# Assembly name: HG04199_mat_hprc_f2 # Organism name: Homo sapiens (human) # Isolate: HG04199 # Sex: male # Taxid: 9606 # BioSample: SAMN26267389 # BioProject: PRJNA1156120 # Submitter: UCSC Genomics Institute # Date: 2024-09-19 # Assembly type: haploid (maternal haplotype of diploid) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JBHDTI01 # Assembly method: Hifiasm v. 0.19.7 # Expected final version: no # Genome coverage: 68x # Sequencing technology: PacBio; Oxford Nanopore # GenBank assembly accession: GCA_042029385.1 # Linked assembly: GCA_042030015.1 (paternal haplotype of diploid) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_042029415.1 Primary Assembly ## GCA_042029505.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name HG04199#2#h2tg000016l assembled-molecule 1 Chromosome CM086789.1 <> na Primary Assembly 247454678 na HG04199#2#h2tg000019l assembled-molecule 2 Chromosome CM086790.1 <> na Primary Assembly 242936974 na HG04199#2#h2tg000007l assembled-molecule 5 Chromosome CM086791.1 <> na Primary Assembly 181441171 na HG04199#2#h2tg000012l assembled-molecule 9 Chromosome CM086792.1 <> na Primary Assembly 139412681 na HG04199#2#h2tg000011l assembled-molecule 10 Chromosome CM086793.1 <> na Primary Assembly 135694345 na HG04199#2#h2tg000008l assembled-molecule 11 Chromosome CM086794.1 <> na Primary Assembly 137661311 na HG04199#2#h2tg000003l assembled-molecule 12 Chromosome CM086795.1 <> na Primary Assembly 134126908 na HG04199#2#h2tg000014l assembled-molecule 17 Chromosome CM086796.1 <> na Primary Assembly 83607182 na HG04199#2#h2tg000013l assembled-molecule 19 Chromosome CM086797.1 <> na Primary Assembly 61198667 na HG04199#2#h2tg000018l assembled-molecule 20 Chromosome CM086798.1 <> na Primary Assembly 66423944 na HG04199#2#h2tg000026l assembled-molecule X Chromosome CM086799.1 <> na Primary Assembly 154941626 na HG04199#2#h2tg000004l unplaced-scaffold na na JBHDTI010000002.1 <> na Primary Assembly 191327106 na HG04199#2#h2tg000005l unplaced-scaffold na na JBHDTI010000003.1 <> na Primary Assembly 201403403 na HG04199#2#h2tg000009l unplaced-scaffold na na JBHDTI010000005.1 <> na Primary Assembly 61396260 na HG04199#2#h2tg000015l unplaced-scaffold na na JBHDTI010000009.1 <> na Primary Assembly 91986247 na HG04199#2#h2tg000017l unplaced-scaffold na na JBHDTI010000011.1 <> na Primary Assembly 144520206 na HG04199#2#h2tg000020l unplaced-scaffold na na JBHDTI010000013.1 <> na Primary Assembly 41899562 na HG04199#2#h2tg000021l unplaced-scaffold na na JBHDTI010000014.1 <> na Primary Assembly 104599198 na HG04199#2#h2tg000022l unplaced-scaffold na na JBHDTI010000015.1 <> na Primary Assembly 60114731 na HG04199#2#h2tg000024l unplaced-scaffold na na JBHDTI010000016.1 <> na Primary Assembly 89592212 na HG04199#2#h2tg000028l unplaced-scaffold na na JBHDTI010000017.1 <> na Primary Assembly 1911348 na HG04199#2#h2tg000032l unplaced-scaffold na na JBHDTI010000018.1 <> na Primary Assembly 116034 na