# Assembly name: HG03688_mat_hprc_f2 # Organism name: Homo sapiens (human) # Isolate: HG03688 # Sex: male # Taxid: 9606 # BioSample: SAMN26267385 # BioProject: PRJNA1156121 # Submitter: UCSC Genomics Institute # Date: 2024-09-19 # Assembly type: haploid (maternal haplotype of diploid) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JBHDTK01 # Assembly method: Hifiasm v. 0.19.7 # Expected final version: no # Genome coverage: 62x # Sequencing technology: PacBio; Oxford Nanopore # GenBank assembly accession: GCA_042029545.1 # Linked assembly: GCA_042030025.1 (paternal haplotype of diploid) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_042029715.1 Primary Assembly ## GCA_042029835.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name HG03688#2#h2tg000011l assembled-molecule 1 Chromosome CM086813.1 <> na Primary Assembly 241982019 na HG03688#2#h2tg000004l assembled-molecule 2 Chromosome CM086814.1 <> na Primary Assembly 242477979 na HG03688#2#h2tg000021l assembled-molecule 3 Chromosome CM086815.1 <> na Primary Assembly 203992432 na HG03688#2#h2tg000008l assembled-molecule 5 Chromosome CM086816.1 <> na Primary Assembly 183496789 na HG03688#2#h2tg000026l assembled-molecule 7 Chromosome CM086817.1 <> na Primary Assembly 161330271 na HG03688#2#h2tg000017l assembled-molecule 11 Chromosome CM086818.1 <> na Primary Assembly 135466576 na HG03688#2#h2tg000015l assembled-molecule 12 Chromosome CM086819.1 <> na Primary Assembly 135595487 na HG03688#2#h2tg000023l assembled-molecule 16 Chromosome CM086820.1 <> na Primary Assembly 92430852 na HG03688#2#h2tg000012l assembled-molecule 19 Chromosome CM086821.1 <> na Primary Assembly 61415313 na HG03688#2#h2tg000029l assembled-molecule 20 Chromosome CM086822.1 <> na Primary Assembly 67196705 na HG03688#2#h2tg000002l unplaced-scaffold na na JBHDTK010000001.1 <> na Primary Assembly 46830313 na HG03688#2#h2tg000003l unplaced-scaffold na na JBHDTK010000002.1 <> na Primary Assembly 18368089 na HG03688#2#h2tg000006l unplaced-scaffold na na JBHDTK010000003.1 <> na Primary Assembly 58266505 na HG03688#2#h2tg000013l unplaced-scaffold na na JBHDTK010000005.1 <> na Primary Assembly 96128944 na HG03688#2#h2tg000014l unplaced-scaffold na na JBHDTK010000006.1 <> na Primary Assembly 103736525 na HG03688#2#h2tg000016l unplaced-scaffold na na JBHDTK010000008.1 <> na Primary Assembly 22692348 na HG03688#2#h2tg000018l unplaced-scaffold na na JBHDTK010000009.1 <> na Primary Assembly 198057 na HG03688#2#h2tg000019l unplaced-scaffold na na JBHDTK010000010.1 <> na Primary Assembly 147103188 na HG03688#2#h2tg000022l unplaced-scaffold na na JBHDTK010000012.1 <> na Primary Assembly 140248461 na HG03688#2#h2tg000024l unplaced-scaffold na na JBHDTK010000013.1 <> na Primary Assembly 40877773 na HG03688#2#h2tg000027l unplaced-scaffold na na JBHDTK010000015.1 <> na Primary Assembly 96029267 na HG03688#2#h2tg000030l unplaced-scaffold na na JBHDTK010000017.1 <> na Primary Assembly 50932380 na HG03688#2#h2tg000035l unplaced-scaffold na na JBHDTK010000018.1 <> na Primary Assembly 4553042 na HG03688#2#h2tg000042l unplaced-scaffold na na JBHDTK010000019.1 <> na Primary Assembly 329919 na HG03688#2#h2tg000044l unplaced-scaffold na na JBHDTK010000020.1 <> na Primary Assembly 172483 na HG03688#2#h2tg000045l unplaced-scaffold na na JBHDTK010000021.1 <> na Primary Assembly 993052 na HG03688#2#h2tg000048l unplaced-scaffold na na JBHDTK010000022.1 <> na