# Assembly name: HG04115_pat_hprc_f2 # Organism name: Homo sapiens (human) # Isolate: HG04115 # Sex: male # Taxid: 9606 # BioSample: SAMN26267388 # BioProject: PRJNA1156154 # Submitter: UCSC Genomics Institute # Date: 2024-09-19 # Assembly type: haploid (paternal haplotype of diploid) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JBHDTF01 # Assembly method: Hifiasm v. 0.19.7 # Expected final version: no # Genome coverage: 69x # Sequencing technology: PacBio; Oxford Nanopore # GenBank assembly accession: GCA_042029955.1 # Linked assembly: GCA_042028945.1 (maternal haplotype of diploid) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_042029985.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name HG04115#1#h1tg000006l assembled-molecule 2 Chromosome CM086752.1 <> na Primary Assembly 242107628 na HG04115#1#h1tg000018l assembled-molecule 3 Chromosome CM086753.1 <> na Primary Assembly 201955154 na HG04115#1#h1tg000002l assembled-molecule 7 Chromosome CM086754.1 <> na Primary Assembly 161164699 na HG04115#1#h1tg000007l assembled-molecule 8 Chromosome CM086755.1 <> na Primary Assembly 146769123 na HG04115#1#h1tg000021l assembled-molecule 9 Chromosome CM086756.1 <> na Primary Assembly 139986184 na HG04115#1#h1tg000008l assembled-molecule 10 Chromosome CM086757.1 <> na Primary Assembly 134689526 na HG04115#1#h1tg000013l assembled-molecule 11 Chromosome CM086758.1 <> na Primary Assembly 137239711 na HG04115#1#h1tg000012l assembled-molecule 12 Chromosome CM086759.1 <> na Primary Assembly 133305728 na HG04115#1#h1tg000004l assembled-molecule 16 Chromosome CM086760.1 <> na Primary Assembly 90170367 na HG04115#1#h1tg000010l assembled-molecule 18 Chromosome CM086761.1 <> na Primary Assembly 80018574 na HG04115#1#h1tg000015l assembled-molecule 19 Chromosome CM086762.1 <> na Primary Assembly 62815931 na HG04115#1#h1tg000001l unplaced-scaffold na na JBHDTF010000001.1 <> na Primary Assembly 93171058 na HG04115#1#h1tg000003l unplaced-scaffold na na JBHDTF010000003.1 <> na Primary Assembly 2399325 na HG04115#1#h1tg000009l unplaced-scaffold na na JBHDTF010000006.1 <> na Primary Assembly 45493051 na HG04115#1#h1tg000014l unplaced-scaffold na na JBHDTF010000009.1 <> na Primary Assembly 109266312 na HG04115#1#h1tg000016l unplaced-scaffold na na JBHDTF010000011.1 <> na Primary Assembly 111364050 na HG04115#1#h1tg000025l unplaced-scaffold na na JBHDTF010000014.1 <> na Primary Assembly 134586742 na HG04115#1#h1tg000027l unplaced-scaffold na na JBHDTF010000015.1 <> na Primary Assembly 96005188 na HG04115#1#h1tg000028l unplaced-scaffold na na JBHDTF010000016.1 <> na Primary Assembly 11540746 na HG04115#1#h1tg000029l unplaced-scaffold na na JBHDTF010000017.1 <> na Primary Assembly 59095721 na HG04115#1#h1tg000030l unplaced-scaffold na na JBHDTF010000018.1 <> na Primary Assembly 49505753 na HG04115#1#h1tg000031l unplaced-scaffold na na JBHDTF010000019.1 <> na Primary Assembly 24800514 na HG04115#1#h1tg000032l unplaced-scaffold na na JBHDTF010000020.1 <> na Primary Assembly 10404749 na HG04115#1#h1tg000035l unplaced-scaffold na na JBHDTF010000021.1 <> na Primary Assembly 968508 na HG04115#1#h1tg000040l unplaced-scaffold na na JBHDTF010000022.1 <> na Primary Assembly 1297092 na HG04115#1#h1tg000042l unplaced-scaffold na na JBHDTF010000023.1 <> na Primary Assembly 1846517 na HG04115#1#h1tg000046l unplaced-scaffold na na JBHDTF010000024.1 <> na Primary Assembly 4413505 na HG04115#1#h1tg000051l unplaced-scaffold na na JBHDTF010000025.1 <> na Primary Assembly 35404400 na HG04115#1#h1tg000052l unplaced-scaffold na na JBHDTF010000026.1 <> na Primary Assembly 225454 na HG04115#1#h1tg000055l unplaced-scaffold na na JBHDTF010000027.1 <> na Primary