# Assembly name: ASM4388211v1 # Organism name: Bos taurus (domestic cattle) # Infraspecific name: breed=Mongolian cattle # Isolate: 80415 # Sex: male # Taxid: 9913 # BioSample: SAMN42835594 # BioProject: PRJNA1140538 # Submitter: Shanghai Jiao Tong University # Date: 2024-10-25 # Assembly type: haploid # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JBFSJU01 # Assembly method: Hifiasm v. 0.16.1-r375; purge_dups v. 1.2.5; Chromap v. 0.2.5-r473; yahs v. 1.2 # Expected final version: yes # Genome coverage: 87x # Sequencing technology: PacBio Sequel # GenBank assembly accession: GCA_043882115.1 # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_043882425.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name 1 assembled-molecule 1 Chromosome CM093578.1 <> na Primary Assembly 171934863 na 2 assembled-molecule 2 Chromosome CM093579.1 <> na Primary Assembly 153109465 na 3 assembled-molecule 3 Chromosome CM093580.1 <> na Primary Assembly 132045504 na 4 assembled-molecule 4 Chromosome CM093581.1 <> na Primary Assembly 130299704 na 5 assembled-molecule 5 Chromosome CM093582.1 <> na Primary Assembly 131952095 na 6 assembled-molecule 6 Chromosome CM093583.1 <> na Primary Assembly 125339015 na 7 assembled-molecule 7 Chromosome CM093584.1 <> na Primary Assembly 110926873 na 8 assembled-molecule 8 Chromosome CM093585.1 <> na Primary Assembly 129790716 na 9 assembled-molecule 9 Chromosome CM093586.1 <> na Primary Assembly 114904453 na 10 assembled-molecule 10 Chromosome CM093587.1 <> na Primary Assembly 114328211 na 11 assembled-molecule 11 Chromosome CM093588.1 <> na Primary Assembly 114482438 na 12 assembled-molecule 12 Chromosome CM093589.1 <> na Primary Assembly 104536671 na 13 assembled-molecule 13 Chromosome CM093590.1 <> na Primary Assembly 91902264 na 14 assembled-molecule 14 Chromosome CM093591.1 <> na Primary Assembly 91941331 na 15 assembled-molecule 15 Chromosome CM093592.1 <> na Primary Assembly 99592396 na 16 assembled-molecule 16 Chromosome CM093593.1 <> na Primary Assembly 91535255 na 17 assembled-molecule 17 Chromosome CM093594.1 <> na Primary Assembly 81334151 na 18 assembled-molecule 18 Chromosome CM093595.1 <> na Primary Assembly 75532343 na 19 assembled-molecule 19 Chromosome CM093596.1 <> na Primary Assembly 70131363 na 20 assembled-molecule 20 Chromosome CM093597.1 <> na Primary Assembly 84955099 na 21 assembled-molecule 21 Chromosome CM093598.1 <> na Primary Assembly 83288178 na 22 assembled-molecule 22 Chromosome CM093599.1 <> na Primary Assembly 76262585 na 23 assembled-molecule 23 Chromosome CM093600.1 <> na Primary Assembly 53559643 na 24 assembled-molecule 24 Chromosome CM093601.1 <> na Primary Assembly 63313571 na 25 assembled-molecule 25 Chromosome CM093602.1 <> na Primary Assembly 47970050 na 26 assembled-molecule 26 Chromosome CM093603.1 <> na Primary Assembly 59498683 na 27 assembled-molecule 27 Chromosome CM093604.1 <> na Primary Assembly 57212331 na 28 assembled-molecule 28 Chromosome CM093605.1 <> na Primary Assembly 56613481 na 29 assembled-molecule 29 Chromosome CM093606.1 <> na Primary Assembly 56717265 na X assembled-molecule X Chromosome CM093607.1 <> na Primary Assembly 174471981 na Y assembled-molecule Y Chromosome CM093608.1 <> na Primary Assembly 49935402 na s31 unplaced-scaffold na na JBFSJU010000032.1 <> na Primary Assembly 14433686 na s32 unplaced-scaffold na na JBFSJU010000033.1 <> na Primary Assembly 13723387 na s33 unplaced-scaffold na na JBFSJU010000034.1 <> na Primary Assembly 12737441 na s34 unplaced-scaffold na na JBFSJU010000035.1 <> na Primary Assembly 12413485 na s37 unplaced-scaffold na na JBFSJU010000036.1 <> na Primary Assembly 8915479 na s40 unplaced-scaffold na na JBFSJU010000037.1 <> na Primary Assembly 8367947 na s41 unplaced-scaffold na na JBFSJU010000038.1 <> na Primary Assembly 8217165 na s42 unplaced-scaffold na na JBFSJU010000039.1 <> na Primary Assembly 8104683 na s43 unplaced-scaffold na na JBFSJU010000040.1 <> na Primary Assembly 6124424 na s44 unplaced-scaffold na na JBFSJU010000041.1 <> na Primary Assembly 5604516 na s45 unplaced-scaffold na na JBFSJU010000042.1 <> na Primary Assembly 4628991 na t1 unplaced-scaffold na na JBFSJU010000043.1 <> na Primary Assembly 1998861 na t2 unplaced-scaffold na na JBFSJU010000044.1 <> na Primary Assembly 240946 na s52 unplaced-scaffold na na JBFSJU010000045.1 <> na Primary Assembly 2841 na s53 unplaced-scaffold na na JBFSJU010000046.1 <> na Primary Assembly 446 na