# Assembly name: HG00408_pat_hprc_rel2 # Organism name: Homo sapiens (human) # Isolate: HG00408 # Sex: female # Taxid: 9606 # BioSample: SAMN33621943 # BioProject: PRJNA1153491 # Submitter: UCSC Genomics Institute # Date: 2024-09-11 # Assembly type: haploid (paternal haplotype of diploid) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JBHDVK01 # Assembly method: Hifiasm v. 0.19.7 # Expected final version: no # Genome coverage: 63x # Sequencing technology: PacBio; Oxford Nanopore # GenBank assembly accession: GCA_041900255.1 # Linked assembly: GCA_041900245.1 (maternal haplotype of diploid) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_041900345.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name HG00408#1#h1tg000022l assembled-molecule 2 Chromosome CM085953.1 <> na Primary Assembly 242990533 na HG00408#1#h1tg000011l assembled-molecule 3 Chromosome CM085954.1 <> na Primary Assembly 201061422 na HG00408#1#h1tg000005l assembled-molecule 5 Chromosome CM085955.1 <> na Primary Assembly 183017961 na HG00408#1#h1tg000012l assembled-molecule 6 Chromosome CM085956.1 <> na Primary Assembly 172821162 na HG00408#1#h1tg000027l assembled-molecule 8 Chromosome CM085957.1 <> na Primary Assembly 146077181 na HG00408#1#h1tg000009l assembled-molecule 9 Chromosome CM085958.1 <> na Primary Assembly 133654424 na HG00408#1#h1tg000008l assembled-molecule 11 Chromosome CM085959.1 <> na Primary Assembly 136776016 na HG00408#1#h1tg000017l assembled-molecule 12 Chromosome CM085960.1 <> na Primary Assembly 134954437 na HG00408#1#h1tg000010l assembled-molecule 16 Chromosome CM085961.1 <> na Primary Assembly 91524693 na HG00408#1#h1tg000006l assembled-molecule 18 Chromosome CM085962.1 <> na Primary Assembly 80492734 na HG00408#1#h1tg000028l assembled-molecule 19 Chromosome CM085963.1 <> na Primary Assembly 61061584 na HG00408#1#h1tg000023l assembled-molecule 20 Chromosome CM085964.1 <> na Primary Assembly 65810583 na HG00408#1#h1tg000001l unplaced-scaffold na na JBHDVK010000001.1 <> na Primary Assembly 103422031 na HG00408#1#h1tg000003l unplaced-scaffold na na JBHDVK010000002.1 <> na Primary Assembly 130335100 na HG00408#1#h1tg000013l unplaced-scaffold na na JBHDVK010000007.1 <> na Primary Assembly 109731761 na HG00408#1#h1tg000014l unplaced-scaffold na na JBHDVK010000008.1 <> na Primary Assembly 100955828 na HG00408#1#h1tg000016l unplaced-scaffold na na JBHDVK010000009.1 <> na Primary Assembly 62436899 na HG00408#1#h1tg000018l unplaced-scaffold na na JBHDVK010000011.1 <> na Primary Assembly 42227753 na HG00408#1#h1tg000019l unplaced-scaffold na na JBHDVK010000012.1 <> na Primary Assembly 193627033 na HG00408#1#h1tg000020l unplaced-scaffold na na JBHDVK010000013.1 <> na Primary Assembly 452708 na HG00408#1#h1tg000021l unplaced-scaffold na na JBHDVK010000014.1 <> na Primary Assembly 101022985 na HG00408#1#h1tg000025l unplaced-scaffold na na JBHDVK010000015.1 <> na Primary Assembly 58387571 na HG00408#1#h1tg000029l unplaced-scaffold na na JBHDVK010000018.1 <> na Primary Assembly 41630520 na HG00408#1#h1tg000031l unplaced-scaffold na na JBHDVK010000019.1 <> na Primary Assembly 1974389 na HG00408#1#h1tg000032l unplaced-scaffold na na JBHDVK010000020.1 <> na Primary Assembly 5692624 na HG00408#1#h1tg000034l unplaced-scaffold na na JBHDVK010000021.1 <> na Primary Assembly 6371225 na HG00408#1#h1tg000038l unplaced-scaffold na na JBHDVK010000022.1 <> na Primary Assembly 1740805 na HG00408#1#h1tg000039l unplaced-scaffold na na JBHDVK010000023.1 <> na Primary Assembly 752478 na HG00408#1#h1tg000042l unplaced-scaffold na na JBHDVK010000024.1 <> na Primary Assembly 244002 na HG00408#1#h1tg000043l unplaced-scaffold na na JBHDVK010000025.1 <> na Primary Assembly 123201 na HG00408#1#h1tg000044l unplaced-scaffold na na JBHDVK010000026.1 <> na Primary Assembly 139684 na HG00408#1#h1tg000046l unplaced-scaffold na na JBHDVK010000027.1 <> na Primary