HG04199#2#h2tg000033l unplaced-scaffold na na JBHDTI010000019.1 <> na Primary Assembly 1002325 na HG04199#2#h2tg000036l unplaced-scaffold na na JBHDTI010000020.1 <> na Primary Assembly 57780 na HG04199#2#h2tg000038l unplaced-scaffold na na JBHDTI010000021.1 <> na Primary Assembly 142740 na HG04199#2#h2tg000039l unplaced-scaffold na na JBHDTI010000022.1 <> na Primary Assembly 210384 na HG04199#2#h2tg000041l unplaced-scaffold na na JBHDTI010000023.1 <> na Primary Assembly 62171 na HG04199#2#h2tg000043l unplaced-scaffold na na JBHDTI010000024.1 <> na Primary Assembly 58025 na HG04199#2#h2tg000046l unplaced-scaffold na na JBHDTI010000025.1 <> na Primary Assembly 74801 na HG04199#2#h2tg000048l unplaced-scaffold na na JBHDTI010000026.1 <> na Primary Assembly 391587 na HG04199#2#h2tg000051l unplaced-scaffold na na JBHDTI010000027.1 <> na Primary Assembly 204049 na HG04199#2#h2tg000052l unplaced-scaffold na na JBHDTI010000028.1 <> na Primary Assembly 74299 na HG04199#2#h2tg000055l unplaced-scaffold na na JBHDTI010000029.1 <> na Primary Assembly 310531 na HG04199#2#h2tg000057l unplaced-scaffold na na JBHDTI010000030.1 <> na Primary Assembly 134956 na HG04199#2#h2tg000059l unplaced-scaffold na na JBHDTI010000031.1 <> na Primary Assembly 86411 na HG04199#2#h2tg000063l unplaced-scaffold na na JBHDTI010000032.1 <> na Primary Assembly 107481 na HG04199#2#h2tg000067l unplaced-scaffold na na JBHDTI010000033.1 <> na Primary Assembly 55295 na HG04199#2#h2tg000068l unplaced-scaffold na na JBHDTI010000034.1 <> na Primary Assembly 63299 na HG04199#2#h2tg000069l unplaced-scaffold na na JBHDTI010000035.1 <> na Primary Assembly 150702 na HG04199#2#h2tg000071l unplaced-scaffold na na JBHDTI010000036.1 <> na Primary Assembly 167083 na HG04199#2#h2tg000074l unplaced-scaffold na na JBHDTI010000037.1 <> na Primary Assembly 87557 na HG04199#2#h2tg000075l unplaced-scaffold na na JBHDTI010000038.1 <> na Primary Assembly 128681 na HG04199#2#h2tg000078l unplaced-scaffold na na JBHDTI010000039.1 <> na Primary Assembly 60269 na HG04199#2#h2tg000080l unplaced-scaffold na na JBHDTI010000040.1 <> na Primary Assembly 88829 na HG04199#2#h2tg000082l unplaced-scaffold na na JBHDTI010000041.1 <> na Primary Assembly 58051 na HG04199#2#h2tg000088l unplaced-scaffold na na JBHDTI010000042.1 <> na Primary Assembly 212290 na HG04199#2#h2tg000093l unplaced-scaffold na na JBHDTI010000043.1 <> na Primary Assembly 68571 na HG04199#2#h2tg000102l unplaced-scaffold na na JBHDTI010000044.1 <> na Primary Assembly 132377 na HG04199#2#h2tg000105l unplaced-scaffold na na JBHDTI010000045.1 <> na Primary Assembly 52289 na HG04199#2#h2tg000001l unplaced-scaffold na na JBHDTI010000046.1 <> na Primary Assembly 96820926 na HG04199#2#h2tg000002l unplaced-scaffold na na JBHDTI010000047.1 <> na Primary Assembly 160276211 na HG04199#2#h2tg000006l unplaced-scaffold na na JBHDTI010000048.1 <> na Primary Assembly 3969770 na HG04199#2#h2tg000010l unplaced-scaffold na na JBHDTI010000050.1 <> na Primary Assembly 111621123 na HG04199#2#h2tg000023l unplaced-scaffold na na JBHDTI010000053.1 <> na Primary Assembly 45211011 na HG04199#2#h2tg000025l unplaced-scaffold na na JBHDTI010000054.1 <> na Primary Assembly 18604318 na HG04199#2#h2tg000029l unplaced-scaffold na na JBHDTI010000056.1 <> na Primary Assembly 3786709 na HG04199#2#h2tg000031l unplaced-scaffold na na JBHDTI010000057.1 <> na Primary Assembly 211939 na HG04199#2#h2tg000034l unplaced-scaffold na na JBHDTI010000058.1 <> na Primary Assembly 1444131 na HG04199#2#h2tg000037l unplaced-scaffold na na JBHDTI010000059.1 <> na Primary Assembly 1848044 na HG04199#2#h2tg000040l unplaced-scaffold na na JBHDTI010000060.1 <> na Primary Assembly 774209 na HG04199#2#h2tg000042l unplaced-scaffold na na JBHDTI010000061.1 <> na Primary Assembly 2030737 na HG04199#2#h2tg000044l unplaced-scaffold na na JBHDTI010000062.1 <> na Primary Assembly 974469 na HG04199#2#h2tg000045l unplaced-scaffold na na JBHDTI010000063.1 <> na Primary Assembly 115857 na HG04199#2#h2tg000047l unplaced-scaffold na na JBHDTI010000064.1 <> na Primary Assembly 185157 na HG04199#2#h2tg000049l unplaced-scaffold na na JBHDTI010000065.1 <> na Primary Assembly 143971 na HG04199#2#h2tg000050l unplaced-scaffold na na JBHDTI010000066.1 <> na Primary Assembly 99506 na HG04199#2#h2tg000053l unplaced-scaffold na na JBHDTI010000067.1 <> na Primary Assembly 273703 na HG04199#2#h2tg000054l unplaced-scaffold na na JBHDTI010000068.1 <> na Primary Assembly 225887 na HG04199#2#h2tg000060l unplaced-scaffold na na JBHDTI010000069.1 <> na Primary Assembly 60861 na HG04199#2#h2tg000061l unplaced-scaffold na na JBHDTI010000070.1 <> na Primary Assembly 128930 na HG04199#2#h2tg000064l unplaced-scaffold na na JBHDTI010000071.1 <> na Primary Assembly 105574 na HG04199#2#h2tg000066l unplaced-scaffold na na JBHDTI010000072.1 <> na Primary Assembly 70294 na HG04199#2#h2tg000072l unplaced-scaffold na na JBHDTI010000073.1 <> na Primary Assembly 149529 na HG04199#2#h2tg000073l unplaced-scaffold na na JBHDTI010000074.1 <> na Primary Assembly 63071 na HG04199#2#h2tg000079l unplaced-scaffold na na JBHDTI010000075.1 <> na Primary Assembly 53739 na HG04199#2#h2tg000081l unplaced-scaffold na na JBHDTI010000076.1 <> na Primary Assembly 258511 na HG04199#2#h2tg000083l unplaced-scaffold na na JBHDTI010000077.1 <> na Primary Assembly 66043 na HG04199#2#h2tg000084l unplaced-scaffold na na JBHDTI010000078.1 <> na Primary Assembly 113306 na HG04199#2#h2tg000085l unplaced-scaffold na na JBHDTI010000079.1 <> na Primary Assembly 59805 na HG04199#2#h2tg000091l unplaced-scaffold na na JBHDTI010000080.1 <> na Primary Assembly 52138 na HG04199#2#h2tg000095l unplaced-scaffold na na JBHDTI010000081.1 <> na Primary Assembly 68963 na HG04199#2#h2tg000118l unplaced-scaffold na na JBHDTI010000082.1 <> na Primary Assembly 55689 na HG04199#2#ptg000001l_rotated unlocalized-scaffold MT Mitochondrion JBHDTI010000083.1 <> na non-nuclear 16569 na