# Assembly name: aPelIbe1.pri # Organism name: Pelodytes ibericus (Iberian parsley frog) # Isolate: aPelIbe1 # Sex: male # Taxid: 233781 # BioSample: SAMN37110875 # BioProject: PRJNA1008780 # Submitter: Vertebrate Genomes Project # Date: 2024-01-26 # Assembly type: haploid # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JAYKOZ01 # Assembly method: deepconsensus v. 1.1; HiFiasm + Hi-C phasing v. 0.18.7-r519; purge_dups v. 1.2.5; yahs v. 1.2a.2; deepVariant polishing v. 1.4 # Expected final version: no # Genome coverage: 30.0x # Sequencing technology: PacBio Sequel II HiFi; Arima Hi-C v2 # RefSeq category: Representative Genome # GenBank assembly accession: GCA_036172795.1 # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_036172805.1 Primary Assembly ## GCA_036172825.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name SUPER_1 assembled-molecule 1 Chromosome CM069857.1 <> na Primary Assembly 302547531 na SUPER_2 assembled-molecule 2 Chromosome CM069858.1 <> na Primary Assembly 234961339 na SUPER_3 assembled-molecule 3 Chromosome CM069859.1 <> na Primary Assembly 230421236 na SUPER_4 assembled-molecule 4 Chromosome CM069860.1 <> na Primary Assembly 227791073 na SUPER_5 assembled-molecule 5 Chromosome CM069861.1 <> na Primary Assembly 222280400 na SUPER_6 assembled-molecule 6 Chromosome CM069862.1 <> na Primary Assembly 212059309 na SUPER_7 assembled-molecule 7 Chromosome CM069863.1 <> na Primary Assembly 198615977 na SUPER_8 assembled-molecule 8 Chromosome CM069864.1 <> na Primary Assembly 98371652 na SUPER_9 assembled-molecule 9 Chromosome CM069865.1 <> na Primary Assembly 85458450 na SUPER_10 assembled-molecule 10 Chromosome CM069866.1 <> na Primary Assembly 78285605 na SUPER_11 assembled-molecule 11 Chromosome CM069867.1 <> na Primary Assembly 78215218 na SUPER_12 assembled-molecule 12 Chromosome CM069868.1 <> na Primary Assembly 53389202 na scaffold_63 unplaced-scaffold na na JAYKOZ010000014.1 <> na Primary Assembly 551963 na scaffold_126 unplaced-scaffold na na JAYKOZ010000015.1 <> na Primary Assembly 24984 na scaffold_47 unplaced-scaffold na na JAYKOZ010000016.1 <> na Primary Assembly 992735 na scaffold_61 unplaced-scaffold na na JAYKOZ010000017.1 <> na Primary Assembly 573420 na scaffold_110 unplaced-scaffold na na JAYKOZ010000018.1 <> na Primary Assembly 64279 na scaffold_103 unplaced-scaffold na na JAYKOZ010000019.1 <> na Primary Assembly 102000 na scaffold_99 unplaced-scaffold na na JAYKOZ010000020.1 <> na Primary Assembly 130646 na scaffold_130 unplaced-scaffold na na JAYKOZ010000021.1 <> na Primary Assembly 17214 na scaffold_109 unplaced-scaffold na na JAYKOZ010000022.1 <> na Primary Assembly 80127 na scaffold_20 unplaced-scaffold na na JAYKOZ010000023.1 <> na Primary Assembly 3175811 na scaffold_44 unplaced-scaffold na na JAYKOZ010000024.1 <> na Primary Assembly 1219000 na scaffold_93 unplaced-scaffold na na JAYKOZ010000025.1 <> na Primary Assembly 165291 na scaffold_121 unplaced-scaffold na na JAYKOZ010000026.1 <> na Primary Assembly 30443 na scaffold_86 unplaced-scaffold na na JAYKOZ010000027.1 <> na Primary Assembly 209061 na scaffold_91 unplaced-scaffold na na JAYKOZ010000028.1 <> na Primary Assembly 178643 na scaffold_28 unplaced-scaffold na na JAYKOZ010000029.1 <> na Primary Assembly 2128033 na scaffold_124 unplaced-scaffold na na JAYKOZ010000030.1 <> na Primary Assembly 28454 na scaffold_85 unplaced-scaffold na na JAYKOZ010000031.1 <> na Primary Assembly 227563 na scaffold_35 unplaced-scaffold na na JAYKOZ010000032.1 <> na Primary Assembly 1532959 na scaffold_75 unplaced-scaffold na na JAYKOZ010000033.1 <> na Primary Assembly 402658 na scaffold_114 unplaced-scaffold na na JAYKOZ010000034.1 <> na Primary Assembly 47213 na scaffold_107 unplaced-scaffold na na JAYKOZ010000035.1 <> na Primary Assembly 83420 na scaffold_111 unplaced-scaffold na na JAYKOZ010000036.1 <> na Primary Assembly 62754 na scaffold_41 unplaced-scaffold na na JAYKOZ010000037.1 <> na Primary Assembly 1239196 na scaffold_131 unplaced-scaffold na na JAYKOZ010000038.1 <> na Primary Assembly 14843 na scaffold_92 unplaced-scaffold na na JAYKOZ010000039.1 <> na Primary Assembly 170092 na scaffold_102 unplaced-scaffold na na JAYKOZ010000040.1 <> na Primary Assembly 111051 na scaffold_120 unplaced-scaffold na na JAYKOZ010000041.1 <> na Primary Assembly 33574 na scaffold_26 unplaced-scaffold na na JAYKOZ010000042.1 <> na Primary Assembly 2396193 na scaffold_49 unplaced-scaffold na na JAYKOZ010000043.1 <> na Primary Assembly 907892 na scaffold_80 unplaced-scaffold na na JAYKOZ010000044.1 <> na Primary Assembly 325589 na scaffold_97 unplaced-scaffold na na JAYKOZ010000045.1 <> na Primary Assembly 133123 na scaffold_25 unplaced-scaffold na na JAYKOZ010000046.1 <> na Primary Assembly 2418950 na scaffold_105 unplaced-scaffold na na JAYKOZ010000047.1 <> na Primary Assembly 97266 na scaffold_108 unplaced-scaffold na na JAYKOZ010000048.1 <> na Primary Assembly 82529 na scaffold_62 unplaced-scaffold na na JAYKOZ010000049.1 <> na Primary Assembly 570000 na scaffold_64 unplaced-scaffold na na JAYKOZ010000050.1 <> na Primary Assembly 545103 na scaffold_53 unplaced-scaffold na na JAYKOZ010000051.1 <> na Primary Assembly 816793 na scaffold_88 unplaced-scaffold na na JAYKOZ010000052.1 <> na Primary Assembly 191533 na scaffold_116 unplaced-scaffold na na JAYKOZ010000053.1 <> na Primary Assembly 38104 na scaffold_19 unplaced-scaffold na na JAYKOZ010000054.1 <> na Primary Assembly 3219593 na scaffold_115 unplaced-scaffold na na JAYKOZ010000055.1 <> na Primary Assembly 42979 na scaffold_106 unplaced-scaffold na na JAYKOZ010000056.1 <> na Primary Assembly 96930 na scaffold_95 unplaced-scaffold na na JAYKOZ010000057.1 <> na Primary Assembly 154805 na scaffold_27 unplaced-scaffold na na JAYKOZ010000058.1 <> na Primary Assembly 2366709 na scaffold_83 unplaced-scaffold na na JAYKOZ010000059.1 <> na Primary Assembly 263506 na scaffold_58 unplaced-scaffold na na JAYKOZ010000060.1 <> na Primary Assembly 666005 na scaffold_112 unplaced-scaffold na na JAYKOZ010000061.1 <> na Primary Assembly 53498 na scaffold_129 unplaced-scaffold na na JAYKOZ010000062.1 <> na Primary Assembly 22062 na scaffold_81 unplaced-scaffold na na JAYKOZ010000063.1 <> na Primary Assembly 324936 na scaffold_96 unplaced-scaffold na na JAYKOZ010000064.1 <> na Primary Assembly 