaced-scaffold na na JBTMPH010000022.1 <> na Primary Assembly 361301 na Scaffold_30 unplaced-scaffold na na JBTMPH010000023.1 <> na Primary Assembly 350012 na Scaffold_31 unplaced-scaffold na na JBTMPH010000024.1 <> na Primary Assembly 344757 na Scaffold_32 unplaced-scaffold na na JBTMPH010000025.1 <> na Primary Assembly 337174 na Scaffold_34 unplaced-scaffold na na JBTMPH010000026.1 <> na Primary Assembly 335785 na Scaffold_36 unplaced-scaffold na na JBTMPH010000027.1 <> na Primary Assembly 324621 na Scaffold_39 unplaced-scaffold na na JBTMPH010000028.1 <> na Primary Assembly 297964 na Scaffold_40 unplaced-scaffold na na JBTMPH010000029.1 <> na Primary Assembly 286793 na Scaffold_41 unplaced-scaffold na na JBTMPH010000030.1 <> na Primary Assembly 281640 na Scaffold_42 unplaced-scaffold na na JBTMPH010000031.1 <> na Primary Assembly 278554 na Scaffold_44 unplaced-scaffold na na JBTMPH010000032.1 <> na Primary Assembly 265664 na Scaffold_45 unplaced-scaffold na na JBTMPH010000033.1 <> na Primary Assembly 259759 na Scaffold_46 unplaced-scaffold na na JBTMPH010000034.1 <> na Primary Assembly 248541 na Scaffold_47 unplaced-scaffold na na JBTMPH010000035.1 <> na Primary Assembly 246578 na Scaffold_50 unplaced-scaffold na na JBTMPH010000036.1 <> na Primary Assembly 226330 na Scaffold_219 unplaced-scaffold na na JBTMPH010000037.1 <> na Primary Assembly 220375 na Scaffold_52 unplaced-scaffold na na JBTMPH010000038.1 <> na Primary Assembly 218953 na Scaffold_53 unplaced-scaffold na na JBTMPH010000039.1 <> na Primary Assembly 216734 na Scaffold_55 unplaced-scaffold na na JBTMPH010000040.1 <> na Primary Assembly 209094 na Scaffold_58 unplaced-scaffold na na JBTMPH010000041.1 <> na Primary Assembly 189004 na Scaffold_224 unplaced-scaffold na na JBTMPH010000042.1 <> na Primary Assembly 181057 na Scaffold_60 unplaced-scaffold na na JBTMPH010000043.1 <> na Primary Assembly 180549 na Scaffold_61 unplaced-scaffold na na JBTMPH010000044.1 <> na Primary Assembly 179534 na Scaffold_62 unplaced-scaffold na na JBTMPH010000045.1 <> na Primary Assembly 175794 na Scaffold_242 unplaced-scaffold na na JBTMPH010000046.1 <> na Primary Assembly 172441 na Scaffold_63 unplaced-scaffold na na JBTMPH010000047.1 <> na Primary Assembly 170142 na Scaffold_64 unplaced-scaffold na na JBTMPH010000048.1 <> na Primary Assembly 169879 na Scaffold_287 unplaced-scaffold na na JBTMPH010000049.1 <> na Primary Assembly 167834 na Scaffold_67 unplaced-scaffold na na JBTMPH010000050.1 <> na Primary Assembly 152307 na Scaffold_289 unplaced-scaffold na na JBTMPH010000051.1 <> na Primary Assembly 137934 na Scaffold_68 unplaced-scaffold na na JBTMPH010000052.1 <> na Primary Assembly 134605 na Scaffold_69 unplaced-scaffold na na JBTMPH010000053.1 <> na Primary Assembly 134230 na Scaffold_292 unplaced-scaffold na na JBTMPH010000054.1 <> na Primary Assembly 133154 na Scaffold_72 unplaced-scaffold na na JBTMPH010000055.1 <> na