# Assembly name: SpiSpi1_v1.hap2 # Organism name: Spinachia spinachia (sea stickleback) # Isolate: SK-2024b # Taxid: 206126 # BioSample: SAMN36735485 # BioProject: PRJNA1146009 # Submitter: University of Copenhagen # Date: 2025-02-27 # Assembly type: haploid (haplotype 2) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JBLUUD01 # Assembly method: Hifiasm v. 0.19; purge_dups v. 1.2.5; yahs v. 1.2a.1; samba v. 4.1.0 # Expected final version: yes # Genome coverage: 58x # Sequencing technology: HiFi; HiC # GenBank assembly accession: GCA_048127205.1 # Linked assembly: GCA_048126635.1 (haplotype 1) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_048127275.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name chr1 assembled-molecule 1 Chromosome CM106669.1 <> na Primary Assembly 35541588 na chr2 assembled-molecule 2 Chromosome CM106670.1 <> na Primary Assembly 30436358 na chr3 assembled-molecule 3 Chromosome CM106671.1 <> na Primary Assembly 27118876 na chr4 assembled-molecule 4 Chromosome CM106672.1 <> na Primary Assembly 26701570 na chr5 assembled-molecule 5 Chromosome CM106673.1 <> na Primary Assembly 23107397 na chr6 assembled-molecule 6 Chromosome CM106674.1 <> na Primary Assembly 20054979 na chr7 assembled-molecule 7 Chromosome CM106675.1 <> na Primary Assembly 20353802 na chr8 assembled-molecule 8 Chromosome CM106676.1 <> na Primary Assembly 19452185 na chr9 assembled-molecule 9 Chromosome CM106677.1 <> na Primary Assembly 18591087 na chr10 assembled-molecule 10 Chromosome CM106678.1 <> na Primary Assembly 18773293 na chr11 assembled-molecule 11 Chromosome CM106679.1 <> na Primary Assembly 19296231 na chr12 assembled-molecule 12 Chromosome CM106680.1 <> na Primary Assembly 17827264 na chr13 assembled-molecule 13 Chromosome CM106681.1 <> na Primary Assembly 17841086 na chr14 assembled-molecule 14 Chromosome CM106682.1 <> na Primary Assembly 16263513 na chr15 assembled-molecule 15 Chromosome CM106683.1 <> na Primary Assembly 15602215 na chr16 assembled-molecule 16 Chromosome CM106684.1 <> na Primary Assembly 15496607 na chr17 assembled-molecule 17 Chromosome CM106685.1 <> na Primary Assembly 14469329 na chr18 assembled-molecule 18 Chromosome CM106686.1 <> na Primary Assembly 14933247 na chr19 assembled-molecule 19 Chromosome CM106687.1 <> na Primary Assembly 14716534 na chr20 assembled-molecule 20 Chromosome CM106688.1 <> na Primary Assembly 14653491 na scaffold_36 unplaced-scaffold na na JBLUUD010000002.1 <> na Primary Assembly 65471 na scaffold_41 unplaced-scaffold na na JBLUUD010000003.1 <> na Primary Assembly 32491 na scaffold_50 unplaced-scaffold na na JBLUUD010000004.1 <> na Primary Assembly 2000 na scaffold_21 unplaced-scaffold na na JBLUUD010000008.1 <> na Primary Assembly 731000 na scaffold_43 unplaced-scaffold na na JBLUUD010000009.1 <> na Primary Assembly 26612 na scaffold_23 unplaced-scaffold na na JBLUUD010000010.1 <> na Primary Assembly 575554 na scaffold_26 unplaced-scaffold na na JBLUUD010000011.1 <> na Primary Assembly 233308 na scaffold_29 unplaced-scaffold na na JBLUUD010000013.1 <> na Primary Assembly 176000 na scaffold_46 unplaced-scaffold na na JBLUUD010000016.1 <> na Primary Assembly 15043 na scaffold_31 unplaced-scaffold na na JBLUUD010000018.1 <> na Primary Assembly 152000 na scaffold_49 unplaced-scaffold na na JBLUUD010000019.1 <> na Primary Assembly 2000 na scaffold_33 unplaced-scaffold na na JBLUUD010000021.1 <> na Primary Assembly 80595 na scaffold_52 unplaced-scaffold na na JBLUUD010000022.1 <> na Primary Assembly 1000 na scaffold_22 unplaced-scaffold na na JBLUUD010000024.1 <> na Primary Assembly 659000 na scaffold_24 unplaced-scaffold na na JBLUUD010000025.1 <> na Primary Assembly 489000 na scaffold_44 unplaced-scaffold na na JBLUUD010000026.1 <> na Primary Assembly 21715 na scaffold_42 unplaced-scaffold na na JBLUUD010000027.1 <> na Primary Assembly 31000 na scaffold_28 unplaced-scaffold na na JBLUUD010000029.1 <> na Primary Assembly 195332 na scaffold_27 unplaced-scaffold na na JBLUUD010000031.1 <> na Primary Assembly 201277 na scaffold_48 unplaced-scaffold na na JBLUUD010000032.1 <> na Primary Assembly 12961 na scaffold_35 unplaced-scaffold na na JBLUUD010000033.1 <> na Primary Assembly 68000 na scaffold_47 unplaced-scaffold na na JBLUUD010000035.1 <> na Primary Assembly 13000 na scaffold_30 unplaced-scaffold na na JBLUUD010000036.1 <> na Primary Assembly 174667 na scaffold_32 unplaced-scaffold na na JBLUUD010000037.1 <> na Primary Assembly 143002 na scaffold_53 unplaced-scaffold na na JBLUUD010000038.1 <> na Primary Assembly 15000 na scaffold_34 unplaced-scaffold na na JBLUUD010000039.1 <> na Primary Assembly 69967 na scaffold_40 unplaced-scaffold na na JBLUUD010000044.1 <> na Primary Assembly 48862 na scaffold_37 unplaced-scaffold na na JBLUUD010000045.1 <> na Primary Assembly 62000 na scaffold_51 unplaced-scaffold na na JBLUUD010000046.1 <> na Primary Assembly 1000 na scaffold_38 unplaced-scaffold na na JBLUUD010000047.1 <> na Primary Assembly 58000 na scaffold_45 unplaced-scaffold na na JBLUUD010000048.1 <> na Primary Assembly 15959 na scaffold_25 unplaced-scaffold na na JBLUUD010000050.1 <> na Primary Assembly 417000 na