# Assembly name: HG00099_hap1_hprc_f2 # Organism name: Homo sapiens (human) # Isolate: HG00099 # Sex: female # Taxid: 9606 # BioSample: SAMN33758778 # BioProject: PRJNA1156741 # Submitter: UCSC Genomics Institute # Date: 2024-09-19 # Assembly type: haploid (haplotype 1) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JBHDWO01 # Assembly method: Hifiasm v. 0.19.9 # Expected final version: no # Genome coverage: 74x # Sequencing technology: PacBio; Oxford Nanopore # GenBank assembly accession: GCA_042032525.1 # Linked assembly: GCA_042031945.1 (haplotype 2) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_042032575.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name HG00099#1#h1tg000014l assembled-molecule 2 Chromosome CM087317.1 <> na Primary Assembly 242530879 na HG00099#1#h1tg000019l assembled-molecule 5 Chromosome CM087318.1 <> na Primary Assembly 181236516 na HG00099#1#h1tg000010l assembled-molecule 7 Chromosome CM087319.1 <> na Primary Assembly 160818139 na HG00099#1#h1tg000017l assembled-molecule 8 Chromosome CM087320.1 <> na Primary Assembly 146545784 na HG00099#1#h1tg000002l assembled-molecule 10 Chromosome CM087321.1 <> na Primary Assembly 134492155 na HG00099#1#h1tg000004l assembled-molecule 11 Chromosome CM087322.1 <> na Primary Assembly 136758242 na HG00099#1#h1tg000009l assembled-molecule 12 Chromosome CM087323.1 <> na Primary Assembly 133645319 na HG00099#1#h1tg000024l assembled-molecule 16 Chromosome CM087324.1 <> na Primary Assembly 93416940 na HG00099#1#h1tg000027l assembled-molecule 18 Chromosome CM087325.1 <> na Primary Assembly 80476601 na HG00099#1#h1tg000013l assembled-molecule 19 Chromosome CM087326.1 <> na Primary Assembly 62336960 na HG00099#1#h1tg000026l assembled-molecule 20 Chromosome CM087327.1 <> na Primary Assembly 66457197 na HG00099#1#h1tg000001l unplaced-scaffold na na JBHDWO010000001.1 <> na Primary Assembly 191252469 na HG00099#1#h1tg000005l unplaced-scaffold na na JBHDWO010000003.1 <> na Primary Assembly 136885937 na HG00099#1#h1tg000006l unplaced-scaffold na na JBHDWO010000004.1 <> na Primary Assembly 99444006 na HG00099#1#h1tg000008l unplaced-scaffold na na JBHDWO010000005.1 <> na Primary Assembly 133107800 na HG00099#1#h1tg000018l unplaced-scaffold na na JBHDWO010000010.1 <> na Primary Assembly 35331129 na HG00099#1#h1tg000020l unplaced-scaffold na na JBHDWO010000012.1 <> na Primary Assembly 97081450 na HG00099#1#h1tg000021l unplaced-scaffold na na JBHDWO010000013.1 <> na Primary Assembly 94682723 na HG00099#1#h1tg000022l unplaced-scaffold na na JBHDWO010000014.1 <> na Primary Assembly 51497366 na HG00099#1#h1tg000023l unplaced-scaffold na na JBHDWO010000015.1 <> na Primary Assembly 10707635 na HG00099#1#h1tg000028l unplaced-scaffold na na JBHDWO010000017.1 <> na Primary Assembly 45649994 na HG00099#1#h1tg000030l unplaced-scaffold na na JBHDWO010000018.1 <> na Primary Assembly 482445 na HG00099#1#h1tg000033l unplaced-scaffold na na JBHDWO010000019.1 <> na Primary Assembly 4044388 na HG00099#1#h1tg000035l unplaced-scaffold na na JBHDWO010000020.1 <> na Primary Assembly 313800 na HG00099#1#h1tg000041l