Assembly 83138 na HG04115#1#h1tg000059l unplaced-scaffold na na JBHDTF010000028.1 <> na Primary Assembly 212069 na HG04115#1#h1tg000061l unplaced-scaffold na na JBHDTF010000029.1 <> na Primary Assembly 449808 na HG04115#1#h1tg000062l unplaced-scaffold na na JBHDTF010000030.1 <> na Primary Assembly 72368 na HG04115#1#h1tg000063l unplaced-scaffold na na JBHDTF010000031.1 <> na Primary Assembly 175883 na HG04115#1#h1tg000064l unplaced-scaffold na na JBHDTF010000032.1 <> na Primary Assembly 62628 na HG04115#1#h1tg000065l unplaced-scaffold na na JBHDTF010000033.1 <> na Primary Assembly 63657 na HG04115#1#h1tg000066l unplaced-scaffold na na JBHDTF010000034.1 <> na Primary Assembly 890301 na HG04115#1#h1tg000067l unplaced-scaffold na na JBHDTF010000035.1 <> na Primary Assembly 72161 na HG04115#1#h1tg000073l unplaced-scaffold na na JBHDTF010000036.1 <> na Primary Assembly 56680 na HG04115#1#h1tg000074l unplaced-scaffold na na JBHDTF010000037.1 <> na Primary Assembly 222572 na HG04115#1#h1tg000077l unplaced-scaffold na na JBHDTF010000038.1 <> na Primary Assembly 52263 na HG04115#1#h1tg000081l unplaced-scaffold na na JBHDTF010000039.1 <> na Primary Assembly 106210 na HG04115#1#h1tg000083l unplaced-scaffold na na JBHDTF010000040.1 <> na Primary Assembly 119476 na HG04115#1#h1tg000085l unplaced-scaffold na na JBHDTF010000041.1 <> na Primary Assembly 73625 na HG04115#1#h1tg000089l unplaced-scaffold na na JBHDTF010000042.1 <> na Primary Assembly 71469 na HG04115#1#h1tg000091l unplaced-scaffold na na JBHDTF010000043.1 <> na Primary Assembly 155392 na HG04115#1#h1tg000102l unplaced-scaffold na na JBHDTF010000044.1 <> na Primary Assembly 149937 na HG04115#1#h1tg000105l unplaced-scaffold na na JBHDTF010000045.1 <> na Primary Assembly 51894 na HG04115#1#h1tg000107l unplaced-scaffold na na JBHDTF010000046.1 <> na Primary Assembly 67887 na HG04115#1#h1tg000112l unplaced-scaffold na na JBHDTF010000047.1 <> na Primary Assembly 151185 na HG04115#1#h1tg000113l unplaced-scaffold na na JBHDTF010000048.1 <> na Primary Assembly 110878 na HG04115#1#h1tg000125l unplaced-scaffold na na JBHDTF010000049.1 <> na Primary Assembly 65813 na HG04115#1#h1tg000134l unplaced-scaffold na na JBHDTF010000050.1 <> na Primary Assembly 52294 na HG04115#1#h1tg000145l unplaced-scaffold na na JBHDTF010000051.1 <> na Primary Assembly 65130 na HG04115#1#h1tg000150l unplaced-scaffold na na JBHDTF010000052.1 <> na Primary Assembly 63215 na HG04115#1#h1tg000005l unplaced-scaffold na na JBHDTF010000053.1 <> na Primary Assembly 190833469 na HG04115#1#h1tg000011l unplaced-scaffold na na JBHDTF010000057.1 <> na Primary Assembly 61414912 na HG04115#1#h1tg000017l unplaced-scaffold na na JBHDTF010000058.1 <> na Primary Assembly 104597950 na HG04115#1#h1tg000019l unplaced-scaffold na na JBHDTF010000059.1 <> na Primary Assembly 29323034 na HG04115#1#h1tg000020l unplaced-scaffold na na JBHDTF010000060.1 <> na Primary Assembly 129602348 na HG04115#1#h1tg000022l unplaced-scaffold na na JBHDTF010000061.1 <> na Primary Assembly 2996162 na HG04115#1#h1tg000023l unplaced-scaffold na na JBHDTF010000062.1 <> na Primary Assembly 67965375 na HG04115#1#h1tg000024l unplaced-scaffold na na JBHDTF010000063.1 <> na Primary Assembly 844801 na HG04115#1#h1tg000026l unplaced-scaffold na na JBHDTF010000064.1 <> na Primary Assembly 123420 na HG04115#1#h1tg000033l unplaced-scaffold na na JBHDTF010000065.1 <> na Primary Assembly 3359296 na HG04115#1#h1tg000034l unplaced-scaffold na na JBHDTF010000066.1 <> na Primary Assembly 11120301 na HG04115#1#h1tg000037l unplaced-scaffold na na JBHDTF010000067.1 <> na Primary Assembly 3176382 na HG04115#1#h1tg000038l unplaced-scaffold na na JBHDTF010000068.1 <> na Primary