# Assembly name: calJac240_pri # Organism name: Callithrix jacchus (white-tufted-ear marmoset) # Isolate: 240 # Sex: male # Taxid: 9483 # BioSample: SAMN47004743 # BioProject: PRJNA1229130 # Submitter: University of California Santa Cruz # Date: 2025-04-08 # Assembly type: haploid (principal pseudohaplotype of diploid) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JBLWJF01 # Assembly method: Verkko v. 2.2.1 # Expected final version: no # Genome coverage: 60x # Sequencing technology: Oxford Nanopore; PacBio RSII; Illumina NovaSeq # GenBank assembly accession: GCA_049354715.1 # Linked assembly: GCA_049354655.1 (alternate pseudohaplotype of diploid) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_049354725.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name pri_chr1 assembled-molecule 1 Chromosome CM111785.1 <> na Primary Assembly 220781134 na pri_chr2 assembled-molecule 2 Chromosome CM111786.1 <> na Primary Assembly 206717255 na pri_chr3 assembled-molecule 3 Chromosome CM111787.1 <> na Primary Assembly 193242953 na pri_chr4 assembled-molecule 4 Chromosome CM111788.1 <> na Primary Assembly 178191855 na pri_chr5 assembled-molecule 5 Chromosome CM111789.1 <> na Primary Assembly 167432195 na pri_chr6 assembled-molecule 6 Chromosome CM111790.1 <> na Primary Assembly 163750270 na pri_chr7 assembled-molecule 7 Chromosome CM111791.1 <> na Primary Assembly 160158162 na pri_chr8 assembled-molecule 8 Chromosome CM111792.1 <> na Primary Assembly 141933726 na pri_chr9 assembled-molecule 9 Chromosome CM111793.1 <> na Primary Assembly 137132494 na pri_chr10 assembled-molecule 10 Chromosome CM111794.1 <> na Primary Assembly 133459911 na pri_chr11 assembled-molecule 11 Chromosome CM111795.1 <> na Primary Assembly 129916798 na pri_chr12 assembled-molecule 12 Chromosome CM111796.1 <> na Primary Assembly 127981735 na pri_chr13 assembled-molecule 13 Chromosome CM111797.1 <> na Primary Assembly 124728607 na pri_chr14 assembled-molecule 14 Chromosome CM111798.1 <> na Primary Assembly 114986732 na pri_chr15 assembled-molecule 15 Chromosome CM111799.1 <> na Primary Assembly 104736960 na pri_chr16 assembled-molecule 16 Chromosome CM111800.1 <> na Primary Assembly 100665691 na pri_chr17 assembled-molecule 17 Chromosome CM111801.1 <> na Primary Assembly 83601742 na pri_chr18 assembled-molecule 18 Chromosome CM111802.1 <> na Primary Assembly 56798337 na pri_chr19 assembled-molecule 19 Chromosome CM111803.1 <> na Primary Assembly 57622253 na pri_chr20 assembled-molecule 20 Chromosome CM111804.1 <> na Primary Assembly 55874591 na pri_chr21 assembled-molecule 21 Chromosome CM111805.1 <> na Primary Assembly 54541873 na pri_chr22 assembled-molecule 22 Chromosome CM111806.1 <> na Primary Assembly 51666166 na pri_chrX assembled-molecule X Chromosome CM111807.1 <> na Primary Assembly 151627724 na pri_chrY assembled-molecule Y Chromosome CM111808.1 <> na Primary Assembly 15860301 na