Primary Assembly 118017 na Scaffold_294 unplaced-scaffold na na JBTMPH010000056.1 <> na Primary Assembly 114212 na Scaffold_73 unplaced-scaffold na na JBTMPH010000057.1 <> na Primary Assembly 113746 na Scaffold_296 unplaced-scaffold na na JBTMPH010000058.1 <> na Primary Assembly 112589 na Scaffold_74 unplaced-scaffold na na JBTMPH010000059.1 <> na Primary Assembly 112179 na Scaffold_284 unplaced-scaffold na na JBTMPH010000060.1 <> na Primary Assembly 108526 na Scaffold_75 unplaced-scaffold na na JBTMPH010000061.1 <> na Primary Assembly 107648 na Scaffold_300 unplaced-scaffold na na JBTMPH010000062.1 <> na Primary Assembly 105776 na Scaffold_301 unplaced-scaffold na na JBTMPH010000063.1 <> na Primary Assembly 102632 na Scaffold_302 unplaced-scaffold na na JBTMPH010000064.1 <> na Primary Assembly 101961 na Scaffold_77 unplaced-scaffold na na JBTMPH010000065.1 <> na Primary Assembly 99393 na Scaffold_304 unplaced-scaffold na na JBTMPH010000066.1 <> na Primary Assembly 95937 na Scaffold_305 unplaced-scaffold na na JBTMPH010000067.1 <> na Primary Assembly 94189 na Scaffold_306 unplaced-scaffold na na JBTMPH010000068.1 <> na Primary Assembly 86929 na Scaffold_81 unplaced-scaffold na na JBTMPH010000069.1 <> na Primary Assembly 86667 na Scaffold_308 unplaced-scaffold na na JBTMPH010000070.1 <> na Primary Assembly 85483 na Scaffold_309 unplaced-scaffold na na JBTMPH010000071.1 <> na Primary Assembly 83963 na Scaffold_83 unplaced-scaffold na na JBTMPH010000072.1 <> na Primary Assembly 80407 na Scaffold_270 unplaced-scaffold na na JBTMPH010000073.1 <> na Primary Assembly 77520 na Scaffold_85 unplaced-scaffold na na JBTMPH010000074.1 <> na Primary Assembly 75059 na Scaffold_258 unplaced-scaffold na na JBTMPH010000075.1 <> na Primary Assembly 73505 na Scaffold_259 unplaced-scaffold na na JBTMPH010000076.1 <> na Primary Assembly 72423 na Scaffold_86 unplaced-scaffold na na JBTMPH010000077.1 <> na Primary Assembly 71368 na Scaffold_261 unplaced-scaffold na na JBTMPH010000078.1 <> na Primary Assembly 70585 na Scaffold_87 unplaced-scaffold na na JBTMPH010000079.1 <> na Primary Assembly 69320 na Scaffold_263 unplaced-scaffold na na JBTMPH010000080.1 <> na Primary Assembly 64813 na Scaffold_88 unplaced-scaffold na na JBTMPH010000081.1 <> na Primary Assembly 63563 na Scaffold_265 unplaced-scaffold na na JBTMPH010000082.1 <> na Primary Assembly 62898 na Scaffold_266 unplaced-scaffold na na JBTMPH010000083.1 <> na Primary Assembly 62596 na Scaffold_267 unplaced-scaffold na na JBTMPH010000084.1 <> na Primary Assembly 61353 na Scaffold_268 unplaced-scaffold na na JBTMPH010000085.1 <> na Primary Assembly 58187 na Scaffold_90 unplaced-scaffold na na JBTMPH010000086.1 <> na Primary Assembly 56674 na Scaffold_256 unplaced-scaffold na na JBTMPH010000087.1 <> na Primary Assembly 52287 na Scaffold_271 unplaced-scaffold na na JBTMPH010000088.1 <> na Primary Assembly 52169 na Scaffold_92 unplaced-scaffold