# Assembly name: NA20346_hap2_hprc_f2 # Organism name: Homo sapiens (human) # Isolate: NA20346 # Sex: male # Taxid: 9606 # BioSample: SAMN41021609 # BioProject: PRJNA1178387 # Submitter: UCSC Genomics Institute # Date: 2024-10-31 # Assembly type: haploid (haplotype 2) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JBIRDS01 # Assembly method: Hifiasm v. 0.19.9 # Expected final version: no # Genome coverage: 60x # Sequencing technology: PacBio; Oxford Nanopore # GenBank assembly accession: GCA_044166135.1 # Linked assembly: GCA_044166545.1 (haplotype 1) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_044166205.1 Primary Assembly ## GCA_044166215.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name NA20346#2#h1tg000005l assembled-molecule 1 Chromosome CM094259.1 <> na Primary Assembly 249807095 na NA20346#2#h1tg000003l assembled-molecule 3 Chromosome CM094260.1 <> na Primary Assembly 203565246 na NA20346#2#h1tg000019l assembled-molecule 5 Chromosome CM094261.1 <> na Primary Assembly 184999319 na NA20346#2#h1tg000014l assembled-molecule 6 Chromosome CM094262.1 <> na Primary Assembly 171754757 na NA20346#2#h1tg000020l assembled-molecule 7 Chromosome CM094263.1 <> na Primary Assembly 160453127 na NA20346#2#h1tg000009l assembled-molecule 8 Chromosome CM094264.1 <> na Primary Assembly 146574267 na NA20346#2#h1tg000015l assembled-molecule 10 Chromosome CM094265.1 <> na Primary Assembly 134780398 na NA20346#2#h1tg000004l assembled-molecule 11 Chromosome CM094266.1 <> na Primary Assembly 133867402 na NA20346#2#h1tg000001l assembled-molecule 12 Chromosome CM094267.1 <> na Primary Assembly 133643496 na NA20346#2#h1tg000017l assembled-molecule 15 Chromosome CM094268.1 <> na Primary Assembly 100327094 na NA20346#2#h1tg000011l assembled-molecule 16 Chromosome CM094269.1 <> na Primary Assembly 93531236 na NA20346#2#h1tg000025l assembled-molecule 18 Chromosome CM094270.1 <> na Primary Assembly 79752744 na NA20346#2#h1tg000016l assembled-molecule 19 Chromosome CM094271.1 <> na Primary Assembly 61508607 na NA20346#2#h1tg000021l assembled-molecule 20 Chromosome CM094272.1 <> na Primary Assembly 66842673 na NA20346#2#h1tg000002l unplaced-scaffold na na JBIRDS010000001.1 <> na Primary Assembly 91169448 na NA20346#2#h1tg000007l unplaced-scaffold na na JBIRDS010000002.1 <> na Primary Assembly 140364940 na NA20346#2#h1tg000008l unplaced-scaffold na na JBIRDS010000003.1 <> na Primary Assembly 52272629 na NA20346#2#h1tg000013l unplaced-scaffold na na JBIRDS010000005.1 <> na Primary Assembly 83042226 na NA20346#2#h1tg000024l unplaced-scaffold na na JBIRDS010000010.1 <> na Primary Assembly 77815513 na NA20346#2#h1tg000027l unplaced-scaffold na na JBIRDS010000011.1 <> na Primary Assembly 49708087 na NA20346#2#h1tg000029l unplaced-scaffold na na JBIRDS010000012.1 <> na Primary Assembly 41072836 na NA20346#2#h1tg000032l unplaced-scaffold na na JBIRDS010000013.1 <> na Primary Assembly 6655748 na NA20346#2#h1tg000033l unplaced-scaffold na na JBIRDS010000014.1 <> na Primary Assembly 624742 na NA20346#2#h1tg000034l unplaced-scaffold na na JBIRDS010000015.1 <> na Primary Assembly 293787 na NA20346#2#h1tg000036l unplaced-scaffold na na JBIRDS010000016.1 <> na Primary Assembly 140365 na NA20346#2#h1tg000040l unplaced-scaffold na na JBIRDS010000017.1 <> na Primary Assembly 119598 na NA20346#2#h1tg000042l unplaced-scaffold na na JBIRDS010000018.1 <> na Primary Assembly 288140 na NA20346#2#h1tg000045l unplaced-scaffold na na JBIRDS010000019.1 <> na Primary Assembly 132288 na NA20346#2#h1tg000053l unplaced-scaffold na na JBIRDS010000020.1 <> na Primary Assembly 315102 na NA20346#2#h1tg000054l unplaced-scaffold na na JBIRDS010000021.1 <> na Primary Assembly 1120946 na NA20346#2#h1tg000055l unplaced-scaffold na na