# Assembly name: HG03654_mat_hprc_f2 # Organism name: Homo sapiens (human) # Isolate: HG03654 # Sex: male # Taxid: 9606 # BioSample: SAMN26237511 # BioProject: PRJNA1156123 # Submitter: UCSC Genomics Institute # Date: 2024-09-19 # Assembly type: haploid (maternal haplotype of diploid) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JBHDTO01 # Assembly method: Hifiasm v. 0.19.7 # Expected final version: no # Genome coverage: 66x # Sequencing technology: PacBio; Oxford Nanopore # GenBank assembly accession: GCA_042029535.1 # Linked assembly: GCA_042030035.1 (paternal haplotype of diploid) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_042029735.1 Primary Assembly ## GCA_042029825.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name HG03654#2#h2tg000001l assembled-molecule 2 Chromosome CM086854.1 <> na Primary Assembly 242327951 na HG03654#2#h2tg000008l assembled-molecule 4 Chromosome CM086855.1 <> na Primary Assembly 192206147 na HG03654#2#h2tg000013l assembled-molecule 5 Chromosome CM086856.1 <> na Primary Assembly 181933956 na HG03654#2#h2tg000012l assembled-molecule 8 Chromosome CM086857.1 <> na Primary Assembly 144995125 na HG03654#2#h2tg000005l assembled-molecule 9 Chromosome CM086858.1 <> na Primary Assembly 139290050 na HG03654#2#h2tg000021l assembled-molecule 10 Chromosome CM086859.1 <> na Primary Assembly 135979257 na HG03654#2#h2tg000017l assembled-molecule 11 Chromosome CM086860.1 <> na Primary Assembly 134372487 na HG03654#2#h2tg000018l assembled-molecule 12 Chromosome CM086861.1 <> na Primary Assembly 132703527 na HG03654#2#h2tg000020l assembled-molecule 16 Chromosome CM086862.1 <> na Primary Assembly 89263356 na HG03654#2#h2tg000022l assembled-molecule 17 Chromosome CM086863.1 <> na Primary Assembly 83347321 na HG03654#2#h2tg000010l assembled-molecule 19 Chromosome CM086864.1 <> na Primary Assembly 61766265 na HG03654#2#h2tg000027l assembled-molecule 20 Chromosome CM086865.1 <> na Primary Assembly 65355854 na HG03654#2#h2tg000004l unplaced-scaffold na na JBHDTO010000002.1 <> na Primary Assembly 91538446 na HG03654#2#h2tg000009l unplaced-scaffold na na JBHDTO010000005.1 <> na Primary Assembly 107812974 na HG03654#2#h2tg000015l unplaced-scaffold na na JBHDTO010000009.1 <> na Primary Assembly 96353732 na HG03654#2#h2tg000019l unplaced-scaffold na na JBHDTO010000011.1 <> na Primary Assembly 21270400 na HG03654#2#h2tg000023l unplaced-scaffold na na JBHDTO010000014.1 <> na Primary Assembly 40041963 na HG03654#2#h2tg000024l unplaced-scaffold na na JBHDTO010000015.1 <> na Primary Assembly 5794946 na HG03654#2#h2tg000026l unplaced-scaffold na na JBHDTO010000016.1 <> na Primary Assembly 81229690 na HG03654#2#h2tg000028l unplaced-scaffold na na JBHDTO010000018.1 <> na Primary Assembly 61885812 na HG03654#2#h2tg000029l unplaced-scaffold na na JBHDTO010000019.1 <> na Primary Assembly 6178943 na HG03654#2#h2tg000040l unplaced-scaffold na na JBHDTO010000020.1 <> na Primary Assembly 533119 na HG03654#2#h2tg000046l unplaced-scaffold na na JBHDTO010000021.1 <> na Primary Assembly 202098 na HG03654#2#h2tg000050l unplaced-scaffold na na JBHDTO010000022.1 <> na Primary Assembly 191003 na HG03654#2#h2tg000051l unplaced-scaffold na na JBHDTO010000023.1 <> na Primary Assembly 189772 na HG03654#2#h2tg000052l unplaced-scaffold na na JBHDTO010000024.1 <> na Primary Assembly 448569 na HG03654#2#h2tg000053l unplaced-scaffold na na JBHDTO010000025.1 <> na Primary Assembly 606803 na HG03654#2#h2tg000058l unplaced-scaffold na na JBHDTO010000026.1 <> na Primary Assembly 337102 na