# Assembly name: HG00146_hap2_hprc_f2 # Organism name: Homo sapiens (human) # Isolate: HG00146 # Sex: female # Taxid: 9606 # BioSample: SAMN41021634 # BioProject: PRJNA1160746 # Submitter: UCSC Genomics Institute # Date: 2024-09-20 # Assembly type: haploid (haplotype 2) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JBHIKP01 # Assembly method: Hifiasm v. 0.19.9 # Expected final version: no # Genome coverage: 73x # Sequencing technology: PacBio; Oxford Nanopore # GenBank assembly accession: GCA_042078085.1 # Linked assembly: GCA_042077995.1 (haplotype 1) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_042078095.1 Primary Assembly ## GCA_042078105.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name HG00146#2#h2tg000021l assembled-molecule 2 Chromosome CM090034.1 <> na Primary Assembly 242344999 na HG00146#2#h2tg000002l assembled-molecule 4 Chromosome CM090035.1 <> na Primary Assembly 191729011 na HG00146#2#h2tg000024l assembled-molecule 5 Chromosome CM090036.1 <> na Primary Assembly 182821864 na HG00146#2#h2tg000006l assembled-molecule 7 Chromosome CM090037.1 <> na Primary Assembly 160914356 na HG00146#2#h2tg000008l assembled-molecule 10 Chromosome CM090038.1 <> na Primary Assembly 136506971 na HG00146#2#h2tg000025l assembled-molecule 11 Chromosome CM090039.1 <> na Primary Assembly 135147206 na HG00146#2#h2tg000001l assembled-molecule 12 Chromosome CM090040.1 <> na Primary Assembly 133468945 na HG00146#2#h2tg000013l assembled-molecule 16 Chromosome CM090041.1 <> na Primary Assembly 92035123 na HG00146#2#h2tg000010l assembled-molecule 17 Chromosome CM090042.1 <> na Primary Assembly 82035663 na HG00146#2#h2tg000031l assembled-molecule 20 Chromosome CM090043.1 <> na Primary Assembly 66673677 na HG00146#2#h2tg000009l assembled-molecule X Chromosome CM090044.1 <> na Primary Assembly 155239930 na HG00146#2#h2tg000003l unplaced-scaffold na na JBHIKP010000002.1 <> na Primary Assembly 104337619 na HG00146#2#h2tg000004l unplaced-scaffold na na JBHIKP010000003.1 <> na Primary Assembly 108585670 na HG00146#2#h2tg000011l unplaced-scaffold na na JBHIKP010000006.1 <> na Primary Assembly 58990835 na HG00146#2#h2tg000015l unplaced-scaffold na na JBHIKP010000007.1 <> na Primary Assembly 35349243 na HG00146#2#h2tg000017l unplaced-scaffold na na JBHIKP010000008.1 <> na Primary Assembly 61575601 na HG00146#2#h2tg000019l unplaced-scaffold na na JBHIKP010000009.1 <> na Primary Assembly 87031762 na HG00146#2#h2tg000022l unplaced-scaffold na na JBHIKP010000010.1 <> na Primary Assembly 137878907 na HG00146#2#h2tg000027l unplaced-scaffold na na JBHIKP010000012.1 <> na Primary Assembly 111526989 na HG00146#2#h2tg000029l unplaced-scaffold na na JBHIKP010000013.1 <> na Primary Assembly 109151757 na HG00146#2#h2tg000032l unplaced-scaffold na na JBHIKP010000014.1 <> na Primary Assembly 11490810 na HG00146#2#h2tg000033l unplaced-scaffold na na JBHIKP010000015.1 <> na Primary Assembly 16240941 na HG00146#2#h2tg000034l unplaced-scaffold na na JBHIKP010000016.1 <> na Primary Assembly 4498699 