# Assembly name: HG00544_pat_hprc_f2 # Organism name: Homo sapiens (human) # Isolate: HG00544 # Sex: female # Taxid: 9606 # BioSample: SAMN26237491 # BioProject: PRJNA1156986 # Submitter: UCSC Genomics Institute # Date: 2024-09-20 # Assembly type: haploid (paternal haplotype of diploid) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JBHIIM01 # Assembly method: Hifiasm v. 0.19.9 # Expected final version: no # Genome coverage: 67x # Sequencing technology: PacBio; Oxford Nanopore # GenBank assembly accession: GCA_042076675.1 # Linked assembly: GCA_042076565.1 (maternal haplotype of diploid) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_042076725.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name HG00544#1#h1tg000006l assembled-molecule 1 Chromosome CM089370.1 <> na Primary Assembly 244489225 na HG00544#1#h1tg000009l assembled-molecule 3 Chromosome CM089371.1 <> na Primary Assembly 202147372 na HG00544#1#h1tg000001l assembled-molecule 5 Chromosome CM089372.1 <> na Primary Assembly 182803223 na HG00544#1#h1tg000008l assembled-molecule 6 Chromosome CM089373.1 <> na Primary Assembly 172180310 na HG00544#1#h1tg000004l assembled-molecule 8 Chromosome CM089374.1 <> na Primary Assembly 146002039 na HG00544#1#h1tg000003l assembled-molecule 9 Chromosome CM089375.1 <> na Primary Assembly 137000845 na HG00544#1#h1tg000014l assembled-molecule 11 Chromosome CM089376.1 <> na Primary Assembly 137486831 na HG00544#1#h1tg000023l assembled-molecule 12 Chromosome CM089377.1 <> na Primary Assembly 133295542 na HG00544#1#h1tg000018l assembled-molecule 16 Chromosome CM089378.1 <> na Primary Assembly 83699332 na HG00544#1#h1tg000024l assembled-molecule 19 Chromosome CM089379.1 <> na Primary Assembly 61072110 na HG00544#1#h1tg000019l assembled-molecule 21 Chromosome CM089380.1 <> na Primary Assembly 42907728 na HG00544#1#h1tg000022l assembled-molecule 22 Chromosome CM089381.1 <> na Primary Assembly 48607338 na HG00544#1#h1tg000016l assembled-molecule X Chromosome CM089382.1 <> na Primary Assembly 153995862 na HG00544#1#h1tg000012l unplaced-scaffold na na JBHIIM010000005.1 <> na Primary Assembly 159630255 na HG00544#1#h1tg000013l unplaced-scaffold na na JBHIIM010000006.1 <> na Primary Assembly 104394352 na HG00544#1#h1tg000017l unplaced-scaffold na na JBHIIM010000008.1 <> na Primary Assembly 93122144 na HG00544#1#h1tg000026l unplaced-scaffold na na JBHIIM010000010.1 <> na Primary Assembly 41842439 na HG00544#1#h1tg000027l unplaced-scaffold na na JBHIIM010000011.1 <> na Primary Assembly 35157840 na HG00544#1#h1tg000028l unplaced-scaffold na na JBHIIM010000012.1 <> na Primary Assembly 25673765 na HG00544#1#h1tg000030l unplaced-scaffold na na JBHIIM010000013.1 <> na Primary Assembly 183134 na HG00544#1#h1tg000033l unplaced-scaffold na na JBHIIM010000014.1 <> na Primary Assembly 1131418 na HG00544#1#h1tg000036l unplaced-scaffold na na JBHIIM010000015.1 <> na Primary Assembly 2546634 na HG00544#1#h1tg000038l unplaced-scaffold na na JBHIIM010000016.1 <> na Primary Assembly 110523 na HG00544#1#h1tg000042l unplaced-scaffold na na JBHIIM010000017.1 <> na Primary Assembly 901263 na HG00544#1#h1tg000043l unplaced-scaffold na na JBHIIM010000018.1 <> na Primary Assembly 119405 na HG00544#1#h1tg000044l unplaced-scaffold na na JBHIIM010000019.1 <> na Primary Assembly 202539 na HG00544#1#h1tg000046l unplaced-scaffold na na