unplaced-scaffold na na JBHDWO010000021.1 <> na Primary Assembly 1228419 na HG00099#1#h1tg000043l unplaced-scaffold na na JBHDWO010000022.1 <> na Primary Assembly 759280 na HG00099#1#h1tg000046l unplaced-scaffold na na JBHDWO010000023.1 <> na Primary Assembly 404549 na HG00099#1#h1tg000050l unplaced-scaffold na na JBHDWO010000024.1 <> na Primary Assembly 109115 na HG00099#1#h1tg000051l unplaced-scaffold na na JBHDWO010000025.1 <> na Primary Assembly 149323 na HG00099#1#h1tg000053l unplaced-scaffold na na JBHDWO010000026.1 <> na Primary Assembly 143663 na HG00099#1#h1tg000054l unplaced-scaffold na na JBHDWO010000027.1 <> na Primary Assembly 854901 na HG00099#1#h1tg000061l unplaced-scaffold na na JBHDWO010000028.1 <> na Primary Assembly 150347 na HG00099#1#h1tg000068l unplaced-scaffold na na JBHDWO010000029.1 <> na Primary Assembly 131703 na HG00099#1#h1tg000072l unplaced-scaffold na na JBHDWO010000030.1 <> na Primary Assembly 96668 na HG00099#1#h1tg000075l unplaced-scaffold na na JBHDWO010000031.1 <> na Primary Assembly 457290 na HG00099#1#h1tg000076l unplaced-scaffold na na JBHDWO010000032.1 <> na Primary Assembly 154041 na HG00099#1#h1tg000077l unplaced-scaffold na na JBHDWO010000033.1 <> na Primary Assembly 121888 na HG00099#1#h1tg000079l unplaced-scaffold na na JBHDWO010000034.1 <> na Primary Assembly 197873 na HG00099#1#h1tg000080l unplaced-scaffold na na JBHDWO010000035.1 <> na Primary Assembly 145171 na HG00099#1#h1tg000081l unplaced-scaffold na na JBHDWO010000036.1 <> na Primary Assembly 289064 na HG00099#1#h1tg000082l unplaced-scaffold na na JBHDWO010000037.1 <> na Primary Assembly 114404 na HG00099#1#h1tg000089l unplaced-scaffold na na JBHDWO010000038.1 <> na Primary Assembly 287473 na HG00099#1#h1tg000091l unplaced-scaffold na na JBHDWO010000039.1 <> na Primary Assembly 82410 na HG00099#1#h1tg000093l unplaced-scaffold na na JBHDWO010000040.1 <> na Primary Assembly 73852 na HG00099#1#h1tg000095l unplaced-scaffold na na JBHDWO010000041.1 <> na Primary Assembly 171290 na HG00099#1#h1tg000098l unplaced-scaffold na na JBHDWO010000042.1 <> na Primary Assembly 172123 na HG00099#1#h1tg000103l unplaced-scaffold na na JBHDWO010000043.1 <> na Primary Assembly 92360 na HG00099#1#h1tg000108l unplaced-scaffold na na JBHDWO010000044.1 <> na Primary Assembly 106254 na HG00099#1#h1tg000109l unplaced-scaffold na na JBHDWO010000045.1 <> na Primary Assembly 89757 na HG00099#1#h1tg000114l unplaced-scaffold na na JBHDWO010000046.1 <> na Primary Assembly 52718 na HG00099#1#h1tg000119l unplaced-scaffold na na JBHDWO010000047.1 <> na Primary Assembly 92755 na HG00099#1#h1tg000121l unplaced-scaffold na na JBHDWO010000048.1 <> na Primary Assembly 104236 na HG00099#1#h1tg000122l unplaced-scaffold na na JBHDWO010000049.1 <> na Primary Assembly 59783 na HG00099#1#h1tg000128l unplaced-scaffold na na JBHDWO010000050.1 <> na Primary Assembly 204585 na HG00099#1#h1tg000130l unplaced-scaffold na na JBHDWO010000051.1 <> na Primary Assembly 100484 na HG00099#1#h1tg000133l unplaced-scaffold na na JBHDWO010000052.1 <> na Primary Assembly 67954 na HG00099#1#h1tg000134l