JBIRDS010000022.1 <> na Primary Assembly 80875 na NA20346#2#h1tg000056l unplaced-scaffold na na JBIRDS010000023.1 <> na Primary Assembly 3412128 na NA20346#2#h1tg000057l unplaced-scaffold na na JBIRDS010000024.1 <> na Primary Assembly 268350 na NA20346#2#h1tg000058l unplaced-scaffold na na JBIRDS010000025.1 <> na Primary Assembly 61949 na NA20346#2#h1tg000065l unplaced-scaffold na na JBIRDS010000026.1 <> na Primary Assembly 365475 na NA20346#2#h1tg000068l unplaced-scaffold na na JBIRDS010000027.1 <> na Primary Assembly 61731 na NA20346#2#h1tg000069l unplaced-scaffold na na JBIRDS010000028.1 <> na Primary Assembly 879457 na NA20346#2#h1tg000071l unplaced-scaffold na na JBIRDS010000029.1 <> na Primary Assembly 57653 na NA20346#2#h1tg000072l unplaced-scaffold na na JBIRDS010000030.1 <> na Primary Assembly 233389 na NA20346#2#h1tg000073l unplaced-scaffold na na JBIRDS010000031.1 <> na Primary Assembly 691440 na NA20346#2#h1tg000074l unplaced-scaffold na na JBIRDS010000032.1 <> na Primary Assembly 102924 na NA20346#2#h1tg000078l unplaced-scaffold na na JBIRDS010000033.1 <> na Primary Assembly 109014 na NA20346#2#h1tg000084l unplaced-scaffold na na JBIRDS010000034.1 <> na Primary Assembly 77111 na NA20346#2#h1tg000085l unplaced-scaffold na na JBIRDS010000035.1 <> na Primary Assembly 89410 na NA20346#2#h1tg000086l unplaced-scaffold na na JBIRDS010000036.1 <> na Primary Assembly 95967 na NA20346#2#h1tg000090l unplaced-scaffold na na JBIRDS010000037.1 <> na Primary Assembly 107469 na NA20346#2#h1tg000092l unplaced-scaffold na na JBIRDS010000038.1 <> na Primary Assembly 80990 na NA20346#2#h1tg000094l unplaced-scaffold na na JBIRDS010000039.1 <> na Primary Assembly 199947 na NA20346#2#h1tg000100l unplaced-scaffold na na JBIRDS010000040.1 <> na Primary Assembly 71206 na NA20346#2#h1tg000113l unplaced-scaffold na na JBIRDS010000041.1 <> na Primary Assembly 64207 na NA20346#2#h1tg000116l unplaced-scaffold na na JBIRDS010000042.1 <> na Primary Assembly 90111 na NA20346#2#h1tg000128l unplaced-scaffold na na JBIRDS010000043.1 <> na Primary Assembly 89742 na NA20346#2#h1tg000137l unplaced-scaffold na na JBIRDS010000044.1 <> na Primary Assembly 69867 na NA20346#2#h1tg000138l unplaced-scaffold na na JBIRDS010000045.1 <> na Primary Assembly 173081 na NA20346#2#h1tg000140l unplaced-scaffold na na JBIRDS010000046.1 <> na Primary Assembly 55025 na NA20346#2#h1tg000144l unplaced-scaffold na na JBIRDS010000047.1 <> na Primary Assembly 57276 na NA20346#2#h1tg000149l unplaced-scaffold na na JBIRDS010000048.1 <> na Primary Assembly 73901 na NA20346#2#h1tg000152l unplaced-scaffold na na JBIRDS010000049.1 <> na Primary Assembly 59976 na NA20346#2#h1tg000154l unplaced-scaffold na na JBIRDS010000050.1 <> na Primary Assembly 65613 na NA20346#2#h2tg000067l unplaced-scaffold na na JBIRDS010000051.1 <> na Primary Assembly 68492 na NA20346#2#h1tg000006l unplaced-scaffold na na JBIRDS010000056.1 <> na Primary Assembly 242050062 na NA20346#2#h1tg000010l unplaced-scaffold na na JBIRDS010000058.1 <> na Primary Assembly 58322481 na NA20346#2#h1tg000018l unplaced-scaffold na na JBIRDS010000059.1 <> na Primary Assembly 26117161 na NA20346#2#h1tg000022l unplaced-scaffold na na JBIRDS010000063.1 <> na Primary Assembly 53522217 na NA20346#2#h1tg000023l unplaced-scaffold na na JBIRDS010000064.1 <> na Primary Assembly 37994716 na NA20346#2#h1tg000026l unplaced-scaffold na na JBIRDS010000066.1 <> na Primary Assembly 57174814 na NA20346#2#h1tg000028l unplaced-scaffold na na JBIRDS010000067.1 <> na Primary Assembly 52138160 na NA20346#2#h1tg000030l unplaced-scaffold na na JBIRDS010000068.1 <> na Primary Assembly 4751989 na NA20346#2#h1tg000031l unplaced-scaffold na na JBIRDS010000069.1 <> na Primary Assembly 19166674 na NA20346#2#h1tg000037l