# Assembly name: HG04199_pat_hprc_f2 # Organism name: Homo sapiens (human) # Isolate: HG04199 # Sex: male # Taxid: 9606 # BioSample: SAMN26267389 # BioProject: PRJNA1156155 # Submitter: UCSC Genomics Institute # Date: 2024-09-19 # Assembly type: haploid (paternal haplotype of diploid) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JBHDTH01 # Assembly method: Hifiasm v. 0.19.7 # Expected final version: no # Genome coverage: 68x # Sequencing technology: PacBio; Oxford Nanopore # GenBank assembly accession: GCA_042030015.1 # Linked assembly: GCA_042029385.1 (maternal haplotype of diploid) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_042030075.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name HG04199#1#h1tg000014l assembled-molecule 1 Chromosome CM086775.1 <> na Primary Assembly 240896707 na HG04199#1#h1tg000015l assembled-molecule 2 Chromosome CM086776.1 <> na Primary Assembly 242111598 na HG04199#1#h1tg000012l assembled-molecule 3 Chromosome CM086777.1 <> na Primary Assembly 200595129 na HG04199#1#h1tg000010l assembled-molecule 4 Chromosome CM086778.1 <> na Primary Assembly 191210056 na HG04199#1#h1tg000011l assembled-molecule 5 Chromosome CM086779.1 <> na Primary Assembly 180945751 na HG04199#1#h1tg000006l assembled-molecule 7 Chromosome CM086780.1 <> na Primary Assembly 159809854 na HG04199#1#h1tg000013l assembled-molecule 8 Chromosome CM086781.1 <> na Primary Assembly 146446841 na HG04199#1#h1tg000008l assembled-molecule 9 Chromosome CM086782.1 <> na Primary Assembly 141293537 na HG04199#1#h1tg000003l assembled-molecule 11 Chromosome CM086783.1 <> na Primary Assembly 137119381 na HG04199#1#h1tg000023l assembled-molecule 16 Chromosome CM086784.1 <> na Primary Assembly 91461659 na HG04199#1#h1tg000018l assembled-molecule 17 Chromosome CM086785.1 <> na Primary Assembly 85978873 na HG04199#1#h1tg000017l assembled-molecule 19 Chromosome CM086786.1 <> na Primary Assembly 62811826 na HG04199#1#h1tg000019l assembled-molecule 20 Chromosome CM086787.1 <> na Primary Assembly 67657868 na HG04199#1#h1tg000031l assembled-molecule 22 Chromosome CM086788.1 <> na Primary Assembly 48882780 na HG04199#1#h1tg000002l unplaced-scaffold na na JBHDTH010000001.1 <> na Primary Assembly 13703937 na HG04199#1#h1tg000007l unplaced-scaffold na na JBHDTH010000004.1 <> na Primary Assembly 83676975 na HG04199#1#h1tg000016l unplaced-scaffold na na JBHDTH010000009.1 <> na Primary Assembly 111332957 na HG04199#1#h1tg000020l unplaced-scaffold na na JBHDTH010000012.1 <> na Primary Assembly 11263635 na HG04199#1#h1tg000021l unplaced-scaffold na na JBHDTH010000013.1 <> na Primary Assembly 102854098 na HG04199#1#h1tg000022l unplaced-scaffold na na JBHDTH010000014.1 <> na Primary Assembly 41502852 na HG04199#1#h1tg000029l unplaced-scaffold na na JBHDTH010000016.1 <> na Primary Assembly 19437762 na HG04199#1#h1tg000033l unplaced-scaffold na na JBHDTH010000018.1 <> na Primary Assembly 197172 na HG04199#1#h1tg000034l unplaced-scaffold na na JBHDTH010000019.1 <> na Primary Assembly 275998 na HG04199#1#h1tg000038l unplaced-scaffold na na JBHDTH010000020.1 <> na Primary Assembly 1715056 na HG04199#1#h1tg000041l unplaced-scaffold na na JBHDTH010000021.1 <> na Primary Assembly 519726 na HG04199#1#h1tg000046l unplaced-scaffold na na JBHDTH010000022.1 <> na Primary Assembly 338706 na HG04199#1#h1tg000047l unplaced-scaffold na na