# Assembly name: HG02071_mat_hprc_f2 # Organism name: Homo sapiens (human) # Isolate: HG02071 # Sex: male # Taxid: 9606 # BioSample: SAMN26267380 # BioProject: PRJNA1157240 # Submitter: UCSC Genomics Institute # Date: 2024-09-20 # Assembly type: haploid (maternal haplotype of diploid) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JBHIGJ01 # Assembly method: Hifiasm v. 0.19.9 # Expected final version: no # Genome coverage: 70x # Sequencing technology: PacBio; Oxford Nanopore # GenBank assembly accession: GCA_042036105.1 # Linked assembly: GCA_042036435.1 (paternal haplotype of diploid) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_042036195.1 Primary Assembly ## GCA_042036215.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name HG02071#2#h2tg000016l assembled-molecule 2 Chromosome CM088280.1 <> na Primary Assembly 242471574 na HG02071#2#h2tg000025l assembled-molecule 3 Chromosome CM088281.1 <> na Primary Assembly 200866361 na HG02071#2#h2tg000006l assembled-molecule 5 Chromosome CM088282.1 <> na Primary Assembly 183862271 na HG02071#2#h2tg000019l assembled-molecule 6 Chromosome CM088283.1 <> na Primary Assembly 173650703 na HG02071#2#h2tg000022l assembled-molecule 7 Chromosome CM088284.1 <> na Primary Assembly 161477993 na HG02071#2#h2tg000017l assembled-molecule 8 Chromosome CM088285.1 <> na Primary Assembly 145946967 na HG02071#2#h2tg000008l assembled-molecule 9 Chromosome CM088286.1 <> na Primary Assembly 133734774 na HG02071#2#h2tg000001l assembled-molecule 10 Chromosome CM088287.1 <> na Primary Assembly 135020942 na HG02071#2#h2tg000020l assembled-molecule 11 Chromosome CM088288.1 <> na Primary Assembly 134050763 na HG02071#2#h2tg000005l assembled-molecule 12 Chromosome CM088289.1 <> na Primary Assembly 134789986 na HG02071#2#h2tg000003l assembled-molecule 17 Chromosome CM088290.1 <> na Primary Assembly 83604117 na HG02071#2#h2tg000004l assembled-molecule 19 Chromosome CM088291.1 <> na Primary Assembly 61924450 na HG02071#2#h2tg000021l assembled-molecule 20 Chromosome CM088292.1 <> na Primary Assembly 66936607 na HG02071#2#h2tg000009l assembled-molecule X Chromosome CM088293.1 <> na Primary Assembly 154093426 na HG02071#2#h2tg000007l unplaced-scaffold na na JBHIGJ010000003.1 <> na Primary Assembly 94597929 na HG02071#2#h2tg000010l unplaced-scaffold na na JBHIGJ010000005.1 <> na Primary Assembly 94943140 na HG02071#2#h2tg000013l unplaced-scaffold na na JBHIGJ010000006.1 <> na Primary Assembly 51573838 na HG02071#2#h2tg000014l unplaced-scaffold na na JBHIGJ010000007.1 <> na Primary Assembly 44964115 na HG02071#2#h2tg000015l unplaced-scaffold na na JBHIGJ010000008.1 <> na Primary Assembly 102866834 na HG02071#2#h2tg000018l unplaced-scaffold na na JBHIGJ010000011.1 <> na Primary Assembly 110477072 na HG02071#2#h2tg000023l unplaced-scaffold na na JBHIGJ010000014.1 <> na Primary Assembly 61322301 na HG02071#2#h2tg000029l unplaced-scaffold na na JBHIGJ010000015.1 <> na Primary Assembly 71601 na HG02071#2#h2tg000030l unplaced-scaffold na na JBHIGJ010000016.1 <> na Primary Assembly 213825 na HG02071#2#h2tg000033l unplaced-scaffold na na JBHIGJ010000017.1 <> na Primary Assembly 643221 na HG02071#2#h2tg000039l unplaced-scaffold na na JBHIGJ010000018.1 <> na Primary Assembly 2031219 na HG02071#2#h2tg000041l unplaced-scaffold na na JBHIGJ010000019.1 <> na Primary Assembly 241741 na HG02071#2#h2tg000042l unplaced-scaffold na na JBHIGJ010000020.1 <> na Primary Assembly 1473372 na