unplaced-scaffold na na JBHDWO010000053.1 <> na Primary Assembly 77105 na HG00099#1#h1tg000136l unplaced-scaffold na na JBHDWO010000054.1 <> na Primary Assembly 52109 na HG00099#1#h1tg000139l unplaced-scaffold na na JBHDWO010000055.1 <> na Primary Assembly 52663 na HG00099#1#h1tg000141l unplaced-scaffold na na JBHDWO010000056.1 <> na Primary Assembly 89893 na HG00099#1#h1tg000003l unplaced-scaffold na na JBHDWO010000057.1 <> na Primary Assembly 161105322 na HG00099#1#h1tg000007l unplaced-scaffold na na JBHDWO010000059.1 <> na Primary Assembly 113884461 na HG00099#1#h1tg000011l unplaced-scaffold na na JBHDWO010000061.1 <> na Primary Assembly 44914371 na HG00099#1#h1tg000012l unplaced-scaffold na na JBHDWO010000062.1 <> na Primary Assembly 111032183 na HG00099#1#h1tg000015l unplaced-scaffold na na JBHDWO010000063.1 <> na Primary Assembly 92534286 na HG00099#1#h1tg000016l unplaced-scaffold na na JBHDWO010000064.1 <> na Primary Assembly 104199049 na HG00099#1#h1tg000025l unplaced-scaffold na na JBHDWO010000066.1 <> na Primary Assembly 38369653 na HG00099#1#h1tg000029l unplaced-scaffold na na JBHDWO010000068.1 <> na Primary Assembly 199912 na HG00099#1#h1tg000031l unplaced-scaffold na na JBHDWO010000069.1 <> na Primary Assembly 2902115 na HG00099#1#h1tg000032l unplaced-scaffold na na JBHDWO010000070.1 <> na Primary Assembly 878190 na HG00099#1#h1tg000034l unplaced-scaffold na na JBHDWO010000071.1 <> na Primary Assembly 883280 na HG00099#1#h1tg000036l unplaced-scaffold na na JBHDWO010000072.1 <> na Primary Assembly 2997436 na HG00099#1#h1tg000037l unplaced-scaffold na na JBHDWO010000073.1 <> na Primary Assembly 762353 na HG00099#1#h1tg000038l unplaced-scaffold na na JBHDWO010000074.1 <> na Primary Assembly 3069218 na HG00099#1#h1tg000040l unplaced-scaffold na na JBHDWO010000075.1 <> na Primary Assembly 450110 na HG00099#1#h1tg000042l unplaced-scaffold na na JBHDWO010000076.1 <> na Primary Assembly 1286693 na HG00099#1#h1tg000044l unplaced-scaffold na na JBHDWO010000077.1 <> na Primary Assembly 327309 na HG00099#1#h1tg000045l unplaced-scaffold na na JBHDWO010000078.1 <> na Primary Assembly 1631433 na HG00099#1#h1tg000047l unplaced-scaffold na na JBHDWO010000079.1 <> na Primary Assembly 363684 na HG00099#1#h1tg000048l unplaced-scaffold na na JBHDWO010000080.1 <> na Primary Assembly 89076 na HG00099#1#h1tg000049l unplaced-scaffold na na JBHDWO010000081.1 <> na Primary Assembly 753111 na HG00099#1#h1tg000052l unplaced-scaffold na na JBHDWO010000082.1 <> na Primary Assembly 831881 na HG00099#1#h1tg000055l unplaced-scaffold na na JBHDWO010000083.1 <> na Primary Assembly 52886 na HG00099#1#h1tg000056l unplaced-scaffold na na JBHDWO010000084.1 <> na Primary Assembly 65206 na HG00099#1#h1tg000057l unplaced-scaffold na na JBHDWO010000085.1 <> na Primary Assembly 297023 na HG00099#1#h1tg000058l unplaced-scaffold na na JBHDWO010000086.1 <> na Primary Assembly 110974 na HG00099#1#h1tg000060l unplaced-scaffold na na JBHDWO010000087.1 <> na Primary Assembly 145590 na HG00099#1#h1tg000062l unplaced-scaffold na na JBHDWO010000088.1 <> na Primary Assembly 