# Assembly name: ASM4612878v1 # Organism name: Puccinia silphii (rust fungi) # Isolate: 20SaKS_TLI001 # Taxid: 2065218 # BioSample: SAMN44478667 # BioProject: PRJNA1178698 # Submitter: University of Colorado Boulder # Date: 2024-12-18 # Assembly type: haploid (haplotype 1) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JBISES01 # Assembly method: Hifiasm v. 0.16.1 # Expected final version: yes # Genome coverage: 52.0x # Sequencing technology: PacBio Sequel # GenBank assembly accession: GCA_046128785.1 # Linked assembly: GCA_050655635.1 (haplotype 2) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_046128795.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name Chromosome_01 assembled-molecule 1 Chromosome CM100750.1 <> na Primary Assembly 2809629 na Chromosome_02 assembled-molecule 2 Chromosome CM100751.1 <> na Primary Assembly 2809191 na Chromosome_03 assembled-molecule 3 Chromosome CM100752.1 <> na Primary Assembly 2757345 na Chromosome_04 assembled-molecule 4 Chromosome CM100753.1 <> na Primary Assembly 2604025 na Chromosome_05 assembled-molecule 5 Chromosome CM100754.1 <> na Primary Assembly 2293639 na Chromosome_06 assembled-molecule 6 Chromosome CM100755.1 <> na Primary Assembly 2253817 na Chromosome_07 assembled-molecule 7 Chromosome CM100756.1 <> na Primary Assembly 2245544 na Chromosome_08 assembled-molecule 8 Chromosome CM100757.1 <> na Primary Assembly 2175007 na Chromosome_09 assembled-molecule 9 Chromosome CM100758.1 <> na Primary Assembly 2158269 na Chromosome_10 assembled-molecule 10 Chromosome CM100759.1 <> na Primary Assembly 2106877 na Chromosome_11 assembled-molecule 11 Chromosome CM100760.1 <> na Primary Assembly 1903622 na Chromosome_12 assembled-molecule 12 Chromosome CM100761.1 <> na Primary Assembly 1706790 na Chromosome_13 assembled-molecule 13 Chromosome CM100762.1 <> na Primary Assembly 1661467 na Chromosome_14 assembled-molecule 14 Chromosome CM100763.1 <> na Primary Assembly 1632958 na Chromosome_15 assembled-molecule 15 Chromosome CM100764.1 <> na Primary Assembly 1523544 na Chromosome_16 assembled-molecule 16 Chromosome CM100765.1 <> na Primary Assembly 1469313 na Chromosome_17 assembled-molecule 17 Chromosome CM100766.1 <> na Primary Assembly 1374522 na Chromosome_18 assembled-molecule 18 Chromosome CM100767.1 <> na Primary Assembly 1331286 na Chromosome_19 assembled-molecule 19 Chromosome CM100768.1 <> na Primary Assembly 1295077 na ptg005015l unplaced-scaffold na na JBISES010000020.1 <> na Primary Assembly 129243 na ptg008783c unplaced-scaffold na na JBISES010000021.1 <> na Primary Assembly 69170 na ptg005510l unplaced-scaffold na na JBISES010000022.1 <> na Primary Assembly 56198 na ptg035255l unplaced-scaffold na na JBISES010000023.1 <> na Primary Assembly 56096 na ptg004729l unplaced-scaffold na na JBISES010000024.1 <> na Primary Assembly 50475 na ptg033379l unplaced-scaffold na na JBISES010000025.1 <> na Primary Assembly 48092 na ptg030575l unplaced-scaffold na na JBISES010000026.1 <> na Primary Assembly 47562 na ptg057385l unplaced-scaffold na na JBISES010000027.1 <> na Primary Assembly 43559 na ptg001212l unplaced-scaffold na na JBISES010000028.1 <> na Primary Assembly 41096 na ptg052683l unplaced-scaffold na na JBISES010000029.1 <> na Primary Assembly 38387 na ptg030425l unplaced-scaffold na na JBISES010000030.1 <> na Primary Assembly 37884 na ptg034621l unplaced-scaffold na na JBISES010000031.1 <> na Primary Assembly 37155 na ptg047467l unplaced-scaffold na na JBISES010000032.1 <> na Primary Assembly 35875 na ptg043970l unplaced-scaffold na na JBISES010000033.1 <> na Primary Assembly 34841 na ptg044293l