# Assembly name: HG00642_pat_hprc_f2 # Organism name: Homo sapiens (human) # Isolate: HG00642 # Sex: male # Taxid: 9606 # BioSample: SAMN26267378 # BioProject: PRJNA1156148 # Submitter: UCSC Genomics Institute # Date: 2024-09-19 # Assembly type: haploid (paternal haplotype of diploid) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JBHDST01 # Assembly method: Hifiasm v. 0.19.7 # Expected final version: no # Genome coverage: 65x # Sequencing technology: PacBio; Oxford Nanopore # GenBank assembly accession: GCA_042028805.1 # Linked assembly: GCA_042028155.1 (maternal haplotype of diploid) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_042028825.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name HG00642#1#h1tg000002l assembled-molecule 5 Chromosome CM086610.1 <> na Primary Assembly 186782361 na HG00642#1#h1tg000016l assembled-molecule 7 Chromosome CM086611.1 <> na Primary Assembly 161391533 na HG00642#1#h1tg000028l assembled-molecule 11 Chromosome CM086612.1 <> na Primary Assembly 134618650 na HG00642#1#h1tg000007l assembled-molecule 12 Chromosome CM086613.1 <> na Primary Assembly 133622060 na HG00642#1#h1tg000015l assembled-molecule 16 Chromosome CM086614.1 <> na Primary Assembly 91720809 na HG00642#1#h1tg000005l assembled-molecule 19 Chromosome CM086615.1 <> na Primary Assembly 60360452 na HG00642#1#h1tg000014l assembled-molecule 20 Chromosome CM086616.1 <> na Primary Assembly 66262364 na HG00642#1#h1tg000004l assembled-molecule Y Chromosome CM086617.1 <> na Primary Assembly 38169611 na HG00642#1#h1tg000001l unplaced-scaffold na na JBHDST010000001.1 <> na Primary Assembly 104115872 na HG00642#1#h1tg000003l unplaced-scaffold na na JBHDST010000002.1 <> na Primary Assembly 240581469 na HG00642#1#h1tg000008l unplaced-scaffold na na JBHDST010000003.1 <> na Primary Assembly 97087789 na HG00642#1#h1tg000010l unplaced-scaffold na na JBHDST010000004.1 <> na Primary Assembly 101239737 na HG00642#1#h1tg000011l unplaced-scaffold na na JBHDST010000005.1 <> na Primary Assembly 135432669 na HG00642#1#h1tg000013l unplaced-scaffold na na JBHDST010000006.1 <> na Primary Assembly 62154958 na HG00642#1#h1tg000017l unplaced-scaffold na na JBHDST010000009.1 <> na Primary Assembly 172467535 na HG00642#1#h1tg000018l unplaced-scaffold na na JBHDST010000010.1 <> na Primary Assembly 191917583 na HG00642#1#h1tg000019l unplaced-scaffold na na JBHDST010000011.1 <> na Primary Assembly 49533278 na HG00642#1#h1tg000020l unplaced-scaffold na na JBHDST010000012.1 <> na Primary Assembly 39928684 na HG00642#1#h1tg000022l unplaced-scaffold na na JBHDST010000013.1 <> na Primary Assembly 62035118 na HG00642#1#h1tg000023l unplaced-scaffold na na JBHDST010000014.1 <> na Primary Assembly 112201187 na HG00642#1#h1tg000024l unplaced-scaffold na na JBHDST010000015.1 <> na Primary Assembly 44688122 na HG00642#1#h1tg000025l unplaced-scaffold na na JBHDST010000016.1 <> na Primary Assembly 85784126 na HG00642#1#h1tg000027l unplaced-scaffold na na JBHDST010000017.1 <> na Primary Assembly 23484082 na HG00642#1#h1tg000030l unplaced-scaffold na na JBHDST010000018.1 <> na Primary Assembly 826312 na HG00642#1#h1tg000033l unplaced-scaffold na na JBHDST010000019.1 <> na Primary Assembly 2079603 na HG00642#1#h1tg000035l unplaced-scaffold na na JBHDST010000020.1 <> na Primary Assembly 1107713 na HG00642#1#h1tg000039l unplaced-scaffold na na JBHDST010000021.1 <> na Primary Assembly 189093 na HG00642#1#h1tg000041l unplaced-scaffold na na JBHDST010000022.1 <> na Primary Assembly 401512 na HG00642#1#h1tg000044l unplaced-scaffold na na JBHDST010000023.1 <> na Primary Assembly 169614 na HG00642#1#h1tg000045l unplaced-scaffold na na JBHDST010000024.1 <> na Primary Assembly 60837 na HG00642#1#h1tg000046l unplaced-scaffold na