na na JBTMPH010000089.1 <> na Primary Assembly 50442 na Scaffold_273 unplaced-scaffold na na JBTMPH010000090.1 <> na Primary Assembly 48470 na Scaffold_274 unplaced-scaffold na na JBTMPH010000091.1 <> na Primary Assembly 47955 na Scaffold_275 unplaced-scaffold na na JBTMPH010000092.1 <> na Primary Assembly 47522 na Scaffold_276 unplaced-scaffold na na JBTMPH010000093.1 <> na Primary Assembly 47298 na Scaffold_277 unplaced-scaffold na na JBTMPH010000094.1 <> na Primary Assembly 46113 na Scaffold_278 unplaced-scaffold na na JBTMPH010000095.1 <> na Primary Assembly 45478 na Scaffold_279 unplaced-scaffold na na JBTMPH010000096.1 <> na Primary Assembly 44698 na Scaffold_95 unplaced-scaffold na na JBTMPH010000097.1 <> na Primary Assembly 44663 na Scaffold_281 unplaced-scaffold na na JBTMPH010000098.1 <> na Primary Assembly 43613 na Scaffold_282 unplaced-scaffold na na JBTMPH010000099.1 <> na Primary Assembly 42555 na Scaffold_96 unplaced-scaffold na na JBTMPH010000100.1 <> na Primary Assembly 42421 na Scaffold_192 unplaced-scaffold na na JBTMPH010000101.1 <> na Primary Assembly 42257 na Scaffold_137 unplaced-scaffold na na JBTMPH010000102.1 <> na Primary Assembly 41595 na Scaffold_139 unplaced-scaffold na na JBTMPH010000103.1 <> na Primary Assembly 41304 na Scaffold_97 unplaced-scaffold na na JBTMPH010000104.1 <> na Primary Assembly 40252 na Scaffold_141 unplaced-scaffold na na JBTMPH010000105.1 <> na Primary Assembly 39884 na Scaffold_142 unplaced-scaffold na na JBTMPH010000106.1 <> na Primary Assembly 39554 na Scaffold_143 unplaced-scaffold na na JBTMPH010000107.1 <> na Primary Assembly 38199 na Scaffold_98 unplaced-scaffold na na JBTMPH010000108.1 <> na Primary Assembly 38118 na Scaffold_145 unplaced-scaffold na na JBTMPH010000109.1 <> na Primary Assembly 37752 na Scaffold_146 unplaced-scaffold na na JBTMPH010000110.1 <> na Primary Assembly 36961 na Scaffold_147 unplaced-scaffold na na JBTMPH010000111.1 <> na Primary Assembly 36591 na Scaffold_148 unplaced-scaffold na na JBTMPH010000112.1 <> na Primary Assembly 36434 na Scaffold_136 unplaced-scaffold na na JBTMPH010000113.1 <> na Primary Assembly 36007 na Scaffold_99 unplaced-scaffold na na JBTMPH010000114.1 <> na Primary Assembly 35812 na Scaffold_150 unplaced-scaffold na na JBTMPH010000115.1 <> na Primary Assembly 35162 na Scaffold_151 unplaced-scaffold na na JBTMPH010000116.1 <> na Primary Assembly 34574 na Scaffold_152 unplaced-scaffold na na JBTMPH010000117.1 <> na Primary Assembly 33865 na Scaffold_153 unplaced-scaffold na na JBTMPH010000118.1 <> na Primary Assembly 33765 na Scaffold_154 unplaced-scaffold na na JBTMPH010000119.1 <> na Primary Assembly 33744 na Scaffold_155 unplaced-scaffold na na JBTMPH010000120.1 <> na Primary Assembly 33358 na Scaffold_100 unplaced-scaffold na na JBTMPH010000121.1 <> na Primary Assembly 33307 na Scaffold_157 unplaced-scaffold na na JBTMPH010000122.1 <> na Primary Assembly 