# Assembly name: HG00609_pat_hprc_f2 # Organism name: Homo sapiens (human) # Isolate: HG00609 # Sex: male # Taxid: 9606 # BioSample: SAMN26237492 # BioProject: PRJNA1156136 # Submitter: UCSC Genomics Institute # Date: 2024-09-19 # Assembly type: haploid (paternal haplotype of diploid) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JBHDRX01 # Assembly method: Hifiasm v. 0.19.7 # Expected final version: no # Genome coverage: 69x # Sequencing technology: PacBio; Oxford Nanopore # GenBank assembly accession: GCA_042027545.1 # Linked assembly: GCA_042027095.1 (maternal haplotype of diploid) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_042027575.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name HG00609#1#h1tg000003l assembled-molecule 1 Chromosome CM086346.1 <> na Primary Assembly 249686438 na HG00609#1#h1tg000001l assembled-molecule 2 Chromosome CM086347.1 <> na Primary Assembly 242386555 na HG00609#1#h1tg000007l assembled-molecule 3 Chromosome CM086348.1 <> na Primary Assembly 201743461 na HG00609#1#h1tg000018l assembled-molecule 4 Chromosome CM086349.1 <> na Primary Assembly 191462046 na HG00609#1#h1tg000014l assembled-molecule 5 Chromosome CM086350.1 <> na Primary Assembly 183358550 na HG00609#1#h1tg000009l assembled-molecule 6 Chromosome CM086351.1 <> na Primary Assembly 171905637 na HG00609#1#h1tg000011l assembled-molecule 9 Chromosome CM086352.1 <> na Primary Assembly 135792307 na HG00609#1#h1tg000019l assembled-molecule 10 Chromosome CM086353.1 <> na Primary Assembly 135931890 na HG00609#1#h1tg000005l assembled-molecule 11 Chromosome CM086354.1 <> na Primary Assembly 137300752 na HG00609#1#h1tg000027l assembled-molecule 20 Chromosome CM086355.1 <> na Primary Assembly 67669628 na HG00609#1#h1tg000002l unplaced-scaffold na na JBHDRX010000001.1 <> na Primary Assembly 40463335 na HG00609#1#h1tg000004l unplaced-scaffold na na JBHDRX010000002.1 <> na Primary Assembly 97266874 na HG00609#1#h1tg000006l unplaced-scaffold na na JBHDRX010000003.1 <> na Primary Assembly 87549155 na HG00609#1#h1tg000012l unplaced-scaffold na na JBHDRX010000007.1 <> na Primary Assembly 142518968 na HG00609#1#h1tg000013l unplaced-scaffold na na JBHDRX010000008.1 <> na Primary Assembly 61636315 na HG00609#1#h1tg000015l unplaced-scaffold na na JBHDRX010000009.1 <> na Primary Assembly 83307518 na HG00609#1#h1tg000016l unplaced-scaffold na na JBHDRX010000010.1 <> na Primary Assembly 119858404 na HG00609#1#h1tg000017l unplaced-scaffold na na JBHDRX010000011.1 <> na Primary Assembly 103573530 na HG00609#1#h1tg000021l unplaced-scaffold na na JBHDRX010000013.1 <> na Primary Assembly 13935424 na HG00609#1#h1tg000022l unplaced-scaffold na na JBHDRX010000014.1 <> na Primary Assembly 17628304 na HG00609#1#h1tg000023l unplaced-scaffold na na JBHDRX010000015.1 <> na Primary Assembly 17533428 na HG00609#1#h1tg000024l unplaced-scaffold na na JBHDRX010000016.1 <> na Primary Assembly 44472138 na HG00609#1#h1tg000025l unplaced-scaffold na na JBHDRX010000017.1 <> na Primary Assembly 3452315 na HG00609#1#h1tg000026l unplaced-scaffold na na JBHDRX010000018.1 <> na Primary Assembly 34766918 na HG00609#1#h1tg000031l unplaced-scaffold na na JBHDRX010000020.1 <> na Primary Assembly 2856045 na HG00609#1#h1tg000033l unplaced-scaffold na na JBHDRX010000021.1 <> na Primary Assembly 