unplaced-scaffold na na JBISES010000034.1 <> na Primary Assembly 34280 na ptg008096l unplaced-scaffold na na JBISES010000035.1 <> na Primary Assembly 34111 na ptg033409l unplaced-scaffold na na JBISES010000036.1 <> na Primary Assembly 32989 na ptg003338l unplaced-scaffold na na JBISES010000037.1 <> na Primary Assembly 31425 na ptg043949l unplaced-scaffold na na JBISES010000038.1 <> na Primary Assembly 30986 na ptg025289l unplaced-scaffold na na JBISES010000039.1 <> na Primary Assembly 30900 na ptg027825l unplaced-scaffold na na JBISES010000040.1 <> na Primary Assembly 30787 na ptg008595l unplaced-scaffold na na JBISES010000041.1 <> na Primary Assembly 30687 na ptg020491l unplaced-scaffold na na JBISES010000042.1 <> na Primary Assembly 30515 na ptg021286l unplaced-scaffold na na JBISES010000043.1 <> na Primary Assembly 29982 na ptg056872l unplaced-scaffold na na JBISES010000044.1 <> na Primary Assembly 29704 na ptg019276l unplaced-scaffold na na JBISES010000045.1 <> na Primary Assembly 29664 na ptg047873l unplaced-scaffold na na JBISES010000046.1 <> na Primary Assembly 29557 na ptg044763l unplaced-scaffold na na JBISES010000047.1 <> na Primary Assembly 29541 na ptg036656l unplaced-scaffold na na JBISES010000048.1 <> na Primary Assembly 29483 na ptg004802l unplaced-scaffold na na JBISES010000049.1 <> na Primary Assembly 28960 na ptg044991l unplaced-scaffold na na JBISES010000050.1 <> na Primary Assembly 28098 na ptg003157l unplaced-scaffold na na JBISES010000051.1 <> na Primary Assembly 28067 na ptg055982l unplaced-scaffold na na JBISES010000052.1 <> na Primary Assembly 27982 na ptg066052l unplaced-scaffold na na JBISES010000053.1 <> na Primary Assembly 27970 na ptg054327l unplaced-scaffold na na JBISES010000054.1 <> na Primary Assembly 27879 na ptg073236l unplaced-scaffold na na JBISES010000055.1 <> na Primary Assembly 27215 na ptg052264l unplaced-scaffold na na JBISES010000056.1 <> na Primary Assembly 27200 na ptg017217l unplaced-scaffold na na JBISES010000057.1 <> na Primary Assembly 27068 na ptg063532l unplaced-scaffold na na JBISES010000058.1 <> na Primary Assembly 27065 na ptg024020l unplaced-scaffold na na JBISES010000059.1 <> na Primary Assembly 27020 na ptg055859l unplaced-scaffold na na JBISES010000060.1 <> na Primary Assembly 26774 na ptg066897l unplaced-scaffold na na JBISES010000061.1 <> na Primary Assembly 20134 na ptg060259l unplaced-scaffold na na JBISES010000062.1 <> na Primary Assembly 26538 na ptg034249l unplaced-scaffold na na JBISES010000063.1 <> na Primary Assembly 26490 na ptg016978l unplaced-scaffold na na JBISES010000064.1 <> na Primary Assembly 26353 na ptg036602l unplaced-scaffold na na JBISES010000065.1 <> na Primary Assembly 26292 na ptg024714l unplaced-scaffold na na JBISES010000066.1 <> na Primary Assembly 26235 na ptg046590l unplaced-scaffold na na JBISES010000067.1 <> na Primary Assembly 25941 na ptg042497l unplaced-scaffold na na JBISES010000068.1 <> na Primary Assembly 25700 na ptg061929l unplaced-scaffold na na JBISES010000069.1 <> na Primary Assembly 25434 na ptg049973l unplaced-scaffold na na JBISES010000070.1 <> na Primary Assembly 25367 na ptg016695l unplaced-scaffold na na JBISES010000071.1 <> na Primary Assembly 25296 na ptg043505l unplaced-scaffold na na JBISES010000072.1 <> na Primary Assembly 25296 na ptg007005l unplaced-scaffold na na JBISES010000073.1 <> na Primary Assembly 25263 na ptg013591l unplaced-scaffold na na JBISES010000074.1 <> na Primary Assembly 25215 na ptg008376l unplaced-scaffold na na JBISES010000075.1 <> na Primary Assembly 25026 na ptg058952l unplaced-scaffold na na JBISES010000076.1 <> na