Primary Assembly 474702 na HG03688#2#h2tg000049l unplaced-scaffold na na JBHDTK010000023.1 <> na Primary Assembly 553181 na HG03688#2#h2tg000050l unplaced-scaffold na na JBHDTK010000024.1 <> na Primary Assembly 60895 na HG03688#2#h2tg000051l unplaced-scaffold na na JBHDTK010000025.1 <> na Primary Assembly 371021 na HG03688#2#h2tg000052l unplaced-scaffold na na JBHDTK010000026.1 <> na Primary Assembly 301899 na HG03688#2#h2tg000053l unplaced-scaffold na na JBHDTK010000027.1 <> na Primary Assembly 113333 na HG03688#2#h2tg000061l unplaced-scaffold na na JBHDTK010000028.1 <> na Primary Assembly 194592 na HG03688#2#h2tg000062l unplaced-scaffold na na JBHDTK010000029.1 <> na Primary Assembly 58487 na HG03688#2#h2tg000063l unplaced-scaffold na na JBHDTK010000030.1 <> na Primary Assembly 530096 na HG03688#2#h2tg000064l unplaced-scaffold na na JBHDTK010000031.1 <> na Primary Assembly 91782 na HG03688#2#h2tg000065l unplaced-scaffold na na JBHDTK010000032.1 <> na Primary Assembly 80152 na HG03688#2#h2tg000068l unplaced-scaffold na na JBHDTK010000033.1 <> na Primary Assembly 147156 na HG03688#2#h2tg000071l unplaced-scaffold na na JBHDTK010000034.1 <> na Primary Assembly 71399 na HG03688#2#h2tg000072l unplaced-scaffold na na JBHDTK010000035.1 <> na Primary Assembly 290220 na HG03688#2#h2tg000073l unplaced-scaffold na na JBHDTK010000036.1 <> na Primary Assembly 157881 na HG03688#2#h2tg000074l unplaced-scaffold na na JBHDTK010000037.1 <> na Primary Assembly 162360 na HG03688#2#h2tg000075l unplaced-scaffold na na JBHDTK010000038.1 <> na Primary Assembly 98624 na HG03688#2#h2tg000078l unplaced-scaffold na na JBHDTK010000039.1 <> na Primary Assembly 263044 na HG03688#2#h2tg000079l unplaced-scaffold na na JBHDTK010000040.1 <> na Primary Assembly 55276 na HG03688#2#h2tg000088l unplaced-scaffold na na JBHDTK010000041.1 <> na Primary Assembly 57422 na HG03688#2#h2tg000091l unplaced-scaffold na na JBHDTK010000042.1 <> na Primary Assembly 147119 na HG03688#2#h2tg000092l unplaced-scaffold na na JBHDTK010000043.1 <> na Primary Assembly 145979 na HG03688#2#h2tg000093l unplaced-scaffold na na JBHDTK010000044.1 <> na Primary Assembly 54405 na HG03688#2#h2tg000104l unplaced-scaffold na na JBHDTK010000045.1 <> na Primary Assembly 68599 na HG03688#2#h2tg000109l unplaced-scaffold na na JBHDTK010000046.1 <> na Primary Assembly 53828 na HG03688#2#h2tg000114l unplaced-scaffold na na JBHDTK010000047.1 <> na Primary Assembly 52869 na HG03688#2#h2tg000143l unplaced-scaffold na na JBHDTK010000048.1 <> na Primary Assembly 54050 na HG03688#2#h2tg000001l unplaced-scaffold na na JBHDTK010000049.1 <> na Primary Assembly 92711532 na HG03688#2#h2tg000005l unplaced-scaffold na na JBHDTK010000051.1 <> na Primary Assembly 111070841 na HG03688#2#h2tg000007l unplaced-scaffold na na JBHDTK010000052.1 <> na Primary Assembly 134975283 na HG03688#2#h2tg000009l unplaced-scaffold na na JBHDTK010000054.1 <> na Primary Assembly 60119449 na HG03688#2#h2tg000010l unplaced-scaffold na na JBHDTK010000055.1 <> na Primary Assembly 61281263 na HG03688#2#h2tg000020l unplaced-scaffold na na JBHDTK010000058.1 <> na Primary Assembly 2718216 na HG03688#2#h2tg000025l unplaced-scaffold na na JBHDTK010000060.1 <> na Primary Assembly 141129683 na HG03688#2#h2tg000028l unplaced-scaffold na na JBHDTK010000061.1 <> na Primary Assembly 54824107 na HG03688#2#h2tg000031l unplaced-scaffold na na JBHDTK010000062.1 <> na Primary Assembly 