HG03654#2#h2tg000067l unplaced-scaffold na na JBHDTO010000027.1 <> na Primary Assembly 76844 na HG03654#2#h2tg000073l unplaced-scaffold na na JBHDTO010000028.1 <> na Primary Assembly 98347 na HG03654#2#h2tg000079l unplaced-scaffold na na JBHDTO010000029.1 <> na Primary Assembly 59682 na HG03654#2#h2tg000081l unplaced-scaffold na na JBHDTO010000030.1 <> na Primary Assembly 244886 na HG03654#2#h2tg000082l unplaced-scaffold na na JBHDTO010000031.1 <> na Primary Assembly 139259 na HG03654#2#h2tg000091l unplaced-scaffold na na JBHDTO010000032.1 <> na Primary Assembly 56723 na HG03654#2#h2tg000093l unplaced-scaffold na na JBHDTO010000033.1 <> na Primary Assembly 92974 na HG03654#2#h2tg000096l unplaced-scaffold na na JBHDTO010000034.1 <> na Primary Assembly 266566 na HG03654#2#h2tg000098l unplaced-scaffold na na JBHDTO010000035.1 <> na Primary Assembly 179726 na HG03654#2#h2tg000100l unplaced-scaffold na na JBHDTO010000036.1 <> na Primary Assembly 139098 na HG03654#2#h2tg000106l unplaced-scaffold na na JBHDTO010000037.1 <> na Primary Assembly 238066 na HG03654#2#h2tg000108l unplaced-scaffold na na JBHDTO010000038.1 <> na Primary Assembly 54515 na HG03654#2#h2tg000112l unplaced-scaffold na na JBHDTO010000039.1 <> na Primary Assembly 81442 na HG03654#2#h2tg000113l unplaced-scaffold na na JBHDTO010000040.1 <> na Primary Assembly 66293 na HG03654#2#h2tg000126l unplaced-scaffold na na JBHDTO010000041.1 <> na Primary Assembly 73833 na HG03654#2#h2tg000127l unplaced-scaffold na na JBHDTO010000042.1 <> na Primary Assembly 68754 na HG03654#2#h2tg000002l unplaced-scaffold na na JBHDTO010000043.1 <> na Primary Assembly 70667213 na HG03654#2#h2tg000003l unplaced-scaffold na na JBHDTO010000044.1 <> na Primary Assembly 155145930 na HG03654#2#h2tg000006l unplaced-scaffold na na JBHDTO010000045.1 <> na Primary Assembly 171941582 na HG03654#2#h2tg000007l unplaced-scaffold na na JBHDTO010000046.1 <> na Primary Assembly 127886683 na HG03654#2#h2tg000011l unplaced-scaffold na na JBHDTO010000047.1 <> na Primary Assembly 103882055 na HG03654#2#h2tg000014l unplaced-scaffold na na JBHDTO010000048.1 <> na Primary Assembly 93346924 na HG03654#2#h2tg000016l unplaced-scaffold na na JBHDTO010000049.1 <> na Primary Assembly 17693524 na HG03654#2#h2tg000025l unplaced-scaffold na na JBHDTO010000052.1 <> na Primary Assembly 38907188 na HG03654#2#h2tg000030l unplaced-scaffold na na JBHDTO010000053.1 <> na Primary Assembly 3691315 na HG03654#2#h2tg000031l unplaced-scaffold na na JBHDTO010000054.1 <> na Primary Assembly 9546834 na HG03654#2#h2tg000032l unplaced-scaffold na na JBHDTO010000055.1 <> na Primary Assembly 2639824 na HG03654#2#h2tg000033l unplaced-scaffold na na JBHDTO010000056.1 <> na Primary Assembly 2536253 na HG03654#2#h2tg000034l unplaced-scaffold na na JBHDTO010000057.1 <> na Primary Assembly 546095 na HG03654#2#h2tg000035l unplaced-scaffold na na JBHDTO010000058.1 <> na Primary Assembly 97470377 na HG03654#2#h2tg000036l unplaced-scaffold na na JBHDTO010000059.1 <> na Primary Assembly 2894948 na HG03654#2#h2tg000038l unplaced-scaffold na na JBHDTO010000060.1 <> na Primary Assembly 88227 na HG03654#2#h2tg000039l unplaced-scaffold na na JBHDTO010000061.1 <> na Primary Assembly 141737 na HG03654#2#h2tg000041l unplaced-scaffold na na JBHDTO010000062.1 <> na Primary Assembly 427041 na HG03654#2#h2tg000042l unplaced-scaffold na na JBHDTO010000063.1 <> na Primary Assembly 1828991 na HG03654#2#h2tg000043l unplaced-scaffold na na JBHDTO010000064.1 <> na Primary Assembly 1057951 na HG03654#2#h2tg000044l unplaced-scaffold na na