JBHDTH010000023.1 <> na Primary Assembly 63177 na HG04199#1#h1tg000048l unplaced-scaffold na na JBHDTH010000024.1 <> na Primary Assembly 89010 na HG04199#1#h1tg000050l unplaced-scaffold na na JBHDTH010000025.1 <> na Primary Assembly 206304 na HG04199#1#h1tg000051l unplaced-scaffold na na JBHDTH010000026.1 <> na Primary Assembly 64554 na HG04199#1#h1tg000054l unplaced-scaffold na na JBHDTH010000027.1 <> na Primary Assembly 210561 na HG04199#1#h1tg000055l unplaced-scaffold na na JBHDTH010000028.1 <> na Primary Assembly 53663 na HG04199#1#h1tg000059l unplaced-scaffold na na JBHDTH010000029.1 <> na Primary Assembly 126451 na HG04199#1#h1tg000075l unplaced-scaffold na na JBHDTH010000030.1 <> na Primary Assembly 72111 na HG04199#1#h1tg000078l unplaced-scaffold na na JBHDTH010000031.1 <> na Primary Assembly 135599 na HG04199#1#h1tg000079l unplaced-scaffold na na JBHDTH010000032.1 <> na Primary Assembly 81433 na HG04199#1#h1tg000080l unplaced-scaffold na na JBHDTH010000033.1 <> na Primary Assembly 156654 na HG04199#1#h1tg000081l unplaced-scaffold na na JBHDTH010000034.1 <> na Primary Assembly 51588 na HG04199#1#h1tg000082l unplaced-scaffold na na JBHDTH010000035.1 <> na Primary Assembly 59396 na HG04199#1#h1tg000084l unplaced-scaffold na na JBHDTH010000036.1 <> na Primary Assembly 84017 na HG04199#1#h1tg000086l unplaced-scaffold na na JBHDTH010000037.1 <> na Primary Assembly 69452 na HG04199#1#h1tg000093l unplaced-scaffold na na JBHDTH010000038.1 <> na Primary Assembly 66159 na HG04199#1#h1tg000094l unplaced-scaffold na na JBHDTH010000039.1 <> na Primary Assembly 51252 na HG04199#1#h1tg000095l unplaced-scaffold na na JBHDTH010000040.1 <> na Primary Assembly 107661 na HG04199#1#h1tg000099l unplaced-scaffold na na JBHDTH010000041.1 <> na Primary Assembly 51354 na HG04199#1#h1tg000103l unplaced-scaffold na na JBHDTH010000042.1 <> na Primary Assembly 52970 na HG04199#1#h1tg000105l unplaced-scaffold na na JBHDTH010000043.1 <> na Primary Assembly 56185 na HG04199#1#h1tg000117l unplaced-scaffold na na JBHDTH010000044.1 <> na Primary Assembly 72205 na HG04199#1#h1tg000145l unplaced-scaffold na na JBHDTH010000045.1 <> na Primary Assembly 54797 na HG04199#1#h1tg000147l unplaced-scaffold na na JBHDTH010000046.1 <> na Primary Assembly 56124 na HG04199#1#h1tg000148l unplaced-scaffold na na JBHDTH010000047.1 <> na Primary Assembly 56192 na HG04199#1#h1tg000001l unplaced-scaffold na na JBHDTH010000048.1 <> na Primary Assembly 136565355 na HG04199#1#h1tg000004l unplaced-scaffold na na JBHDTH010000049.1 <> na Primary Assembly 17193015 na HG04199#1#h1tg000005l unplaced-scaffold na na JBHDTH010000050.1 <> na Primary Assembly 96212046 na HG04199#1#h1tg000009l unplaced-scaffold na na JBHDTH010000051.1 <> na Primary Assembly 134975858 na HG04199#1#h1tg000024l unplaced-scaffold na na JBHDTH010000056.1 <> na Primary Assembly 61523981 na HG04199#1#h1tg000025l unplaced-scaffold na na JBHDTH010000057.1 <> na Primary Assembly 12876391 na HG04199#1#h1tg000026l unplaced-scaffold na na JBHDTH010000058.1 <> na Primary Assembly 10689312 na HG04199#1#h1tg000027l unplaced-scaffold na na JBHDTH010000059.1 <> na Primary Assembly 59998835 na HG04199#1#h1tg000028l unplaced-scaffold na na JBHDTH010000060.1 <> na Primary Assembly 2769852 na HG04199#1#h1tg000030l unplaced-scaffold na na JBHDTH010000061.1 <> na Primary Assembly 2873470 na HG04199#1#h1tg000035l