JBHIIM010000020.1 <> na Primary Assembly 255303 na HG00544#1#h1tg000047l unplaced-scaffold na na JBHIIM010000021.1 <> na Primary Assembly 1024975 na HG00544#1#h1tg000049l unplaced-scaffold na na JBHIIM010000022.1 <> na Primary Assembly 97154 na HG00544#1#h1tg000053l unplaced-scaffold na na JBHIIM010000023.1 <> na Primary Assembly 160305 na HG00544#1#h1tg000058l unplaced-scaffold na na JBHIIM010000024.1 <> na Primary Assembly 266039 na HG00544#1#h1tg000065l unplaced-scaffold na na JBHIIM010000025.1 <> na Primary Assembly 73072 na HG00544#1#h1tg000067l unplaced-scaffold na na JBHIIM010000026.1 <> na Primary Assembly 56436 na HG00544#1#h1tg000002l unplaced-scaffold na na JBHIIM010000028.1 <> na Primary Assembly 135120437 na HG00544#1#h1tg000005l unplaced-scaffold na na JBHIIM010000029.1 <> na Primary Assembly 141486743 na HG00544#1#h1tg000007l unplaced-scaffold na na JBHIIM010000030.1 <> na Primary Assembly 37817899 na HG00544#1#h1tg000010l unplaced-scaffold na na JBHIIM010000032.1 <> na Primary Assembly 241917853 na HG00544#1#h1tg000011l unplaced-scaffold na na JBHIIM010000033.1 <> na Primary Assembly 51781492 na HG00544#1#h1tg000015l unplaced-scaffold na na JBHIIM010000035.1 <> na Primary Assembly 59220685 na HG00544#1#h1tg000020l unplaced-scaffold na na JBHIIM010000037.1 <> na Primary Assembly 95836982 na HG00544#1#h1tg000021l unplaced-scaffold na na JBHIIM010000038.1 <> na Primary Assembly 27036404 na HG00544#1#h1tg000025l unplaced-scaffold na na JBHIIM010000042.1 <> na Primary Assembly 3423194 na HG00544#1#h1tg000029l unplaced-scaffold na na JBHIIM010000043.1 <> na Primary Assembly 2927472 na HG00544#1#h1tg000031l unplaced-scaffold na na JBHIIM010000044.1 <> na Primary Assembly 712667 na HG00544#1#h1tg000032l unplaced-scaffold na na JBHIIM010000045.1 <> na Primary Assembly 274505 na HG00544#1#h1tg000034l unplaced-scaffold na na JBHIIM010000046.1 <> na Primary Assembly 438409 na HG00544#1#h1tg000037l unplaced-scaffold na na JBHIIM010000047.1 <> na Primary Assembly 256745 na HG00544#1#h1tg000040l unplaced-scaffold na na JBHIIM010000048.1 <> na Primary Assembly 296679 na HG00544#1#h1tg000045l unplaced-scaffold na na JBHIIM010000049.1 <> na Primary Assembly 101427 na HG00544#1#h1tg000050l unplaced-scaffold na na JBHIIM010000050.1 <> na Primary Assembly 68442 na HG00544#1#h1tg000052l unplaced-scaffold na na JBHIIM010000051.1 <> na Primary Assembly 172239 na HG00544#1#h1tg000055l unplaced-scaffold na na JBHIIM010000052.1 <> na Primary Assembly 172264 na HG00544#1#h1tg000056l unplaced-scaffold na na JBHIIM010000053.1 <> na Primary Assembly 62064 na HG00544#1#h1tg000057l unplaced-scaffold na na JBHIIM010000054.1 <> na Primary Assembly 69276 na HG00544#1#h1tg000059l unplaced-scaffold na na JBHIIM010000055.1 <> na Primary Assembly 56690 na HG00544#1#h1tg000060l unplaced-scaffold na na JBHIIM010000056.1 <> na Primary Assembly 479246 na HG00544#1#h1tg000063l unplaced-scaffold na na JBHIIM010000057.1 <> na Primary Assembly 152571 na HG00544#1#h1tg000066l unplaced-scaffold na na JBHIIM010000058.1 <> na Primary Assembly 69161 na HG00544#1#h1tg000069l unplaced-scaffold na na JBHIIM010000059.1 <> na Primary Assembly 164147 na HG00544#1#h1tg000074l unplaced-scaffold na na JBHIIM010000060.1 <> na Primary Assembly 58793 na HG00544#1#h1tg000075l unplaced-scaffold na na JBHIIM010000061.1 <> na Primary Assembly 50261 na