145835 na scaffold_132 unplaced-scaffold na na JAYKOZ010000065.1 <> na Primary Assembly 14010 na scaffold_123 unplaced-scaffold na na JAYKOZ010000066.1 <> na Primary Assembly 28564 na scaffold_101 unplaced-scaffold na na JAYKOZ010000067.1 <> na Primary Assembly 112851 na scaffold_22 unplaced-scaffold na na JAYKOZ010000068.1 <> na Primary Assembly 2814637 na scaffold_117 unplaced-scaffold na na JAYKOZ010000069.1 <> na Primary Assembly 38074 na scaffold_24 unplaced-scaffold na na JAYKOZ010000070.1 <> na Primary Assembly 2618069 na scaffold_65 unplaced-scaffold na na JAYKOZ010000071.1 <> na Primary Assembly 534005 na scaffold_37 unplaced-scaffold na na JAYKOZ010000072.1 <> na Primary Assembly 1495068 na scaffold_77 unplaced-scaffold na na JAYKOZ010000073.1 <> na Primary Assembly 359697 na scaffold_66 unplaced-scaffold na na JAYKOZ010000074.1 <> na Primary Assembly 530046 na scaffold_104 unplaced-scaffold na na JAYKOZ010000075.1 <> na Primary Assembly 101599 na scaffold_87 unplaced-scaffold na na JAYKOZ010000076.1 <> na Primary Assembly 202135 na scaffold_56 unplaced-scaffold na na JAYKOZ010000077.1 <> na Primary Assembly 800002 na scaffold_98 unplaced-scaffold na na JAYKOZ010000078.1 <> na Primary Assembly 130852 na scaffold_127 unplaced-scaffold na na JAYKOZ010000079.1 <> na Primary Assembly 24360 na scaffold_90 unplaced-scaffold na na JAYKOZ010000080.1 <> na Primary Assembly 184000 na scaffold_39 unplaced-scaffold na na JAYKOZ010000081.1 <> na Primary Assembly 1415057 na scaffold_23 unplaced-scaffold na na JAYKOZ010000082.1 <> na Primary Assembly 2687811 na scaffold_79 unplaced-scaffold na na JAYKOZ010000083.1 <> na Primary Assembly 326917 na scaffold_46 unplaced-scaffold na na JAYKOZ010000084.1 <> na Primary Assembly 1051739 na scaffold_133 unplaced-scaffold na na JAYKOZ010000085.1 <> na Primary Assembly 8000 na scaffold_73 unplaced-scaffold na na JAYKOZ010000086.1 <> na Primary Assembly 452590 na scaffold_33 unplaced-scaffold na na JAYKOZ010000087.1 <> na Primary Assembly 1653780 na scaffold_122 unplaced-scaffold na na JAYKOZ010000088.1 <> na Primary Assembly 29567 na scaffold_100 unplaced-scaffold na na JAYKOZ010000089.1 <> na Primary Assembly 116315 na scaffold_68 unplaced-scaffold na na JAYKOZ010000090.1 <> na Primary Assembly 503445 na scaffold_113 unplaced-scaffold na na JAYKOZ010000091.1 <> na Primary Assembly 51639 na scaffold_84 unplaced-scaffold na na JAYKOZ010000092.1 <> na Primary Assembly 228698 na scaffold_17 unplaced-scaffold na na JAYKOZ010000093.1 <> na Primary Assembly 5314870 na scaffold_119 unplaced-scaffold na na JAYKOZ010000094.1 <> na Primary Assembly 34661 na scaffold_71 unplaced-scaffold na na JAYKOZ010000095.1 <> na Primary Assembly 464645 na scaffold_82 unplaced-scaffold na na JAYKOZ010000096.1 <> na Primary Assembly 313137 na scaffold_128 unplaced-scaffold na na JAYKOZ010000097.1 <> na Primary Assembly 23392 na scaffold_125 unplaced-scaffold na na JAYKOZ010000098.1 <> na Primary Assembly 27065 na scaffold_45 unplaced-scaffold na na JAYKOZ010000099.1 <> na Primary Assembly 1075995 na atg000001l_rc_rotated assembled-molecule MT Mitochondrion CM069894.1 <> na non-nuclear 18155 na