33250 na Scaffold_158 unplaced-scaffold na na JBTMPH010000123.1 <> na Primary Assembly 33036 na Scaffold_159 unplaced-scaffold na na JBTMPH010000124.1 <> na Primary Assembly 32944 na Scaffold_160 unplaced-scaffold na na JBTMPH010000125.1 <> na Primary Assembly 32135 na Scaffold_123 unplaced-scaffold na na JBTMPH010000126.1 <> na Primary Assembly 31726 na Scaffold_101 unplaced-scaffold na na JBTMPH010000127.1 <> na Primary Assembly 31715 na Scaffold_112 unplaced-scaffold na na JBTMPH010000128.1 <> na Primary Assembly 31714 na Scaffold_113 unplaced-scaffold na na JBTMPH010000129.1 <> na Primary Assembly 31450 na Scaffold_114 unplaced-scaffold na na JBTMPH010000130.1 <> na Primary Assembly 31268 na Scaffold_115 unplaced-scaffold na na JBTMPH010000131.1 <> na Primary Assembly 31017 na Scaffold_116 unplaced-scaffold na na JBTMPH010000132.1 <> na Primary Assembly 30367 na Scaffold_102 unplaced-scaffold na na JBTMPH010000133.1 <> na Primary Assembly 30279 na Scaffold_118 unplaced-scaffold na na JBTMPH010000134.1 <> na Primary Assembly 30243 na Scaffold_119 unplaced-scaffold na na JBTMPH010000135.1 <> na Primary Assembly 30161 na Scaffold_120 unplaced-scaffold na na JBTMPH010000136.1 <> na Primary Assembly 30151 na Scaffold_121 unplaced-scaffold na na JBTMPH010000137.1 <> na Primary Assembly 29906 na Scaffold_122 unplaced-scaffold na na JBTMPH010000138.1 <> na Primary Assembly 29760 na Scaffold_110 unplaced-scaffold na na JBTMPH010000139.1 <> na Primary Assembly 29528 na Scaffold_124 unplaced-scaffold na na JBTMPH010000140.1 <> na Primary Assembly 29353 na Scaffold_103 unplaced-scaffold na na JBTMPH010000141.1 <> na Primary Assembly 29222 na Scaffold_126 unplaced-scaffold na na JBTMPH010000142.1 <> na Primary Assembly 29142 na Scaffold_127 unplaced-scaffold na na JBTMPH010000143.1 <> na Primary Assembly 28933 na Scaffold_128 unplaced-scaffold na na JBTMPH010000144.1 <> na Primary Assembly 28785 na Scaffold_129 unplaced-scaffold na na JBTMPH010000145.1 <> na Primary Assembly 28559 na Scaffold_130 unplaced-scaffold na na JBTMPH010000146.1 <> na Primary Assembly 28525 na Scaffold_131 unplaced-scaffold na na JBTMPH010000147.1 <> na Primary Assembly 28487 na Scaffold_104 unplaced-scaffold na na JBTMPH010000148.1 <> na Primary Assembly 28347 na Scaffold_133 unplaced-scaffold na na JBTMPH010000149.1 <> na Primary Assembly 28330 na Scaffold_135 unplaced-scaffold na na JBTMPH010000150.1 <> na Primary Assembly 27578 na Scaffold_179 unplaced-scaffold na na JBTMPH010000151.1 <> na Primary Assembly 27302 na Scaffold_180 unplaced-scaffold na na JBTMPH010000152.1 <> na Primary Assembly 27120 na Scaffold_181 unplaced-scaffold na na JBTMPH010000153.1 <> na Primary Assembly 27083 na Scaffold_182 unplaced-scaffold na na JBTMPH010000154.1 <> na Primary Assembly 26839 na Scaffold_105 unplaced-scaffold na na JBTMPH010000155.1 <> na Primary Assembly 26285 na Scaffold_184 unplaced-scaffold na na