347443 na HG00099#1#h1tg000063l unplaced-scaffold na na JBHDWO010000089.1 <> na Primary Assembly 88785 na HG00099#1#h1tg000064l unplaced-scaffold na na JBHDWO010000090.1 <> na Primary Assembly 479186 na HG00099#1#h1tg000065l unplaced-scaffold na na JBHDWO010000091.1 <> na Primary Assembly 138221 na HG00099#1#h1tg000066l unplaced-scaffold na na JBHDWO010000092.1 <> na Primary Assembly 101010 na HG00099#1#h1tg000070l unplaced-scaffold na na JBHDWO010000093.1 <> na Primary Assembly 124361 na HG00099#1#h1tg000071l unplaced-scaffold na na JBHDWO010000094.1 <> na Primary Assembly 109038 na HG00099#1#h1tg000073l unplaced-scaffold na na JBHDWO010000095.1 <> na Primary Assembly 228210 na HG00099#1#h1tg000078l unplaced-scaffold na na JBHDWO010000096.1 <> na Primary Assembly 515984 na HG00099#1#h1tg000083l unplaced-scaffold na na JBHDWO010000097.1 <> na Primary Assembly 425571 na HG00099#1#h1tg000084l unplaced-scaffold na na JBHDWO010000098.1 <> na Primary Assembly 251991 na HG00099#1#h1tg000085l unplaced-scaffold na na JBHDWO010000099.1 <> na Primary Assembly 287518 na HG00099#1#h1tg000086l unplaced-scaffold na na JBHDWO010000100.1 <> na Primary Assembly 50178 na HG00099#1#h1tg000087l unplaced-scaffold na na JBHDWO010000101.1 <> na Primary Assembly 66058 na HG00099#1#h1tg000088l unplaced-scaffold na na JBHDWO010000102.1 <> na Primary Assembly 124814 na HG00099#1#h1tg000090l unplaced-scaffold na na JBHDWO010000103.1 <> na Primary Assembly 196703 na HG00099#1#h1tg000092l unplaced-scaffold na na JBHDWO010000104.1 <> na Primary Assembly 91210 na HG00099#1#h1tg000094l unplaced-scaffold na na JBHDWO010000105.1 <> na Primary Assembly 111911 na HG00099#1#h1tg000097l unplaced-scaffold na na JBHDWO010000106.1 <> na Primary Assembly 107186 na HG00099#1#h1tg000099l unplaced-scaffold na na JBHDWO010000107.1 <> na Primary Assembly 95706 na HG00099#1#h1tg000101l unplaced-scaffold na na JBHDWO010000108.1 <> na Primary Assembly 226465 na HG00099#1#h1tg000102l unplaced-scaffold na na JBHDWO010000109.1 <> na Primary Assembly 51198 na HG00099#1#h1tg000106l unplaced-scaffold na na JBHDWO010000110.1 <> na Primary Assembly 160049 na HG00099#1#h1tg000107l unplaced-scaffold na na JBHDWO010000111.1 <> na Primary Assembly 79926 na HG00099#1#h1tg000110l unplaced-scaffold na na JBHDWO010000112.1 <> na Primary Assembly 171841 na HG00099#1#h1tg000111l unplaced-scaffold na na JBHDWO010000113.1 <> na Primary Assembly 99705 na HG00099#1#h1tg000118l unplaced-scaffold na na JBHDWO010000114.1 <> na Primary Assembly 87721 na HG00099#1#h1tg000120l unplaced-scaffold na na JBHDWO010000115.1 <> na Primary Assembly 68713 na HG00099#1#h1tg000123l unplaced-scaffold na na JBHDWO010000116.1 <> na Primary Assembly 53963 na HG00099#1#h1tg000135l unplaced-scaffold na na JBHDWO010000117.1 <> na Primary Assembly 65618 na HG00099#1#h1tg000144l unplaced-scaffold na na JBHDWO010000118.1 <> na Primary Assembly 52047 na HG00099#1#h1tg000146l unplaced-scaffold na na JBHDWO010000119.1 <> na Primary Assembly 131828 na HG00099#1#h1tg000149l unplaced-scaffold na na JBHDWO010000120.1 <> na Primary Assembly 130454 na