# Assembly name: NA18620_hap2_hprc_f2 # Organism name: Homo sapiens (human) # Isolate: NA18620 # Sex: male # Taxid: 9606 # BioSample: SAMN41021618 # BioProject: PRJNA1160736 # Submitter: UCSC Genomics Institute # Date: 2024-09-20 # Assembly type: haploid (haplotype 2) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JBHIJV01 # Assembly method: Hifiasm v. 0.19.9 # Expected final version: no # Genome coverage: 68x # Sequencing technology: PacBio; Oxford Nanopore # GenBank assembly accession: GCA_042077305.1 # Linked assembly: GCA_042077615.1 (haplotype 1) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_042077355.1 Primary Assembly ## GCA_042077365.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name NA18620#2#h2tg000002l assembled-molecule 1 Chromosome CM089828.1 <> na Primary Assembly 248565448 na NA18620#2#h2tg000012l assembled-molecule 2 Chromosome CM089829.1 <> na Primary Assembly 242035372 na NA18620#2#h2tg000015l assembled-molecule 3 Chromosome CM089830.1 <> na Primary Assembly 200576262 na NA18620#2#h2tg000022l assembled-molecule 5 Chromosome CM089831.1 <> na Primary Assembly 182908282 na NA18620#2#h2tg000020l assembled-molecule 8 Chromosome CM089832.1 <> na Primary Assembly 145692257 na NA18620#2#h2tg000014l assembled-molecule 10 Chromosome CM089833.1 <> na Primary Assembly 134964041 na NA18620#2#h2tg000026l assembled-molecule 11 Chromosome CM089834.1 <> na Primary Assembly 137595772 na NA18620#2#h2tg000001l assembled-molecule 12 Chromosome CM089835.1 <> na Primary Assembly 133930769 na NA18620#2#h2tg000004l assembled-molecule 16 Chromosome CM089836.1 <> na Primary Assembly 88238482 na NA18620#2#h2tg000024l assembled-molecule 18 Chromosome CM089837.1 <> na Primary Assembly 80210348 na NA18620#2#h2tg000003l assembled-molecule X Chromosome CM089838.1 <> na Primary Assembly 153951882 na NA18620#2#h2tg000006l unplaced-scaffold na na JBHIJV010000003.1 <> na Primary Assembly 111808007 na NA18620#2#h2tg000008l unplaced-scaffold na na JBHIJV010000004.1 <> na Primary Assembly 25907515 na NA18620#2#h2tg000009l unplaced-scaffold na na JBHIJV010000005.1 <> na Primary Assembly 24805768 na NA18620#2#h2tg000011l unplaced-scaffold na na JBHIJV010000006.1 <> na Primary Assembly 15048815 na NA18620#2#h2tg000013l unplaced-scaffold na na JBHIJV010000007.1 <> na Primary Assembly 38508828 na NA18620#2#h2tg000018l unplaced-scaffold na na JBHIJV010000010.1 <> na Primary Assembly 141729039 na NA18620#2#h2tg000023l unplaced-scaffold na na JBHIJV010000012.1 <> na Primary Assembly 51306539 na NA18620#2#h2tg000025l unplaced-scaffold na na JBHIJV010000014.1 <> na Primary Assembly 99835144 na NA18620#2#h2tg000027l unplaced-scaffold na na JBHIJV010000015.1 <> na Primary Assembly 28465352 na NA18620#2#h2tg000030l unplaced-scaffold na na JBHIJV010000016.1 <> na Primary Assembly 45489221 na NA18620#2#h2tg000032l unplaced-scaffold na na JBHIJV010000017.1 <> na Primary Assembly 1992303 na NA18620#2#h2tg000033l unplaced-scaffold na na JBHIJV010000018.1 <> na Primary Assembly 1192730 na NA18620#2#h2tg000037l unplaced-scaffold na na JBHIJV010000019.1 <> na Primary Assembly 1051367 na NA18620#2#h2tg000045l unplaced-scaffold na na JBHIJV010000020.1 <> na Primary Assembly 601287 na NA18620#2#h2tg000051l unplaced-scaffold na na JBHIJV010000021.1 <> na Primary Assembly 461285 na NA18620#2#h2tg000052l unplaced-scaffold na na JBHIJV010000022.1 <> na Primary Assembly 437645 na NA18620#2#h2tg000054l unplaced-scaffold na na JBHIJV010000023.1 <> na Primary Assembly 436647 na NA18620#2#h2tg000056l unplaced-scaffold na na JBHIJV010000024.1 <> na Primary Assembly 81376 na NA18620#2#h2tg000057l unplaced-scaffold na na JBHIJV010000025.1 <> na Primary Assembly 116381 na NA18620#2#h2tg000058l unplaced-scaffold na na JBHIJV010000026.1 <> na Primary Assembly 2826116 na NA18620#2#h2tg000059l unplaced-scaffold na na JBHIJV010000027.1 <> na Primary Assembly 85807 na NA18620#2#h2tg000065l unplaced-scaffold na na JBHIJV010000028.1 <> na Primary Assembly 262414 na NA18620#2#h2tg000066l unplaced-scaffold na na JBHIJV010000029.1 <> na Primary Assembly 203583 na NA18620#2#h2tg000067l unplaced-scaffold na na JBHIJV010000030.1 <> na Primary Assembly 208399 na NA18620#2#h2tg000069l unplaced-scaffold na na JBHIJV010000031.1 <> na Primary Assembly 410961 na NA18620#2#h2tg000070l unplaced-scaffold na na JBHIJV010000032.1 <> na Primary Assembly 61056 na NA18620#2#h2tg000072l unplaced-scaffold na na JBHIJV010000033.1 <> na Primary Assembly 558954 na NA18620#2#h2tg000074l unplaced-scaffold na na JBHIJV010000034.1 <> na Primary Assembly 119537 na NA18620#2#h2tg000075l unplaced-scaffold na na JBHIJV010000035.1 <> na Primary Assembly 59690 na NA18620#2#h2tg000076l unplaced-scaffold na na JBHIJV010000036.1 <> na Primary Assembly 116985 na NA18620#2#h2tg000078l unplaced-scaffold na na JBHIJV010000037.1 <> na Primary Assembly 246561 na NA18620#2#h2tg000079l unplaced-scaffold na na JBHIJV010000038.1 <> na Primary Assembly 138713 na NA18620#2#h2tg000081l unplaced-scaffold na na JBHIJV010000039.1 <> na Primary Assembly 55674 na NA18620#2#h2tg000085l unplaced-scaffold na na JBHIJV010000040.1 <> na Primary Assembly 90555 na NA18620#2#h2tg000086l unplaced-scaffold na na JBHIJV010000041.1 <> na Primary Assembly 187841 na NA18620#2#h2tg000089l unplaced-scaffold na na JBHIJV010000042.1 <> na Primary Assembly 101902 na NA18620#2#h2tg000091l unplaced-scaffold na na JBHIJV010000043.1 <> na Primary Assembly 206251 na NA18620#2#h2tg000093l unplaced-scaffold na na JBHIJV010000044.1 <> na Primary Assembly 66397 na NA18620#2#h2tg000098l unplaced-scaffold na na JBHIJV010000045.1 <> na Primary Assembly 208470 na NA18620#2#h2tg000100l unplaced-scaffold na na JBHIJV010000046.1 <> na Primary Assembly 338478 na NA18620#2#h2tg000101l unplaced-scaffold na na JBHIJV010000047.1 <> na Primary Assembly 127634 na NA18620#2#h2tg000102l unplaced-scaffold na na JBHIJV010000048.1 <> na Primary Assembly 116179 na NA18620#2#h2tg000105l unplaced-scaffold na na JBHIJV010000049.1 <> na Primary Assembly 333054 na NA18620#2#h2tg000107l unplaced-scaffold na na JBHIJV010000050.1 <> na Primary Assembly 180088 na NA18620#2#h2tg000113l unplaced-scaffold na na JBHIJV010000051.1 <> na Primary Assembly 74043 na NA18620#2#h2tg000115l unplaced-scaffold na na JBHIJV010000052.1 <> na Primary Assembly 109709 na NA18620#2#h2tg000120l unplaced-scaffold na na JBHIJV010000053.1 <> na Primary Assembly 94169 na NA18620#2#h2tg000127l unplaced-scaffold na na JBHIJV010000054.1 <> na Primary Assembly 124510 na NA18620#2#h2tg000129l unplaced-scaffold na na JBHIJV010000055.1 <> na Primary Assembly 172318 na NA18620#2#h2tg000135l unplaced-scaffold na na JBHIJV010000056.1 <> na Primary Assembly 143857 na NA18620#2#h2tg000136l unplaced-scaffold na na JBHIJV010000057.1 <> na Primary Assembly 57311 na NA18620#2#h2tg000142l unplaced-scaffold na na JBHIJV010000058.1 <> na Primary Assembly 54717 na NA18620#2#h2tg000148l unplaced-scaffold na na JBHIJV010000059.1 <> na Primary Assembly 273994 na NA18620#2#h2tg000152l unplaced-scaffold na na JBHIJV010000060.1 <> na Primary Assembly 62805 na NA18620#2#h2tg000005l unplaced-scaffold na na JBHIJV010000063.1 <> na Primary Assembly 61263035 na NA18620#2#h2tg000007l unplaced-scaffold na na JBHIJV010000064.1 <> na Primary Assembly 60041990 na NA18620#2#h2tg000010l unplaced-scaffold na na JBHIJV010000065.1 <> na Primary Assembly 97908731 na NA18620#2#h2tg000016l unplaced-scaffold na na JBHIJV010000067.1 <> na Primary Assembly 160031269 na NA18620#2#h2tg000017l unplaced-scaffold na na JBHIJV010000068.1 <> na Primary Assembly 57534600 na NA18620#2#h2tg000019l unplaced-scaffold na na JBHIJV010000069.1 <> na Primary Assembly 90742130 na NA18620#2#h2tg000021l unplaced-scaffold