JBTMPH010000156.1 <> na Primary Assembly 26025 na Scaffold_185 unplaced-scaffold na na JBTMPH010000157.1 <> na Primary Assembly 25983 na Scaffold_186 unplaced-scaffold na na JBTMPH010000158.1 <> na Primary Assembly 25854 na Scaffold_187 unplaced-scaffold na na JBTMPH010000159.1 <> na Primary Assembly 25597 na Scaffold_188 unplaced-scaffold na na JBTMPH010000160.1 <> na Primary Assembly 25523 na Scaffold_189 unplaced-scaffold na na JBTMPH010000161.1 <> na Primary Assembly 25126 na Scaffold_190 unplaced-scaffold na na JBTMPH010000162.1 <> na Primary Assembly 24711 na Scaffold_106 unplaced-scaffold na na JBTMPH010000163.1 <> na Primary Assembly 24559 na Scaffold_178 unplaced-scaffold na na JBTMPH010000164.1 <> na Primary Assembly 24443 na Scaffold_193 unplaced-scaffold na na JBTMPH010000165.1 <> na Primary Assembly 24151 na Scaffold_194 unplaced-scaffold na na JBTMPH010000166.1 <> na Primary Assembly 23973 na Scaffold_195 unplaced-scaffold na na JBTMPH010000167.1 <> na Primary Assembly 23853 na Scaffold_196 unplaced-scaffold na na JBTMPH010000168.1 <> na Primary Assembly 23789 na Scaffold_197 unplaced-scaffold na na JBTMPH010000169.1 <> na Primary Assembly 23251 na Scaffold_107 unplaced-scaffold na na JBTMPH010000170.1 <> na Primary Assembly 23047 na Scaffold_199 unplaced-scaffold na na JBTMPH010000171.1 <> na Primary Assembly 22712 na Scaffold_161 unplaced-scaffold na na JBTMPH010000172.1 <> na Primary Assembly 22469 na Scaffold_162 unplaced-scaffold na na JBTMPH010000173.1 <> na Primary Assembly 22409 na Scaffold_163 unplaced-scaffold na na JBTMPH010000174.1 <> na Primary Assembly 22223 na Scaffold_164 unplaced-scaffold na na JBTMPH010000175.1 <> na Primary Assembly 21153 na Scaffold_165 unplaced-scaffold na na JBTMPH010000176.1 <> na Primary Assembly 20935 na Scaffold_166 unplaced-scaffold na na JBTMPH010000177.1 <> na Primary Assembly 20754 na Scaffold_167 unplaced-scaffold na na JBTMPH010000178.1 <> na Primary Assembly 20570 na Scaffold_168 unplaced-scaffold na na JBTMPH010000179.1 <> na Primary Assembly 20213 na Scaffold_108 unplaced-scaffold na na JBTMPH010000180.1 <> na Primary Assembly 19652 na Scaffold_170 unplaced-scaffold na na JBTMPH010000181.1 <> na Primary Assembly 19624 na Scaffold_171 unplaced-scaffold na na JBTMPH010000182.1 <> na Primary Assembly 18398 na Scaffold_172 unplaced-scaffold na na JBTMPH010000183.1 <> na Primary Assembly 18232 na Scaffold_173 unplaced-scaffold na na JBTMPH010000184.1 <> na Primary Assembly 18199 na Scaffold_174 unplaced-scaffold na na JBTMPH010000185.1 <> na Primary Assembly 17968 na Scaffold_175 unplaced-scaffold na na JBTMPH010000186.1 <> na Primary Assembly 16079 na Scaffold_176 unplaced-scaffold na na JBTMPH010000187.1 <> na Primary Assembly 14203 na Scaffold_109 unplaced-scaffold na na JBTMPH010000188.1 <> na Primary Assembly 8122 na ptg000014l_rotated assembled-molecule MT Mitochondrion CM138385.1 <> na non-nuclear 16699 na