HG02071#2#h2tg000043l unplaced-scaffold na na JBHIGJ010000021.1 <> na Primary Assembly 166290 na HG02071#2#h2tg000044l unplaced-scaffold na na JBHIGJ010000022.1 <> na Primary Assembly 191253 na HG02071#2#h2tg000047l unplaced-scaffold na na JBHIGJ010000023.1 <> na Primary Assembly 2523795 na HG02071#2#h2tg000048l unplaced-scaffold na na JBHIGJ010000024.1 <> na Primary Assembly 384315 na HG02071#2#h2tg000050l unplaced-scaffold na na JBHIGJ010000025.1 <> na Primary Assembly 968886 na HG02071#2#h2tg000051l unplaced-scaffold na na JBHIGJ010000026.1 <> na Primary Assembly 176861 na HG02071#2#h2tg000054l unplaced-scaffold na na JBHIGJ010000027.1 <> na Primary Assembly 364067 na HG02071#2#h2tg000055l unplaced-scaffold na na JBHIGJ010000028.1 <> na Primary Assembly 438839 na HG02071#2#h2tg000061l unplaced-scaffold na na JBHIGJ010000029.1 <> na Primary Assembly 565987 na HG02071#2#h2tg000067l unplaced-scaffold na na JBHIGJ010000030.1 <> na Primary Assembly 1423683 na HG02071#2#h2tg000079l unplaced-scaffold na na JBHIGJ010000031.1 <> na Primary Assembly 82823 na HG02071#2#h2tg000080l unplaced-scaffold na na JBHIGJ010000032.1 <> na Primary Assembly 81862 na HG02071#2#h2tg000082l unplaced-scaffold na na JBHIGJ010000033.1 <> na Primary Assembly 154843 na HG02071#2#h2tg000084l unplaced-scaffold na na JBHIGJ010000034.1 <> na Primary Assembly 224411 na HG02071#2#h2tg000090l unplaced-scaffold na na JBHIGJ010000035.1 <> na Primary Assembly 120288 na HG02071#2#h2tg000092l unplaced-scaffold na na JBHIGJ010000036.1 <> na Primary Assembly 163965 na HG02071#2#h2tg000093l unplaced-scaffold na na JBHIGJ010000037.1 <> na Primary Assembly 87467 na HG02071#2#h2tg000095l unplaced-scaffold na na JBHIGJ010000038.1 <> na Primary Assembly 171781 na HG02071#2#h2tg000099l unplaced-scaffold na na JBHIGJ010000039.1 <> na Primary Assembly 89883 na HG02071#2#h2tg000101l unplaced-scaffold na na JBHIGJ010000040.1 <> na Primary Assembly 54591 na HG02071#2#h2tg000114l unplaced-scaffold na na JBHIGJ010000041.1 <> na Primary Assembly 59826 na HG02071#2#h2tg000002l unplaced-scaffold na na JBHIGJ010000042.1 <> na Primary Assembly 131757626 na HG02071#2#h2tg000011l unplaced-scaffold na na JBHIGJ010000047.1 <> na Primary Assembly 46353610 na HG02071#2#h2tg000012l unplaced-scaffold na na JBHIGJ010000048.1 <> na Primary Assembly 140472655 na HG02071#2#h2tg000024l unplaced-scaffold na na JBHIGJ010000051.1 <> na Primary Assembly 38359190 na HG02071#2#h2tg000026l unplaced-scaffold na na JBHIGJ010000053.1 <> na Primary Assembly 604955 na HG02071#2#h2tg000027l unplaced-scaffold na na JBHIGJ010000054.1 <> na Primary Assembly 18994938 na HG02071#2#h2tg000028l unplaced-scaffold na na JBHIGJ010000055.1 <> na Primary Assembly 45273886 na HG02071#2#h2tg000031l unplaced-scaffold na na JBHIGJ010000056.1 <> na Primary Assembly 1683934 na HG02071#2#h2tg000032l unplaced-scaffold na na JBHIGJ010000057.1 <> na Primary Assembly 2159997 na HG02071#2#h2tg000034l unplaced-scaffold na na JBHIGJ010000058.1 <> na Primary Assembly 426745 na HG02071#2#h2tg000035l unplaced-scaffold na na JBHIGJ010000059.1 <> na Primary Assembly 837763 na HG02071#2#h2tg000036l unplaced-scaffold na na JBHIGJ010000060.1 <> na Primary Assembly 2099390 na HG02071#2#h2tg000037l unplaced-scaffold na na JBHIGJ010000061.1 <> na Primary Assembly 2489483 na HG02071#2#h2tg000038l unplaced-scaffold na na JBHIGJ010000062.1 <> na Primary Assembly 3405972 na HG02071#2#h2tg000040l unplaced-scaffold na na