na na JBHIJV010000071.1 <> na Primary Assembly 79044942 na NA18620#2#h2tg000028l unplaced-scaffold na na JBHIJV010000073.1 <> na Primary Assembly 49390667 na NA18620#2#h2tg000031l unplaced-scaffold na na JBHIJV010000074.1 <> na Primary Assembly 252407 na NA18620#2#h2tg000035l unplaced-scaffold na na JBHIJV010000075.1 <> na Primary Assembly 4096665 na NA18620#2#h2tg000039l unplaced-scaffold na na JBHIJV010000076.1 <> na Primary Assembly 3731917 na NA18620#2#h2tg000040l unplaced-scaffold na na JBHIJV010000077.1 <> na Primary Assembly 222960 na NA18620#2#h2tg000041l unplaced-scaffold na na JBHIJV010000078.1 <> na Primary Assembly 7818362 na NA18620#2#h2tg000042l unplaced-scaffold na na JBHIJV010000079.1 <> na Primary Assembly 6777090 na NA18620#2#h2tg000043l unplaced-scaffold na na JBHIJV010000080.1 <> na Primary Assembly 2566892 na NA18620#2#h2tg000044l unplaced-scaffold na na JBHIJV010000081.1 <> na Primary Assembly 3836663 na NA18620#2#h2tg000046l unplaced-scaffold na na JBHIJV010000082.1 <> na Primary Assembly 167300 na NA18620#2#h2tg000049l unplaced-scaffold na na JBHIJV010000083.1 <> na Primary Assembly 131518 na NA18620#2#h2tg000053l unplaced-scaffold na na JBHIJV010000084.1 <> na Primary Assembly 51443 na NA18620#2#h2tg000055l unplaced-scaffold na na JBHIJV010000085.1 <> na Primary Assembly 152475 na NA18620#2#h2tg000060l unplaced-scaffold na na JBHIJV010000086.1 <> na Primary Assembly 189011 na NA18620#2#h2tg000061l unplaced-scaffold na na JBHIJV010000087.1 <> na Primary Assembly 112521 na NA18620#2#h2tg000063l unplaced-scaffold na na JBHIJV010000088.1 <> na Primary Assembly 183760 na NA18620#2#h2tg000064l unplaced-scaffold na na JBHIJV010000089.1 <> na Primary Assembly 321012 na NA18620#2#h2tg000068l unplaced-scaffold na na JBHIJV010000090.1 <> na Primary Assembly 110202 na NA18620#2#h2tg000071l unplaced-scaffold na na JBHIJV010000091.1 <> na Primary Assembly 2893652 na NA18620#2#h2tg000077l unplaced-scaffold na na JBHIJV010000092.1 <> na Primary Assembly 335596 na NA18620#2#h2tg000087l unplaced-scaffold na na JBHIJV010000093.1 <> na Primary Assembly 201162 na NA18620#2#h2tg000088l unplaced-scaffold na na JBHIJV010000094.1 <> na Primary Assembly 106213 na NA18620#2#h2tg000094l unplaced-scaffold na na JBHIJV010000095.1 <> na Primary Assembly 97027 na NA18620#2#h2tg000106l unplaced-scaffold na na JBHIJV010000096.1 <> na Primary Assembly 122889 na NA18620#2#h2tg000108l unplaced-scaffold na na JBHIJV010000097.1 <> na Primary Assembly 104706 na NA18620#2#h2tg000109l unplaced-scaffold na na JBHIJV010000098.1 <> na Primary Assembly 69113 na NA18620#2#h2tg000110l unplaced-scaffold na na JBHIJV010000099.1 <> na Primary Assembly 74503 na NA18620#2#h2tg000111l unplaced-scaffold na na JBHIJV010000100.1 <> na Primary Assembly 150074 na NA18620#2#h2tg000112l unplaced-scaffold na na JBHIJV010000101.1 <> na Primary Assembly 145474 na NA18620#2#h2tg000116l unplaced-scaffold na na JBHIJV010000102.1 <> na Primary Assembly 214165 na NA18620#2#h2tg000119l unplaced-scaffold na na JBHIJV010000103.1 <> na Primary Assembly 129249 na NA18620#2#h2tg000122l unplaced-scaffold na na JBHIJV010000104.1 <> na Primary Assembly 89716 na NA18620#2#h2tg000124l unplaced-scaffold na na JBHIJV010000105.1 <> na Primary Assembly 194676 na NA18620#2#h2tg000128l unplaced-scaffold na na JBHIJV010000106.1 <> na Primary Assembly 122005 na NA18620#2#h2tg000130l unplaced-scaffold na na JBHIJV010000107.1 <> na Primary Assembly 52809 na NA18620#2#h2tg000133l unplaced-scaffold na na JBHIJV010000108.1 <> na Primary Assembly 65959 na NA18620#2#h2tg000141l unplaced-scaffold na na JBHIJV010000109.1 <> na Primary Assembly 58581 na NA18620#2#h2tg000153l unplaced-scaffold na na JBHIJV010000110.1 <> na Primary Assembly 110182 na NA18620#2#atg000016l_rotated unlocalized-scaffold MT Mitochondrion JBHIJV010000111.1 <> na non-nuclear 16565 na