JBHDTO010000065.1 <> na Primary Assembly 635596 na HG03654#2#h2tg000045l unplaced-scaffold na na JBHDTO010000066.1 <> na Primary Assembly 1029854 na HG03654#2#h2tg000047l unplaced-scaffold na na JBHDTO010000067.1 <> na Primary Assembly 2635556 na HG03654#2#h2tg000048l unplaced-scaffold na na JBHDTO010000068.1 <> na Primary Assembly 1192574 na HG03654#2#h2tg000049l unplaced-scaffold na na JBHDTO010000069.1 <> na Primary Assembly 890633 na HG03654#2#h2tg000055l unplaced-scaffold na na JBHDTO010000070.1 <> na Primary Assembly 1301040 na HG03654#2#h2tg000056l unplaced-scaffold na na JBHDTO010000071.1 <> na Primary Assembly 738557 na HG03654#2#h2tg000057l unplaced-scaffold na na JBHDTO010000072.1 <> na Primary Assembly 50878 na HG03654#2#h2tg000059l unplaced-scaffold na na JBHDTO010000073.1 <> na Primary Assembly 733392 na HG03654#2#h2tg000060l unplaced-scaffold na na JBHDTO010000074.1 <> na Primary Assembly 161836 na HG03654#2#h2tg000061l unplaced-scaffold na na JBHDTO010000075.1 <> na Primary Assembly 413735 na HG03654#2#h2tg000062l unplaced-scaffold na na JBHDTO010000076.1 <> na Primary Assembly 240112 na HG03654#2#h2tg000063l unplaced-scaffold na na JBHDTO010000077.1 <> na Primary Assembly 145084 na HG03654#2#h2tg000064l unplaced-scaffold na na JBHDTO010000078.1 <> na Primary Assembly 638615 na HG03654#2#h2tg000065l unplaced-scaffold na na JBHDTO010000079.1 <> na Primary Assembly 351646 na HG03654#2#h2tg000066l unplaced-scaffold na na JBHDTO010000080.1 <> na Primary Assembly 256773 na HG03654#2#h2tg000071l unplaced-scaffold na na JBHDTO010000081.1 <> na Primary Assembly 75889 na HG03654#2#h2tg000075l unplaced-scaffold na na JBHDTO010000082.1 <> na Primary Assembly 80347 na HG03654#2#h2tg000076l unplaced-scaffold na na JBHDTO010000083.1 <> na Primary Assembly 101068 na HG03654#2#h2tg000077l unplaced-scaffold na na JBHDTO010000084.1 <> na Primary Assembly 240472 na HG03654#2#h2tg000080l unplaced-scaffold na na JBHDTO010000085.1 <> na Primary Assembly 94193 na HG03654#2#h2tg000085l unplaced-scaffold na na JBHDTO010000086.1 <> na Primary Assembly 114364 na HG03654#2#h2tg000086l unplaced-scaffold na na JBHDTO010000087.1 <> na Primary Assembly 181752 na HG03654#2#h2tg000088l unplaced-scaffold na na JBHDTO010000088.1 <> na Primary Assembly 67276 na HG03654#2#h2tg000092l unplaced-scaffold na na JBHDTO010000089.1 <> na Primary Assembly 83400 na HG03654#2#h2tg000095l unplaced-scaffold na na JBHDTO010000090.1 <> na Primary Assembly 64301 na HG03654#2#h2tg000101l unplaced-scaffold na na JBHDTO010000091.1 <> na Primary Assembly 219821 na HG03654#2#h2tg000102l unplaced-scaffold na na JBHDTO010000092.1 <> na Primary Assembly 128549 na HG03654#2#h2tg000104l unplaced-scaffold na na JBHDTO010000093.1 <> na Primary Assembly 226026 na HG03654#2#h2tg000105l unplaced-scaffold na na JBHDTO010000094.1 <> na Primary Assembly 54549 na HG03654#2#h2tg000114l unplaced-scaffold na na JBHDTO010000095.1 <> na Primary Assembly 78415 na HG03654#2#h2tg000120l unplaced-scaffold na na JBHDTO010000096.1 <> na Primary Assembly 73357 na HG03654#2#h2tg000121l unplaced-scaffold na na JBHDTO010000097.1 <> na Primary Assembly 105749 na HG03654#2#h2tg000122l unplaced-scaffold na na JBHDTO010000098.1 <> na Primary Assembly 109819 na HG03654#2#h2tg000123l unplaced-scaffold na na JBHDTO010000099.1 <> na Primary Assembly 63458 na HG03654#2#h2tg000139l unplaced-scaffold na na JBHDTO010000100.1 <> na Primary Assembly 63710 na HG03654#2#ptg000001l_rc_rotated unlocalized-scaffold MT Mitochondrion JBHDTO010000101.1 <> na non-nuclear 16569 na