na JBHDST010000025.1 <> na Primary Assembly 91891 na HG00642#1#h1tg000047l unplaced-scaffold na na JBHDST010000026.1 <> na Primary Assembly 78699 na HG00642#1#h1tg000051l unplaced-scaffold na na JBHDST010000027.1 <> na Primary Assembly 84624 na HG00642#1#h1tg000055l unplaced-scaffold na na JBHDST010000028.1 <> na Primary Assembly 83836 na HG00642#1#h1tg000060l unplaced-scaffold na na JBHDST010000029.1 <> na Primary Assembly 60351 na HG00642#1#h1tg000061l unplaced-scaffold na na JBHDST010000030.1 <> na Primary Assembly 56514 na HG00642#1#h1tg000065l unplaced-scaffold na na JBHDST010000031.1 <> na Primary Assembly 184881 na HG00642#1#h1tg000075l unplaced-scaffold na na JBHDST010000032.1 <> na Primary Assembly 69683 na HG00642#1#h1tg000085l unplaced-scaffold na na JBHDST010000033.1 <> na Primary Assembly 193399 na HG00642#1#h1tg000087l unplaced-scaffold na na JBHDST010000034.1 <> na Primary Assembly 370305 na HG00642#1#h1tg000006l unplaced-scaffold na na JBHDST010000038.1 <> na Primary Assembly 108500694 na HG00642#1#h1tg000009l unplaced-scaffold na na JBHDST010000040.1 <> na Primary Assembly 13768860 na HG00642#1#h1tg000012l unplaced-scaffold na na JBHDST010000041.1 <> na Primary Assembly 200460096 na HG00642#1#h1tg000021l unplaced-scaffold na na JBHDST010000043.1 <> na Primary Assembly 130332752 na HG00642#1#h1tg000026l unplaced-scaffold na na JBHDST010000044.1 <> na Primary Assembly 23184466 na HG00642#1#h1tg000029l unplaced-scaffold na na JBHDST010000046.1 <> na Primary Assembly 1126688 na HG00642#1#h1tg000031l unplaced-scaffold na na JBHDST010000047.1 <> na Primary Assembly 19125529 na HG00642#1#h1tg000032l unplaced-scaffold na na JBHDST010000048.1 <> na Primary Assembly 4150988 na HG00642#1#h1tg000034l unplaced-scaffold na na JBHDST010000049.1 <> na Primary Assembly 2214484 na HG00642#1#h1tg000036l unplaced-scaffold na na JBHDST010000050.1 <> na Primary Assembly 447166 na HG00642#1#h1tg000037l unplaced-scaffold na na JBHDST010000051.1 <> na Primary Assembly 214426 na HG00642#1#h1tg000038l unplaced-scaffold na na JBHDST010000052.1 <> na Primary Assembly 398790 na HG00642#1#h1tg000040l unplaced-scaffold na na JBHDST010000053.1 <> na Primary Assembly 317763 na HG00642#1#h1tg000043l unplaced-scaffold na na JBHDST010000054.1 <> na Primary Assembly 257817 na HG00642#1#h1tg000048l unplaced-scaffold na na JBHDST010000055.1 <> na Primary Assembly 52030 na HG00642#1#h1tg000052l unplaced-scaffold na na JBHDST010000056.1 <> na Primary Assembly 102929 na HG00642#1#h1tg000054l unplaced-scaffold na na JBHDST010000057.1 <> na Primary Assembly 100246 na HG00642#1#h1tg000056l unplaced-scaffold na na JBHDST010000058.1 <> na Primary Assembly 74381 na HG00642#1#h1tg000058l unplaced-scaffold na na JBHDST010000059.1 <> na Primary Assembly 55568 na HG00642#1#h1tg000059l unplaced-scaffold na na JBHDST010000060.1 <> na Primary Assembly 131193 na HG00642#1#h1tg000070l unplaced-scaffold na na JBHDST010000061.1 <> na Primary Assembly 143747 na HG00642#1#h1tg000071l unplaced-scaffold na na JBHDST010000062.1 <> na Primary Assembly 122174 na HG00642#1#h1tg000073l unplaced-scaffold na na JBHDST010000063.1 <> na Primary Assembly 94567 na HG00642#1#h1tg000074l unplaced-scaffold na na JBHDST010000064.1 <> na Primary Assembly 61660 na HG00642#1#h1tg000076l unplaced-scaffold na na JBHDST010000065.1 <> na Primary Assembly 113817 na HG00642#1#h1tg000078l unplaced-scaffold na na JBHDST010000066.1 <> na Primary Assembly 50558 na HG00642#1#h1tg000090l unplaced-scaffold na na JBHDST010000067.1 <> na Primary Assembly 50992 na HG00642#1#h1tg000094l unplaced-scaffold na na JBHDST010000068.1 <> na Primary Assembly 70073 na HG00642#1#h1tg000095l unplaced-scaffold na na JBHDST010000069.1 <> na Primary Assembly 54455 na