3268722 na HG03688#2#h2tg000032l unplaced-scaffold na na JBHDTK010000063.1 <> na Primary Assembly 3057955 na HG03688#2#h2tg000033l unplaced-scaffold na na JBHDTK010000064.1 <> na Primary Assembly 770301 na HG03688#2#h2tg000036l unplaced-scaffold na na JBHDTK010000065.1 <> na Primary Assembly 1031072 na HG03688#2#h2tg000037l unplaced-scaffold na na JBHDTK010000066.1 <> na Primary Assembly 3501975 na HG03688#2#h2tg000038l unplaced-scaffold na na JBHDTK010000067.1 <> na Primary Assembly 383567 na HG03688#2#h2tg000039l unplaced-scaffold na na JBHDTK010000068.1 <> na Primary Assembly 3761153 na HG03688#2#h2tg000040l unplaced-scaffold na na JBHDTK010000069.1 <> na Primary Assembly 3151527 na HG03688#2#h2tg000041l unplaced-scaffold na na JBHDTK010000070.1 <> na Primary Assembly 353715 na HG03688#2#h2tg000046l unplaced-scaffold na na JBHDTK010000071.1 <> na Primary Assembly 84072 na HG03688#2#h2tg000047l unplaced-scaffold na na JBHDTK010000072.1 <> na Primary Assembly 128548 na HG03688#2#h2tg000054l unplaced-scaffold na na JBHDTK010000073.1 <> na Primary Assembly 55883 na HG03688#2#h2tg000055l unplaced-scaffold na na JBHDTK010000074.1 <> na Primary Assembly 119821 na HG03688#2#h2tg000056l unplaced-scaffold na na JBHDTK010000075.1 <> na Primary Assembly 150066 na HG03688#2#h2tg000058l unplaced-scaffold na na JBHDTK010000076.1 <> na Primary Assembly 74004 na HG03688#2#h2tg000059l unplaced-scaffold na na JBHDTK010000077.1 <> na Primary Assembly 89951 na HG03688#2#h2tg000066l unplaced-scaffold na na JBHDTK010000078.1 <> na Primary Assembly 70650 na HG03688#2#h2tg000067l unplaced-scaffold na na JBHDTK010000079.1 <> na Primary Assembly 64084 na HG03688#2#h2tg000070l unplaced-scaffold na na JBHDTK010000080.1 <> na Primary Assembly 147858 na HG03688#2#h2tg000076l unplaced-scaffold na na JBHDTK010000081.1 <> na Primary Assembly 135668 na HG03688#2#h2tg000081l unplaced-scaffold na na JBHDTK010000082.1 <> na Primary Assembly 66739 na HG03688#2#h2tg000083l unplaced-scaffold na na JBHDTK010000083.1 <> na Primary Assembly 215796 na HG03688#2#h2tg000084l unplaced-scaffold na na JBHDTK010000084.1 <> na Primary Assembly 63996 na HG03688#2#h2tg000085l unplaced-scaffold na na JBHDTK010000085.1 <> na Primary Assembly 111674 na HG03688#2#h2tg000086l unplaced-scaffold na na JBHDTK010000086.1 <> na Primary Assembly 64162 na HG03688#2#h2tg000090l unplaced-scaffold na na JBHDTK010000087.1 <> na Primary Assembly 99025 na HG03688#2#h2tg000098l unplaced-scaffold na na JBHDTK010000088.1 <> na Primary Assembly 68987 na HG03688#2#h2tg000099l unplaced-scaffold na na JBHDTK010000089.1 <> na Primary Assembly 95758 na HG03688#2#h2tg000105l unplaced-scaffold na na JBHDTK010000090.1 <> na Primary Assembly 87334 na HG03688#2#h2tg000106l unplaced-scaffold na na JBHDTK010000091.1 <> na Primary Assembly 82791 na HG03688#2#h2tg000107l unplaced-scaffold na na JBHDTK010000092.1 <> na Primary Assembly 80657 na HG03688#2#h2tg000116l unplaced-scaffold na na JBHDTK010000093.1 <> na Primary Assembly 63456 na HG03688#2#h2tg000123l unplaced-scaffold na na JBHDTK010000094.1 <> na Primary Assembly 65721 na HG03688#2#h2tg000131l unplaced-scaffold na na JBHDTK010000095.1 <> na Primary Assembly 105084 na HG03688#2#h2tg000146l unplaced-scaffold na na JBHDTK010000096.1 <> na Primary Assembly 68992 na HG03688#2#ptg000001l_rc_rotated unlocalized-scaffold MT Mitochondrion JBHDTK010000097.1 <> na non-nuclear 16574 na