na HG00146#2#h2tg000037l unplaced-scaffold na na JBHIKP010000017.1 <> na Primary Assembly 6493238 na HG00146#2#h2tg000039l unplaced-scaffold na na JBHIKP010000018.1 <> na Primary Assembly 574662 na HG00146#2#h2tg000041l unplaced-scaffold na na JBHIKP010000019.1 <> na Primary Assembly 689116 na HG00146#2#h2tg000043l unplaced-scaffold na na JBHIKP010000020.1 <> na Primary Assembly 2988286 na HG00146#2#h2tg000044l unplaced-scaffold na na JBHIKP010000021.1 <> na Primary Assembly 1985185 na HG00146#2#h2tg000045l unplaced-scaffold na na JBHIKP010000022.1 <> na Primary Assembly 1391204 na HG00146#2#h2tg000046l unplaced-scaffold na na JBHIKP010000023.1 <> na Primary Assembly 257983 na HG00146#2#h2tg000049l unplaced-scaffold na na JBHIKP010000024.1 <> na Primary Assembly 3755252 na HG00146#2#h2tg000051l unplaced-scaffold na na JBHIKP010000025.1 <> na Primary Assembly 921155 na HG00146#2#h2tg000052l unplaced-scaffold na na JBHIKP010000026.1 <> na Primary Assembly 186412 na HG00146#2#h2tg000053l unplaced-scaffold na na JBHIKP010000027.1 <> na Primary Assembly 72891 na HG00146#2#h2tg000054l unplaced-scaffold na na JBHIKP010000028.1 <> na Primary Assembly 219647 na HG00146#2#h2tg000057l unplaced-scaffold na na JBHIKP010000029.1 <> na Primary Assembly 138297 na HG00146#2#h2tg000058l unplaced-scaffold na na JBHIKP010000030.1 <> na Primary Assembly 155193 na HG00146#2#h2tg000060l unplaced-scaffold na na JBHIKP010000031.1 <> na Primary Assembly 596800 na HG00146#2#h2tg000062l unplaced-scaffold na na JBHIKP010000032.1 <> na Primary Assembly 231436 na HG00146#2#h2tg000064l unplaced-scaffold na na JBHIKP010000033.1 <> na Primary Assembly 300976 na HG00146#2#h2tg000071l unplaced-scaffold na na JBHIKP010000034.1 <> na Primary Assembly 180337 na HG00146#2#h2tg000074l unplaced-scaffold na na JBHIKP010000035.1 <> na Primary Assembly 287508 na HG00146#2#h2tg000075l unplaced-scaffold na na JBHIKP010000036.1 <> na Primary Assembly 470952 na HG00146#2#h2tg000084l unplaced-scaffold na na JBHIKP010000037.1 <> na Primary Assembly 62685 na HG00146#2#h2tg000088l unplaced-scaffold na na JBHIKP010000038.1 <> na Primary Assembly 102286 na HG00146#2#h2tg000091l unplaced-scaffold na na JBHIKP010000039.1 <> na Primary Assembly 78107 na HG00146#2#h2tg000095l unplaced-scaffold na na JBHIKP010000040.1 <> na Primary Assembly 69641 na HG00146#2#h2tg000100l unplaced-scaffold na na JBHIKP010000041.1 <> na Primary Assembly 90623 na HG00146#2#h2tg000102l unplaced-scaffold na na JBHIKP010000042.1 <> na Primary Assembly 115428 na HG00146#2#h2tg000005l unplaced-scaffold na na JBHIKP010000044.1 <> na Primary Assembly 143771139 na HG00146#2#h2tg000007l unplaced-scaffold na na JBHIKP010000045.1 <> na Primary Assembly 37776967 na HG00146#2#h2tg000012l unplaced-scaffold na na JBHIKP010000048.1 <> na Primary Assembly 56781085 na HG00146#2#h2tg000014l unplaced-scaffold na na JBHIKP010000050.1 <> na Primary Assembly 1332196 na HG00146#2#h2tg000016l unplaced-scaffold na na JBHIKP010000051.1 <> na Primary Assembly 103451496 na