Assembly 822719 na HG00408#1#h1tg000053l unplaced-scaffold na na JBHDVK010000028.1 <> na Primary Assembly 131949 na HG00408#1#h1tg000056l unplaced-scaffold na na JBHDVK010000029.1 <> na Primary Assembly 137370 na HG00408#1#h1tg000061l unplaced-scaffold na na JBHDVK010000030.1 <> na Primary Assembly 376577 na HG00408#1#h1tg000063l unplaced-scaffold na na JBHDVK010000031.1 <> na Primary Assembly 417844 na HG00408#1#h1tg000068l unplaced-scaffold na na JBHDVK010000032.1 <> na Primary Assembly 103560 na HG00408#1#h1tg000069l unplaced-scaffold na na JBHDVK010000033.1 <> na Primary Assembly 116298 na HG00408#1#h1tg000070l unplaced-scaffold na na JBHDVK010000034.1 <> na Primary Assembly 57057 na HG00408#1#h1tg000074l unplaced-scaffold na na JBHDVK010000035.1 <> na Primary Assembly 163322 na HG00408#1#h1tg000076l unplaced-scaffold na na JBHDVK010000036.1 <> na Primary Assembly 57848 na HG00408#1#h1tg000080l unplaced-scaffold na na JBHDVK010000037.1 <> na Primary Assembly 81517 na HG00408#1#h1tg000081l unplaced-scaffold na na JBHDVK010000038.1 <> na Primary Assembly 214783 na HG00408#1#h1tg000085l unplaced-scaffold na na JBHDVK010000039.1 <> na Primary Assembly 109093 na HG00408#1#h1tg000086l unplaced-scaffold na na JBHDVK010000040.1 <> na Primary Assembly 434234 na HG00408#1#h1tg000091l unplaced-scaffold na na JBHDVK010000041.1 <> na Primary Assembly 87848 na HG00408#1#h1tg000093l unplaced-scaffold na na JBHDVK010000042.1 <> na Primary Assembly 92295 na HG00408#1#h1tg000094l unplaced-scaffold na na JBHDVK010000043.1 <> na Primary Assembly 120657 na HG00408#1#h1tg000102l unplaced-scaffold na na JBHDVK010000044.1 <> na Primary Assembly 72603 na HG00408#1#h1tg000103l unplaced-scaffold na na JBHDVK010000045.1 <> na Primary Assembly 79842 na HG00408#1#h1tg000105l unplaced-scaffold na na JBHDVK010000046.1 <> na Primary Assembly 189800 na HG00408#1#h1tg000107l unplaced-scaffold na na JBHDVK010000047.1 <> na Primary Assembly 184945 na HG00408#1#h1tg000108l unplaced-scaffold na na JBHDVK010000048.1 <> na Primary Assembly 94541 na HG00408#1#h1tg000114l unplaced-scaffold na na JBHDVK010000049.1 <> na Primary Assembly 82130 na HG00408#1#h1tg000119l unplaced-scaffold na na JBHDVK010000050.1 <> na Primary Assembly 52493 na HG00408#1#h1tg000123l unplaced-scaffold na na JBHDVK010000051.1 <> na Primary Assembly 256409 na HG00408#1#h1tg000131l unplaced-scaffold na na JBHDVK010000052.1 <> na Primary Assembly 199250 na HG00408#1#h1tg000133l unplaced-scaffold na na JBHDVK010000053.1 <> na Primary Assembly 127037 na HG00408#1#h1tg000142l unplaced-scaffold na na JBHDVK010000054.1 <> na Primary Assembly 60588 na HG00408#1#h1tg000150l unplaced-scaffold na na JBHDVK010000055.1 <> na Primary Assembly 81101 na HG00408#1#h1tg000175l unplaced-scaffold na na JBHDVK010000056.1 <> na Primary Assembly 50071 na HG00408#1#h1tg000002l unplaced-scaffold na na JBHDVK010000057.1 <> na Primary Assembly 52179216 na HG00408#1#h1tg000004l unplaced-scaffold na na JBHDVK010000058.1 <> na Primary Assembly 19030031 na HG00408#1#h1tg000007l unplaced-scaffold na na JBHDVK010000060.1 <> na Primary Assembly 136823768 na HG00408#1#h1tg000015l unplaced-scaffold na na JBHDVK010000063.1 <> na Primary Assembly 3461496 na HG00408#1#h1tg000024l unplaced-scaffold na na JBHDVK010000066.1 <> na Primary Assembly 95561981 na HG00408#1#h1tg000026l unplaced-scaffold na na JBHDVK010000067.1 <> na Primary Assembly 103468804 na HG00408#1#h1tg000030l unplaced-scaffold na na JBHDVK010000068.1 <> na Primary Assembly 2924582 na HG00408#1#h1tg000033l unplaced-scaffold na na JBHDVK010000069.1 <> na Primary Assembly 2241677 na HG00408#1#h1tg000035l unplaced-scaffold na na JBHDVK010000070.1 <> na Primary Assembly 4979078 na HG00408#1#h1tg000036l unplaced-scaffold na na JBHDVK010000071.1 <> na Primary Assembly 3996934 na HG00408#1#h1tg000037l unplaced-scaffold na na JBHDVK010000072.1 <> na Primary