Assembly 4229419 na HG04115#1#h1tg000039l unplaced-scaffold na na JBHDTF010000069.1 <> na Primary Assembly 356204 na HG04115#1#h1tg000043l unplaced-scaffold na na JBHDTF010000070.1 <> na Primary Assembly 3113318 na HG04115#1#h1tg000044l unplaced-scaffold na na JBHDTF010000071.1 <> na Primary Assembly 2050903 na HG04115#1#h1tg000045l unplaced-scaffold na na JBHDTF010000072.1 <> na Primary Assembly 246236 na HG04115#1#h1tg000047l unplaced-scaffold na na JBHDTF010000073.1 <> na Primary Assembly 184447 na HG04115#1#h1tg000048l unplaced-scaffold na na JBHDTF010000074.1 <> na Primary Assembly 192834 na HG04115#1#h1tg000049l unplaced-scaffold na na JBHDTF010000075.1 <> na Primary Assembly 329884 na HG04115#1#h1tg000050l unplaced-scaffold na na JBHDTF010000076.1 <> na Primary Assembly 1335594 na HG04115#1#h1tg000053l unplaced-scaffold na na JBHDTF010000077.1 <> na Primary Assembly 914774 na HG04115#1#h1tg000056l unplaced-scaffold na na JBHDTF010000078.1 <> na Primary Assembly 267013 na HG04115#1#h1tg000057l unplaced-scaffold na na JBHDTF010000079.1 <> na Primary Assembly 101097 na HG04115#1#h1tg000058l unplaced-scaffold na na JBHDTF010000080.1 <> na Primary Assembly 76818 na HG04115#1#h1tg000060l unplaced-scaffold na na JBHDTF010000081.1 <> na Primary Assembly 243330 na HG04115#1#h1tg000068l unplaced-scaffold na na JBHDTF010000082.1 <> na Primary Assembly 68277 na HG04115#1#h1tg000069l unplaced-scaffold na na JBHDTF010000083.1 <> na Primary Assembly 104715 na HG04115#1#h1tg000071l unplaced-scaffold na na JBHDTF010000084.1 <> na Primary Assembly 61792 na HG04115#1#h1tg000075l unplaced-scaffold na na JBHDTF010000085.1 <> na Primary Assembly 65542 na HG04115#1#h1tg000078l unplaced-scaffold na na JBHDTF010000086.1 <> na Primary Assembly 360524 na HG04115#1#h1tg000079l unplaced-scaffold na na JBHDTF010000087.1 <> na Primary Assembly 93303 na HG04115#1#h1tg000086l unplaced-scaffold na na JBHDTF010000088.1 <> na Primary Assembly 231269 na HG04115#1#h1tg000087l unplaced-scaffold na na JBHDTF010000089.1 <> na Primary Assembly 91329 na HG04115#1#h1tg000094l unplaced-scaffold na na JBHDTF010000090.1 <> na Primary Assembly 50036 na HG04115#1#h1tg000095l unplaced-scaffold na na JBHDTF010000091.1 <> na Primary Assembly 106864 na HG04115#1#h1tg000096l unplaced-scaffold na na JBHDTF010000092.1 <> na Primary Assembly 79015 na HG04115#1#h1tg000099l unplaced-scaffold na na JBHDTF010000093.1 <> na Primary Assembly 65533 na HG04115#1#h1tg000100l unplaced-scaffold na na JBHDTF010000094.1 <> na Primary Assembly 60229 na HG04115#1#h1tg000101l unplaced-scaffold na na JBHDTF010000095.1 <> na Primary Assembly 136206 na HG04115#1#h1tg000103l unplaced-scaffold na na JBHDTF010000096.1 <> na Primary Assembly 51723 na HG04115#1#h1tg000104l unplaced-scaffold na na JBHDTF010000097.1 <> na Primary Assembly 69291 na HG04115#1#h1tg000109l unplaced-scaffold na na JBHDTF010000098.1 <> na Primary Assembly 174112 na HG04115#1#h1tg000114l unplaced-scaffold na na JBHDTF010000099.1 <> na Primary Assembly 57649 na HG04115#1#h1tg000115l unplaced-scaffold na na JBHDTF010000100.1 <> na Primary Assembly 69952 na HG04115#1#h1tg000116l unplaced-scaffold na na JBHDTF010000101.1 <> na Primary Assembly 215831 na HG04115#1#h1tg000117l unplaced-scaffold na na JBHDTF010000102.1 <> na Primary Assembly 115581 na HG04115#1#h1tg000127l unplaced-scaffold na na JBHDTF010000103.1 <> na Primary Assembly 126857 na HG04115#1#h1tg000128l unplaced-scaffold na na JBHDTF010000104.1 <> na Primary Assembly 60227 na HG04115#1#h1tg000132l unplaced-scaffold na na JBHDTF010000105.1 <> na Primary Assembly 90479 na HG04115#1#h1tg000133l unplaced-scaffold na na JBHDTF010000106.1 <> na Primary Assembly 58800 na