unplaced-scaffold na na JBHDTH010000062.1 <> na Primary Assembly 111646 na HG04199#1#h1tg000036l unplaced-scaffold na na JBHDTH010000063.1 <> na Primary Assembly 1198210 na HG04199#1#h1tg000037l unplaced-scaffold na na JBHDTH010000064.1 <> na Primary Assembly 337883 na HG04199#1#h1tg000039l unplaced-scaffold na na JBHDTH010000065.1 <> na Primary Assembly 360235 na HG04199#1#h1tg000040l unplaced-scaffold na na JBHDTH010000066.1 <> na Primary Assembly 434239 na HG04199#1#h1tg000042l unplaced-scaffold na na JBHDTH010000067.1 <> na Primary Assembly 352950 na HG04199#1#h1tg000043l unplaced-scaffold na na JBHDTH010000068.1 <> na Primary Assembly 647927 na HG04199#1#h1tg000044l unplaced-scaffold na na JBHDTH010000069.1 <> na Primary Assembly 544557 na HG04199#1#h1tg000045l unplaced-scaffold na na JBHDTH010000070.1 <> na Primary Assembly 61416 na HG04199#1#h1tg000049l unplaced-scaffold na na JBHDTH010000071.1 <> na Primary Assembly 237429 na HG04199#1#h1tg000052l unplaced-scaffold na na JBHDTH010000072.1 <> na Primary Assembly 89980 na HG04199#1#h1tg000056l unplaced-scaffold na na JBHDTH010000073.1 <> na Primary Assembly 144138 na HG04199#1#h1tg000058l unplaced-scaffold na na JBHDTH010000074.1 <> na Primary Assembly 133866 na HG04199#1#h1tg000060l unplaced-scaffold na na JBHDTH010000075.1 <> na Primary Assembly 101260 na HG04199#1#h1tg000062l unplaced-scaffold na na JBHDTH010000076.1 <> na Primary Assembly 332188 na HG04199#1#h1tg000064l unplaced-scaffold na na JBHDTH010000077.1 <> na Primary Assembly 268878 na HG04199#1#h1tg000065l unplaced-scaffold na na JBHDTH010000078.1 <> na Primary Assembly 73930 na HG04199#1#h1tg000066l unplaced-scaffold na na JBHDTH010000079.1 <> na Primary Assembly 61390 na HG04199#1#h1tg000067l unplaced-scaffold na na JBHDTH010000080.1 <> na Primary Assembly 51719 na HG04199#1#h1tg000068l unplaced-scaffold na na JBHDTH010000081.1 <> na Primary Assembly 55366 na HG04199#1#h1tg000070l unplaced-scaffold na na JBHDTH010000082.1 <> na Primary Assembly 189313 na HG04199#1#h1tg000071l unplaced-scaffold na na JBHDTH010000083.1 <> na Primary Assembly 155098 na HG04199#1#h1tg000072l unplaced-scaffold na na JBHDTH010000084.1 <> na Primary Assembly 146092 na HG04199#1#h1tg000073l unplaced-scaffold na na JBHDTH010000085.1 <> na Primary Assembly 71123 na HG04199#1#h1tg000074l unplaced-scaffold na na JBHDTH010000086.1 <> na Primary Assembly 232231 na HG04199#1#h1tg000077l unplaced-scaffold na na JBHDTH010000087.1 <> na Primary Assembly 108646 na HG04199#1#h1tg000083l unplaced-scaffold na na JBHDTH010000088.1 <> na Primary Assembly 58183 na HG04199#1#h1tg000085l unplaced-scaffold na na JBHDTH010000089.1 <> na Primary Assembly 66904 na HG04199#1#h1tg000088l unplaced-scaffold na na JBHDTH010000090.1 <> na Primary Assembly 72402 na HG04199#1#h1tg000090l unplaced-scaffold na na JBHDTH010000091.1 <> na Primary Assembly 58865 na HG04199#1#h1tg000091l unplaced-scaffold na na JBHDTH010000092.1 <> na Primary Assembly 81252 na HG04199#1#h1tg000097l unplaced-scaffold na na JBHDTH010000093.1 <> na Primary Assembly 68063 na HG04199#1#h1tg000108l unplaced-scaffold na na JBHDTH010000094.1 <> na Primary Assembly 52683 na HG04199#1#h1tg000115l unplaced-scaffold na na JBHDTH010000095.1 <> na Primary Assembly 69445 na HG04199#1#h1tg000119l unplaced-scaffold na na JBHDTH010000096.1 <> na Primary Assembly 60962 na