Primary Assembly 24908 na ptg003343l unplaced-scaffold na na JBISES010000077.1 <> na Primary Assembly 24792 na ptg030036l unplaced-scaffold na na JBISES010000078.1 <> na Primary Assembly 24711 na ptg025993l unplaced-scaffold na na JBISES010000079.1 <> na Primary Assembly 24691 na ptg065538l unplaced-scaffold na na JBISES010000080.1 <> na Primary Assembly 24677 na ptg070026l unplaced-scaffold na na JBISES010000081.1 <> na Primary Assembly 24575 na ptg069015l unplaced-scaffold na na JBISES010000082.1 <> na Primary Assembly 24207 na ptg067790l unplaced-scaffold na na JBISES010000083.1 <> na Primary Assembly 23939 na ptg047939l unplaced-scaffold na na JBISES010000084.1 <> na Primary Assembly 23755 na ptg040236l unplaced-scaffold na na JBISES010000085.1 <> na Primary Assembly 23709 na ptg064289l unplaced-scaffold na na JBISES010000086.1 <> na Primary Assembly 23518 na ptg016025l unplaced-scaffold na na JBISES010000087.1 <> na Primary Assembly 23374 na ptg015073l unplaced-scaffold na na JBISES010000088.1 <> na Primary Assembly 23293 na ptg005821l unplaced-scaffold na na JBISES010000089.1 <> na Primary Assembly 23180 na ptg037695l unplaced-scaffold na na JBISES010000090.1 <> na Primary Assembly 22857 na ptg063778l unplaced-scaffold na na JBISES010000091.1 <> na Primary Assembly 22753 na ptg034710l unplaced-scaffold na na JBISES010000092.1 <> na Primary Assembly 22566 na ptg018728l unplaced-scaffold na na JBISES010000093.1 <> na Primary Assembly 22463 na ptg072378l unplaced-scaffold na na JBISES010000094.1 <> na Primary Assembly 22194 na ptg066672l unplaced-scaffold na na JBISES010000095.1 <> na Primary Assembly 22162 na ptg026138l unplaced-scaffold na na JBISES010000096.1 <> na Primary Assembly 22075 na ptg012474l unplaced-scaffold na na JBISES010000097.1 <> na Primary Assembly 21839 na ptg007715l unplaced-scaffold na na JBISES010000098.1 <> na Primary Assembly 21738 na ptg057345l unplaced-scaffold na na JBISES010000099.1 <> na Primary Assembly 21471 na ptg069736l unplaced-scaffold na na JBISES010000100.1 <> na Primary Assembly 21421 na ptg071503l unplaced-scaffold na na JBISES010000101.1 <> na Primary Assembly 21253 na ptg062666l unplaced-scaffold na na JBISES010000102.1 <> na Primary Assembly 20991 na ptg057694l unplaced-scaffold na na JBISES010000103.1 <> na Primary Assembly 20883 na ptg058044l unplaced-scaffold na na JBISES010000104.1 <> na Primary Assembly 20851 na ptg060751l unplaced-scaffold na na JBISES010000105.1 <> na Primary Assembly 20791 na ptg063444l unplaced-scaffold na na JBISES010000106.1 <> na Primary Assembly 20720 na ptg057274l unplaced-scaffold na na JBISES010000107.1 <> na Primary Assembly 20566 na ptg035603l unplaced-scaffold na na JBISES010000108.1 <> na Primary Assembly 20558 na ptg036791l unplaced-scaffold na na JBISES010000109.1 <> na Primary Assembly 20396 na ptg004736l unplaced-scaffold na na JBISES010000110.1 <> na Primary Assembly 20371 na ptg056472l unplaced-scaffold na na JBISES010000111.1 <> na Primary Assembly 20337 na ptg011417l unplaced-scaffold na na JBISES010000112.1 <> na Primary Assembly 20293 na ptg032461l unplaced-scaffold na na JBISES010000113.1 <> na Primary Assembly 20154 na ptg039369l unplaced-scaffold na na JBISES010000114.1 <> na Primary Assembly 20068 na ptg044845l unplaced-scaffold na na JBISES010000115.1 <> na Primary Assembly 19964 na ptg050701l unplaced-scaffold na na JBISES010000116.1 <> na Primary Assembly 19631 na ptg066872l unplaced-scaffold na na JBISES010000117.1 <> na Primary Assembly 19506 na ptg072904l unplaced-scaffold na na JBISES010000118.1 <> na Primary Assembly 18817 na ptg026983l unplaced-scaffold