5172887 na HG00609#1#h1tg000045l unplaced-scaffold na na JBHDRX010000022.1 <> na Primary Assembly 2072975 na HG00609#1#h1tg000047l unplaced-scaffold na na JBHDRX010000023.1 <> na Primary Assembly 2259142 na HG00609#1#h1tg000048l unplaced-scaffold na na JBHDRX010000024.1 <> na Primary Assembly 2950503 na HG00609#1#h1tg000052l unplaced-scaffold na na JBHDRX010000025.1 <> na Primary Assembly 229671 na HG00609#1#h1tg000054l unplaced-scaffold na na JBHDRX010000026.1 <> na Primary Assembly 231610 na HG00609#1#h1tg000061l unplaced-scaffold na na JBHDRX010000027.1 <> na Primary Assembly 70916 na HG00609#1#h1tg000067l unplaced-scaffold na na JBHDRX010000028.1 <> na Primary Assembly 81942 na HG00609#1#h1tg000069l unplaced-scaffold na na JBHDRX010000029.1 <> na Primary Assembly 76225 na HG00609#1#h1tg000070l unplaced-scaffold na na JBHDRX010000030.1 <> na Primary Assembly 96305 na HG00609#1#h1tg000075l unplaced-scaffold na na JBHDRX010000031.1 <> na Primary Assembly 268646 na HG00609#1#h1tg000085l unplaced-scaffold na na JBHDRX010000032.1 <> na Primary Assembly 118437 na HG00609#1#h1tg000086l unplaced-scaffold na na JBHDRX010000033.1 <> na Primary Assembly 55944 na HG00609#1#h1tg000087l unplaced-scaffold na na JBHDRX010000034.1 <> na Primary Assembly 170935 na HG00609#1#h1tg000088l unplaced-scaffold na na JBHDRX010000035.1 <> na Primary Assembly 70322 na HG00609#1#h1tg000089l unplaced-scaffold na na JBHDRX010000036.1 <> na Primary Assembly 65802 na HG00609#1#h1tg000090l unplaced-scaffold na na JBHDRX010000037.1 <> na Primary Assembly 126065 na HG00609#1#h1tg000093l unplaced-scaffold na na JBHDRX010000038.1 <> na Primary Assembly 115190 na HG00609#1#h1tg000096l unplaced-scaffold na na JBHDRX010000039.1 <> na Primary Assembly 65580 na HG00609#1#h1tg000100l unplaced-scaffold na na JBHDRX010000040.1 <> na Primary Assembly 159380 na HG00609#1#h1tg000103l unplaced-scaffold na na JBHDRX010000041.1 <> na Primary Assembly 102840 na HG00609#1#h1tg000104l unplaced-scaffold na na JBHDRX010000042.1 <> na Primary Assembly 57486 na HG00609#1#h1tg000118l unplaced-scaffold na na JBHDRX010000043.1 <> na Primary Assembly 110698 na HG00609#1#h1tg000128l unplaced-scaffold na na JBHDRX010000044.1 <> na Primary Assembly 56018 na HG00609#1#h1tg000130l unplaced-scaffold na na JBHDRX010000045.1 <> na Primary Assembly 71493 na HG00609#1#h1tg000167l unplaced-scaffold na na JBHDRX010000046.1 <> na Primary Assembly 57009 na HG00609#1#h1tg000008l unplaced-scaffold na na JBHDRX010000050.1 <> na Primary Assembly 160154969 na HG00609#1#h1tg000010l unplaced-scaffold na na JBHDRX010000051.1 <> na Primary Assembly 70796848 na HG00609#1#h1tg000020l unplaced-scaffold na na JBHDRX010000054.1 <> na Primary Assembly 11324915 na HG00609#1#h1tg000029l unplaced-scaffold na na JBHDRX010000055.1 <> na Primary Assembly 61284851 na HG00609#1#h1tg000030l unplaced-scaffold na na JBHDRX010000056.1 <> na Primary Assembly 2272786 na HG00609#1#h1tg000032l unplaced-scaffold na na JBHDRX010000057.1 <> na Primary Assembly 3233801 na HG00609#1#h1tg000034l unplaced-scaffold na na JBHDRX010000058.1 <> na Primary Assembly 69918 na HG00609#1#h1tg000035l unplaced-scaffold na na JBHDRX010000059.1 <> na Primary Assembly 3332277 na HG00609#1#h1tg000036l unplaced-scaffold na na JBHDRX010000060.1 <> na Primary Assembly 