Assembly 611586 na HG00408#1#h1tg000040l unplaced-scaffold na na JBHDVK010000073.1 <> na Primary Assembly 561760 na HG00408#1#h1tg000041l unplaced-scaffold na na JBHDVK010000074.1 <> na Primary Assembly 425917 na HG00408#1#h1tg000047l unplaced-scaffold na na JBHDVK010000075.1 <> na Primary Assembly 2298234 na HG00408#1#h1tg000048l unplaced-scaffold na na JBHDVK010000076.1 <> na Primary Assembly 225703 na HG00408#1#h1tg000049l unplaced-scaffold na na JBHDVK010000077.1 <> na Primary Assembly 120245 na HG00408#1#h1tg000052l unplaced-scaffold na na JBHDVK010000078.1 <> na Primary Assembly 2292044 na HG00408#1#h1tg000055l unplaced-scaffold na na JBHDVK010000079.1 <> na Primary Assembly 273443 na HG00408#1#h1tg000057l unplaced-scaffold na na JBHDVK010000080.1 <> na Primary Assembly 185775 na HG00408#1#h1tg000058l unplaced-scaffold na na JBHDVK010000081.1 <> na Primary Assembly 1907616 na HG00408#1#h1tg000059l unplaced-scaffold na na JBHDVK010000082.1 <> na Primary Assembly 1073006 na HG00408#1#h1tg000064l unplaced-scaffold na na JBHDVK010000083.1 <> na Primary Assembly 303902 na HG00408#1#h1tg000066l unplaced-scaffold na na JBHDVK010000084.1 <> na Primary Assembly 116565 na HG00408#1#h1tg000072l unplaced-scaffold na na JBHDVK010000085.1 <> na Primary Assembly 976666 na HG00408#1#h1tg000073l unplaced-scaffold na na JBHDVK010000086.1 <> na Primary Assembly 127277 na HG00408#1#h1tg000077l unplaced-scaffold na na JBHDVK010000087.1 <> na Primary Assembly 64371 na HG00408#1#h1tg000079l unplaced-scaffold na na JBHDVK010000088.1 <> na Primary Assembly 258883 na HG00408#1#h1tg000082l unplaced-scaffold na na JBHDVK010000089.1 <> na Primary Assembly 68602 na HG00408#1#h1tg000083l unplaced-scaffold na na JBHDVK010000090.1 <> na Primary Assembly 220146 na HG00408#1#h1tg000084l unplaced-scaffold na na JBHDVK010000091.1 <> na Primary Assembly 54117 na HG00408#1#h1tg000087l unplaced-scaffold na na JBHDVK010000092.1 <> na Primary Assembly 63962 na HG00408#1#h1tg000088l unplaced-scaffold na na JBHDVK010000093.1 <> na Primary Assembly 109057 na HG00408#1#h1tg000089l unplaced-scaffold na na JBHDVK010000094.1 <> na Primary Assembly 359993 na HG00408#1#h1tg000090l unplaced-scaffold na na JBHDVK010000095.1 <> na Primary Assembly 77428 na HG00408#1#h1tg000092l unplaced-scaffold na na JBHDVK010000096.1 <> na Primary Assembly 112503 na HG00408#1#h1tg000095l unplaced-scaffold na na JBHDVK010000097.1 <> na Primary Assembly 146948 na HG00408#1#h1tg000096l unplaced-scaffold na na JBHDVK010000098.1 <> na Primary Assembly 191459 na HG00408#1#h1tg000100l unplaced-scaffold na na JBHDVK010000099.1 <> na Primary Assembly 122920 na HG00408#1#h1tg000101l unplaced-scaffold na na JBHDVK010000100.1 <> na Primary Assembly 107698 na HG00408#1#h1tg000113l unplaced-scaffold na na JBHDVK010000101.1 <> na Primary Assembly 125871 na HG00408#1#h1tg000115l unplaced-scaffold na na JBHDVK010000102.1 <> na Primary Assembly 119902 na HG00408#1#h1tg000121l unplaced-scaffold na na JBHDVK010000103.1 <> na Primary Assembly 52253 na HG00408#1#h1tg000122l unplaced-scaffold na na JBHDVK010000104.1 <> na Primary Assembly 97329 na HG00408#1#h1tg000124l unplaced-scaffold na na JBHDVK010000105.1 <> na Primary Assembly 55501 na HG00408#1#h1tg000125l unplaced-scaffold na na JBHDVK010000106.1 <> na Primary Assembly 114306 na HG00408#1#h1tg000127l unplaced-scaffold na na JBHDVK010000107.1 <> na Primary Assembly 65173 na HG00408#1#h1tg000132l unplaced-scaffold na na JBHDVK010000108.1 <> na Primary Assembly 64674 na HG00408#1#h1tg000135l unplaced-scaffold na na JBHDVK010000109.1 <> na Primary Assembly 62223 na HG00408#1#h1tg000140l unplaced-scaffold na na JBHDVK010000110.1 <> na Primary Assembly 51190 na HG00408#1#h1tg000173l unplaced-scaffold na na JBHDVK010000111.1 <> na Primary Assembly 52207 na HG00408#1#h1tg000174l unplaced-scaffold na na JBHDVK010000112.1 <> na Primary Assembly 55623 na