HG00146#2#h2tg000018l unplaced-scaffold na na JBHIKP010000052.1 <> na Primary Assembly 85469143 na HG00146#2#h2tg000020l unplaced-scaffold na na JBHIKP010000053.1 <> na Primary Assembly 49042862 na HG00146#2#h2tg000023l unplaced-scaffold na na JBHIKP010000055.1 <> na Primary Assembly 13973784 na HG00146#2#h2tg000026l unplaced-scaffold na na JBHIKP010000057.1 <> na Primary Assembly 4254707 na HG00146#2#h2tg000028l unplaced-scaffold na na JBHIKP010000058.1 <> na Primary Assembly 92365550 na HG00146#2#h2tg000030l unplaced-scaffold na na JBHIKP010000059.1 <> na Primary Assembly 12685089 na HG00146#2#h2tg000035l unplaced-scaffold na na JBHIKP010000061.1 <> na Primary Assembly 454350 na HG00146#2#h2tg000036l unplaced-scaffold na na JBHIKP010000062.1 <> na Primary Assembly 3491858 na HG00146#2#h2tg000038l unplaced-scaffold na na JBHIKP010000063.1 <> na Primary Assembly 3244486 na HG00146#2#h2tg000040l unplaced-scaffold na na JBHIKP010000064.1 <> na Primary Assembly 560567 na HG00146#2#h2tg000042l unplaced-scaffold na na JBHIKP010000065.1 <> na Primary Assembly 73126 na HG00146#2#h2tg000047l unplaced-scaffold na na JBHIKP010000066.1 <> na Primary Assembly 153713 na HG00146#2#h2tg000048l unplaced-scaffold na na JBHIKP010000067.1 <> na Primary Assembly 1000273 na HG00146#2#h2tg000055l unplaced-scaffold na na JBHIKP010000068.1 <> na Primary Assembly 1255754 na HG00146#2#h2tg000056l unplaced-scaffold na na JBHIKP010000069.1 <> na Primary Assembly 98098 na HG00146#2#h2tg000061l unplaced-scaffold na na JBHIKP010000070.1 <> na Primary Assembly 398239 na HG00146#2#h2tg000065l unplaced-scaffold na na JBHIKP010000071.1 <> na Primary Assembly 212183 na HG00146#2#h2tg000066l unplaced-scaffold na na JBHIKP010000072.1 <> na Primary Assembly 191609 na HG00146#2#h2tg000067l unplaced-scaffold na na JBHIKP010000073.1 <> na Primary Assembly 260735 na HG00146#2#h2tg000068l unplaced-scaffold na na JBHIKP010000074.1 <> na Primary Assembly 98579 na HG00146#2#h2tg000069l unplaced-scaffold na na JBHIKP010000075.1 <> na Primary Assembly 75988 na HG00146#2#h2tg000070l unplaced-scaffold na na JBHIKP010000076.1 <> na Primary Assembly 62668 na HG00146#2#h2tg000073l unplaced-scaffold na na JBHIKP010000077.1 <> na Primary Assembly 230068 na HG00146#2#h2tg000077l unplaced-scaffold na na JBHIKP010000078.1 <> na Primary Assembly 160226 na HG00146#2#h2tg000078l unplaced-scaffold na na JBHIKP010000079.1 <> na Primary Assembly 52301 na HG00146#2#h2tg000081l unplaced-scaffold na na JBHIKP010000080.1 <> na Primary Assembly 88434 na HG00146#2#h2tg000086l unplaced-scaffold na na JBHIKP010000081.1 <> na Primary Assembly 90124 na HG00146#2#h2tg000098l unplaced-scaffold na na JBHIKP010000082.1 <> na Primary Assembly 124152 na HG00146#2#h2tg000099l unplaced-scaffold na na JBHIKP010000083.1 <> na Primary Assembly 65856 na HG00146#2#h2tg000101l unplaced-scaffold na na JBHIKP010000084.1 <> na Primary Assembly 145617 na HG00146#2#atg000003l_rc_rotated unlocalized-scaffold MT Mitochondrion JBHIKP010000085.1 <> na non-nuclear 16563 na