2969116 na HG00609#1#h1tg000037l unplaced-scaffold na na JBHDRX010000061.1 <> na Primary Assembly 3373388 na HG00609#1#h1tg000039l unplaced-scaffold na na JBHDRX010000062.1 <> na Primary Assembly 1079073 na HG00609#1#h1tg000040l unplaced-scaffold na na JBHDRX010000063.1 <> na Primary Assembly 1512143 na HG00609#1#h1tg000041l unplaced-scaffold na na JBHDRX010000064.1 <> na Primary Assembly 4069547 na HG00609#1#h1tg000042l unplaced-scaffold na na JBHDRX010000065.1 <> na Primary Assembly 78991 na HG00609#1#h1tg000043l unplaced-scaffold na na JBHDRX010000066.1 <> na Primary Assembly 208544 na HG00609#1#h1tg000044l unplaced-scaffold na na JBHDRX010000067.1 <> na Primary Assembly 1687052 na HG00609#1#h1tg000046l unplaced-scaffold na na JBHDRX010000068.1 <> na Primary Assembly 53457 na HG00609#1#h1tg000051l unplaced-scaffold na na JBHDRX010000069.1 <> na Primary Assembly 191155 na HG00609#1#h1tg000053l unplaced-scaffold na na JBHDRX010000070.1 <> na Primary Assembly 177542 na HG00609#1#h1tg000055l unplaced-scaffold na na JBHDRX010000071.1 <> na Primary Assembly 160050 na HG00609#1#h1tg000057l unplaced-scaffold na na JBHDRX010000072.1 <> na Primary Assembly 251689 na HG00609#1#h1tg000058l unplaced-scaffold na na JBHDRX010000073.1 <> na Primary Assembly 518315 na HG00609#1#h1tg000060l unplaced-scaffold na na JBHDRX010000074.1 <> na Primary Assembly 174531 na HG00609#1#h1tg000063l unplaced-scaffold na na JBHDRX010000075.1 <> na Primary Assembly 119545 na HG00609#1#h1tg000064l unplaced-scaffold na na JBHDRX010000076.1 <> na Primary Assembly 56263 na HG00609#1#h1tg000066l unplaced-scaffold na na JBHDRX010000077.1 <> na Primary Assembly 465647 na HG00609#1#h1tg000068l unplaced-scaffold na na JBHDRX010000078.1 <> na Primary Assembly 56318 na HG00609#1#h1tg000072l unplaced-scaffold na na JBHDRX010000079.1 <> na Primary Assembly 268476 na HG00609#1#h1tg000073l unplaced-scaffold na na JBHDRX010000080.1 <> na Primary Assembly 56554 na HG00609#1#h1tg000074l unplaced-scaffold na na JBHDRX010000081.1 <> na Primary Assembly 66252 na HG00609#1#h1tg000079l unplaced-scaffold na na JBHDRX010000082.1 <> na Primary Assembly 111752 na HG00609#1#h1tg000080l unplaced-scaffold na na JBHDRX010000083.1 <> na Primary Assembly 65310 na HG00609#1#h1tg000081l unplaced-scaffold na na JBHDRX010000084.1 <> na Primary Assembly 88287 na HG00609#1#h1tg000082l unplaced-scaffold na na JBHDRX010000085.1 <> na Primary Assembly 58023 na HG00609#1#h1tg000092l unplaced-scaffold na na JBHDRX010000086.1 <> na Primary Assembly 54161 na HG00609#1#h1tg000094l unplaced-scaffold na na JBHDRX010000087.1 <> na Primary Assembly 163987 na HG00609#1#h1tg000098l unplaced-scaffold na na JBHDRX010000088.1 <> na Primary Assembly 58756 na HG00609#1#h1tg000102l unplaced-scaffold na na JBHDRX010000089.1 <> na Primary Assembly 145968 na HG00609#1#h1tg000110l unplaced-scaffold na na JBHDRX010000090.1 <> na Primary Assembly 58950 na HG00609#1#h1tg000112l unplaced-scaffold na na JBHDRX010000091.1 <> na Primary Assembly 95125 na HG00609#1#h1tg000115l unplaced-scaffold na na JBHDRX010000092.1 <> na Primary Assembly 52471 na HG00609#1#h1tg000122l unplaced-scaffold na na JBHDRX010000093.1 <> na Primary Assembly 61311 na HG00609#1#h1tg000133l unplaced-scaffold na na JBHDRX010000094.1 <> na Primary Assembly 54708 na