unplaced-scaffold na na JBIRDS010000070.1 <> na Primary Assembly 4966986 na NA20346#2#h1tg000039l unplaced-scaffold na na JBIRDS010000071.1 <> na Primary Assembly 134048 na NA20346#2#h1tg000041l unplaced-scaffold na na JBIRDS010000072.1 <> na Primary Assembly 2453614 na NA20346#2#h1tg000043l unplaced-scaffold na na JBIRDS010000073.1 <> na Primary Assembly 338667 na NA20346#2#h1tg000044l unplaced-scaffold na na JBIRDS010000074.1 <> na Primary Assembly 119566 na NA20346#2#h1tg000049l unplaced-scaffold na na JBIRDS010000075.1 <> na Primary Assembly 687175 na NA20346#2#h1tg000051l unplaced-scaffold na na JBIRDS010000076.1 <> na Primary Assembly 336535 na NA20346#2#h1tg000052l unplaced-scaffold na na JBIRDS010000077.1 <> na Primary Assembly 123160 na NA20346#2#h1tg000060l unplaced-scaffold na na JBIRDS010000078.1 <> na Primary Assembly 126905 na NA20346#2#h1tg000061l unplaced-scaffold na na JBIRDS010000079.1 <> na Primary Assembly 383253 na NA20346#2#h1tg000064l unplaced-scaffold na na JBIRDS010000080.1 <> na Primary Assembly 134820 na NA20346#2#h1tg000067l unplaced-scaffold na na JBIRDS010000081.1 <> na Primary Assembly 1260270 na NA20346#2#h1tg000070l unplaced-scaffold na na JBIRDS010000082.1 <> na Primary Assembly 238473 na NA20346#2#h1tg000075l unplaced-scaffold na na JBIRDS010000083.1 <> na Primary Assembly 502709 na NA20346#2#h1tg000076l unplaced-scaffold na na JBIRDS010000084.1 <> na Primary Assembly 375622 na NA20346#2#h1tg000077l unplaced-scaffold na na JBIRDS010000085.1 <> na Primary Assembly 128606 na NA20346#2#h1tg000079l unplaced-scaffold na na JBIRDS010000086.1 <> na Primary Assembly 157444 na NA20346#2#h1tg000081l unplaced-scaffold na na JBIRDS010000087.1 <> na Primary Assembly 70325 na NA20346#2#h1tg000082l unplaced-scaffold na na JBIRDS010000088.1 <> na Primary Assembly 241053 na NA20346#2#h1tg000087l unplaced-scaffold na na JBIRDS010000089.1 <> na Primary Assembly 165409 na NA20346#2#h1tg000088l unplaced-scaffold na na JBIRDS010000090.1 <> na Primary Assembly 130304 na NA20346#2#h1tg000089l unplaced-scaffold na na JBIRDS010000091.1 <> na Primary Assembly 97700 na NA20346#2#h1tg000095l unplaced-scaffold na na JBIRDS010000092.1 <> na Primary Assembly 210249 na NA20346#2#h1tg000097l unplaced-scaffold na na JBIRDS010000093.1 <> na Primary Assembly 134685 na NA20346#2#h1tg000104l unplaced-scaffold na na JBIRDS010000094.1 <> na Primary Assembly 98900 na NA20346#2#h1tg000106l unplaced-scaffold na na JBIRDS010000095.1 <> na Primary Assembly 108780 na NA20346#2#h1tg000107l unplaced-scaffold na na JBIRDS010000096.1 <> na Primary Assembly 79172 na NA20346#2#h1tg000111l unplaced-scaffold na na JBIRDS010000097.1 <> na Primary Assembly 67116 na NA20346#2#h1tg000112l unplaced-scaffold na na JBIRDS010000098.1 <> na Primary Assembly 134871 na NA20346#2#h1tg000115l unplaced-scaffold na na JBIRDS010000099.1 <> na Primary Assembly 101130 na NA20346#2#h1tg000117l unplaced-scaffold na na JBIRDS010000100.1 <> na Primary Assembly 72378 na NA20346#2#h1tg000118l unplaced-scaffold na na JBIRDS010000101.1 <> na Primary Assembly 9040942 na NA20346#2#h1tg000119l unplaced-scaffold na na JBIRDS010000102.1 <> na Primary Assembly 88902 na NA20346#2#h1tg000124l unplaced-scaffold na na JBIRDS010000103.1 <> na Primary Assembly 75176 na NA20346#2#h1tg000125l unplaced-scaffold na na JBIRDS010000104.1 <> na Primary Assembly 67040 na NA20346#2#h1tg000134l unplaced-scaffold na na JBIRDS010000105.1 <> na Primary Assembly 92383 na NA20346#2#h1tg000145l unplaced-scaffold na na JBIRDS010000106.1 <> na Primary Assembly 55392 na NA20346#2#h1tg000151l unplaced-scaffold na na JBIRDS010000107.1 <> na Primary Assembly 53557 na NA20346#2#atg000017l_rotated unlocalized-scaffold MT Mitochondrion JBIRDS010000108.1 <> na non-nuclear 16570 na