na na JBISES010000119.1 <> na Primary Assembly 18617 na ptg056029l unplaced-scaffold na na JBISES010000120.1 <> na Primary Assembly 18414 na ptg047815l unplaced-scaffold na na JBISES010000121.1 <> na Primary Assembly 18406 na ptg020291l unplaced-scaffold na na JBISES010000122.1 <> na Primary Assembly 18354 na ptg040742l unplaced-scaffold na na JBISES010000123.1 <> na Primary Assembly 18022 na ptg074347l unplaced-scaffold na na JBISES010000124.1 <> na Primary Assembly 17868 na ptg022728l unplaced-scaffold na na JBISES010000125.1 <> na Primary Assembly 17769 na ptg064323l unplaced-scaffold na na JBISES010000126.1 <> na Primary Assembly 17642 na ptg067429l unplaced-scaffold na na JBISES010000127.1 <> na Primary Assembly 17530 na ptg033427l unplaced-scaffold na na JBISES010000128.1 <> na Primary Assembly 17517 na ptg039450l unplaced-scaffold na na JBISES010000129.1 <> na Primary Assembly 17430 na ptg070691l unplaced-scaffold na na JBISES010000130.1 <> na Primary Assembly 17404 na ptg038142l unplaced-scaffold na na JBISES010000131.1 <> na Primary Assembly 17375 na ptg071751l unplaced-scaffold na na JBISES010000132.1 <> na Primary Assembly 17252 na ptg035356l unplaced-scaffold na na JBISES010000133.1 <> na Primary Assembly 17192 na ptg030001l unplaced-scaffold na na JBISES010000134.1 <> na Primary Assembly 17046 na ptg011796l unplaced-scaffold na na JBISES010000135.1 <> na Primary Assembly 16851 na ptg036759l unplaced-scaffold na na JBISES010000136.1 <> na Primary Assembly 16725 na ptg067242l unplaced-scaffold na na JBISES010000137.1 <> na Primary Assembly 16510 na ptg018965l unplaced-scaffold na na JBISES010000138.1 <> na Primary Assembly 16418 na ptg070010l unplaced-scaffold na na JBISES010000139.1 <> na Primary Assembly 16177 na ptg050809l unplaced-scaffold na na JBISES010000140.1 <> na Primary Assembly 15957 na ptg017452l unplaced-scaffold na na JBISES010000141.1 <> na Primary Assembly 15909 na ptg071701l unplaced-scaffold na na JBISES010000142.1 <> na Primary Assembly 15841 na ptg073451l unplaced-scaffold na na JBISES010000143.1 <> na Primary Assembly 15829 na ptg061444l unplaced-scaffold na na JBISES010000144.1 <> na Primary Assembly 15765 na ptg056648l unplaced-scaffold na na JBISES010000145.1 <> na Primary Assembly 15395 na ptg020105l unplaced-scaffold na na JBISES010000146.1 <> na Primary Assembly 15379 na ptg025984l unplaced-scaffold na na JBISES010000147.1 <> na Primary Assembly 14871 na ptg061588l unplaced-scaffold na na JBISES010000148.1 <> na Primary Assembly 14651 na ptg026617l unplaced-scaffold na na JBISES010000149.1 <> na Primary Assembly 14442 na ptg029345l unplaced-scaffold na na JBISES010000150.1 <> na Primary Assembly 14394 na ptg054527l unplaced-scaffold na na JBISES010000151.1 <> na Primary Assembly 14228 na ptg051416l unplaced-scaffold na na JBISES010000152.1 <> na Primary Assembly 13750 na ptg071844l unplaced-scaffold na na JBISES010000153.1 <> na Primary Assembly 13367 na ptg013796l unplaced-scaffold na na JBISES010000154.1 <> na Primary Assembly 13343 na ptg009430l unplaced-scaffold na na JBISES010000155.1 <> na Primary Assembly 12800 na ptg046086l unplaced-scaffold na na JBISES010000156.1 <> na Primary Assembly 12718 na ptg036683l unplaced-scaffold na na JBISES010000157.1 <> na Primary Assembly 12506 na ptg023980l unplaced-scaffold na na JBISES010000158.1 <> na Primary Assembly 12451 na ptg052793l unplaced-scaffold na na JBISES010000159.1 <> na Primary Assembly 12280 na ptg052170l unplaced-scaffold na na JBISES010000160.1 <> na Primary Assembly 12167 na ptg008645l unplaced-scaffold na na JBISES010000161.1 <> na Primary Assembly 6230 na