JBHIGJ010000063.1 <> na Primary Assembly 126618 na HG02071#2#h2tg000045l unplaced-scaffold na na JBHIGJ010000064.1 <> na Primary Assembly 1587727 na HG02071#2#h2tg000046l unplaced-scaffold na na JBHIGJ010000065.1 <> na Primary Assembly 60864 na HG02071#2#h2tg000049l unplaced-scaffold na na JBHIGJ010000066.1 <> na Primary Assembly 464930 na HG02071#2#h2tg000052l unplaced-scaffold na na JBHIGJ010000067.1 <> na Primary Assembly 51672 na HG02071#2#h2tg000053l unplaced-scaffold na na JBHIGJ010000068.1 <> na Primary Assembly 2253138 na HG02071#2#h2tg000056l unplaced-scaffold na na JBHIGJ010000069.1 <> na Primary Assembly 486647 na HG02071#2#h2tg000057l unplaced-scaffold na na JBHIGJ010000070.1 <> na Primary Assembly 52578 na HG02071#2#h2tg000058l unplaced-scaffold na na JBHIGJ010000071.1 <> na Primary Assembly 793776 na HG02071#2#h2tg000060l unplaced-scaffold na na JBHIGJ010000072.1 <> na Primary Assembly 80598 na HG02071#2#h2tg000062l unplaced-scaffold na na JBHIGJ010000073.1 <> na Primary Assembly 118878 na HG02071#2#h2tg000063l unplaced-scaffold na na JBHIGJ010000074.1 <> na Primary Assembly 225740 na HG02071#2#h2tg000064l unplaced-scaffold na na JBHIGJ010000075.1 <> na Primary Assembly 206585 na HG02071#2#h2tg000065l unplaced-scaffold na na JBHIGJ010000076.1 <> na Primary Assembly 520469 na HG02071#2#h2tg000066l unplaced-scaffold na na JBHIGJ010000077.1 <> na Primary Assembly 286894 na HG02071#2#h2tg000068l unplaced-scaffold na na JBHIGJ010000078.1 <> na Primary Assembly 83234 na HG02071#2#h2tg000069l unplaced-scaffold na na JBHIGJ010000079.1 <> na Primary Assembly 147792 na HG02071#2#h2tg000070l unplaced-scaffold na na JBHIGJ010000080.1 <> na Primary Assembly 225918 na HG02071#2#h2tg000071l unplaced-scaffold na na JBHIGJ010000081.1 <> na Primary Assembly 240472 na HG02071#2#h2tg000072l unplaced-scaffold na na JBHIGJ010000082.1 <> na Primary Assembly 54456 na HG02071#2#h2tg000073l unplaced-scaffold na na JBHIGJ010000083.1 <> na Primary Assembly 112909 na HG02071#2#h2tg000074l unplaced-scaffold na na JBHIGJ010000084.1 <> na Primary Assembly 82383 na HG02071#2#h2tg000076l unplaced-scaffold na na JBHIGJ010000085.1 <> na Primary Assembly 134923 na HG02071#2#h2tg000077l unplaced-scaffold na na JBHIGJ010000086.1 <> na Primary Assembly 54608 na HG02071#2#h2tg000078l unplaced-scaffold na na JBHIGJ010000087.1 <> na Primary Assembly 157451 na HG02071#2#h2tg000083l unplaced-scaffold na na JBHIGJ010000088.1 <> na Primary Assembly 118524 na HG02071#2#h2tg000085l unplaced-scaffold na na JBHIGJ010000089.1 <> na Primary Assembly 124291 na HG02071#2#h2tg000086l unplaced-scaffold na na JBHIGJ010000090.1 <> na Primary Assembly 224778 na HG02071#2#h2tg000089l unplaced-scaffold na na JBHIGJ010000091.1 <> na Primary Assembly 112945 na HG02071#2#h2tg000096l unplaced-scaffold na na JBHIGJ010000092.1 <> na Primary Assembly 154464 na HG02071#2#h2tg000100l unplaced-scaffold na na JBHIGJ010000093.1 <> na Primary Assembly 199868 na HG02071#2#h2tg000102l unplaced-scaffold na na JBHIGJ010000094.1 <> na Primary Assembly 108152 na HG02071#2#h2tg000103l unplaced-scaffold na na JBHIGJ010000095.1 <> na Primary Assembly 110110 na HG02071#2#h2tg000104l unplaced-scaffold na na JBHIGJ010000096.1 <> na Primary Assembly 63418 na HG02071#2#h2tg000105l unplaced-scaffold na na JBHIGJ010000097.1 <> na Primary Assembly 97644 na HG02071#2#ptg000001l_rc_rotated unlocalized-scaffold MT Mitochondrion JBHIGJ010000098.1 <> na non-nuclear 16559 na