# Assembly name: rSteOdo2_p1.1 # Organism name: Sternotherus odoratus (turtles) # Isolate: MuskTurtle02 # Sex: male # Taxid: 142480 # BioSample: SAMN36942441 # BioProject: PRJNA1016400 # Submitter: Canada's Genomic Enterprise # Date: 2026-05-05 # Assembly type: haploid (principal pseudohaplotype of diploid) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JAVMKO02 # Assembly method: hifiasm v. 0.19.4; purge_dups v. 1.2.5; yahs v. 1.2 # Expected final version: No # Genome coverage: 20.26x # Sequencing technology: PacBio Sequel II; Illumina NovaSeq 6000 # RefSeq category: Reference Genome # GenBank assembly accession: GCA_032164245.2 # Linked assembly: GCA_032164215.2 (alternate pseudohaplotype of diploid) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_032164255.2 Primary Assembly ## GCA_032164265.2 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name SUPER_1 assembled-molecule 1 Chromosome CM170073.1 <> na Primary Assembly 305335045 na SUPER_2 assembled-molecule 2 Chromosome CM170074.1 <> na Primary Assembly 224231585 na SUPER_3 assembled-molecule 3 Chromosome CM170075.1 <> na Primary Assembly 168571173 na SUPER_4 assembled-molecule 4 Chromosome CM170076.1 <> na Primary Assembly 109764104 na SUPER_5 assembled-molecule 5 Chromosome CM170077.1 <> na Primary Assembly 107607656 na SUPER_6 assembled-molecule 6 Chromosome CM170078.1 <> na Primary Assembly 105594630 na SUPER_7 assembled-molecule 7 Chromosome CM170079.1 <> na Primary Assembly 105334463 na SUPER_8 assembled-molecule 8 Chromosome CM170080.1 <> na Primary Assembly 89805571 na SUPER_9 assembled-molecule 9 Chromosome CM170081.1 <> na Primary Assembly 84632137 na SUPER_10 assembled-molecule 10 Chromosome CM170082.1 <> na Primary Assembly 69909871 na SUPER_11 assembled-molecule 11 Chromosome CM170083.1 <> na Primary Assembly 62779567 na SUPER_12 assembled-molecule 12 Chromosome CM170084.1 <> na Primary Assembly 35478838 na SUPER_13 assembled-molecule 13 Chromosome CM170085.1 <> na Primary Assembly 33396877 na SUPER_14 assembled-molecule 14 Chromosome CM170086.1 <> na Primary Assembly 29154399 na SUPER_15 assembled-molecule 15 Chromosome CM170087.1 <> na Primary Assembly 25549033 na SUPER_16 assembled-molecule 16 Chromosome CM170088.1 <> na Primary Assembly 20525374 na SUPER_17 assembled-molecule 17 Chromosome CM170089.1 <> na Primary Assembly 18724739 na SUPER_18 assembled-molecule 18 Chromosome CM170090.1 <> na Primary Assembly 17844644 na SUPER_19 assembled-molecule 19 Chromosome CM170091.1 <> na Primary Assembly 16014958 na SUPER_20 assembled-molecule 20 Chromosome CM170092.1 <> na Primary Assembly 14908486 na SUPER_21 assembled-molecule 21 Chromosome CM170093.1 <> na Primary Assembly 14577586 na SUPER_22 assembled-molecule 22 Chromosome CM170094.1 <> na Primary Assembly 13796307 na SUPER_23 assembled-molecule 23 Chromosome CM170095.1 <> na Primary Assembly 13743040 na SUPER_24 assembled-molecule 24 Chromosome CM170096.1 <> na Primary Assembly 13546654 na SUPER_25 assembled-molecule 25 Chromosome CM170097.1 <> na Primary Assembly 12464716 na SUPER_26 assembled-molecule 26 Chromosome CM170098.1 <> na Primary Assembly 9974239 na SUPER_27 assembled-molecule 27 Chromosome CM170099.1 <> na Primary Assembly 7617265 na SUPER_28 assembled-molecule 28 Chromosome CM170100.1 <> na Primary Assembly 6742528 na SUPER_1_unloc_1: unlocalized-scaffold 1 Chromosome JAVMKO020000068.1 <> na Primary Assembly 32155 na SUPER_2_unloc_1: unlocalized-scaffold 2 Chromosome JAVMKO020000037.1 <> na Primary Assembly 159803 na SUPER_3_unloc_1: unlocalized-scaffold 3 Chromosome JAVMKO020000057.1 <> na Primary Assembly 42972 na SUPER_4_unloc_1: unlocalized-scaffold 4 Chromosome JAVMKO020000030.1 <> na Primary Assembly 585943 na SUPER_5_unloc_1: unlocalized-scaffold 5 Chromosome JAVMKO020000032.1 <> na Primary Assembly 266338 na SUPER_6_unloc_2: unlocalized-scaffold 6 Chromosome JAVMKO020000039.1 <> na Primary Assembly 106535 na SUPER_6_unloc_1: unlocalized-scaffold 6 Chromosome JAVMKO020000047.1 <> na Primary Assembly 59515 na SUPER_8_unloc_1: unlocalized-scaffold 8 Chromosome JAVMKO020000036.1 <> na Primary Assembly 159803 na SUPER_10_unloc_1: unlocalized-scaffold 10 Chromosome JAVMKO020000038.1 <> na Primary Assembly 106535 na SUPER_10_unloc_2: unlocalized-scaffold 10 Chromosome JAVMKO020000042.1 <> na Primary Assembly 83324 na SUPER_14_unloc_1: unlocalized-scaffold 14 Chromosome JAVMKO020000034.1 <> na Primary Assembly 213070 na SUPER_25_unloc_2: unlocalized-scaffold 25 Chromosome JAVMKO020000029.1 <> na Primary Assembly 3622196 na SUPER_25_unloc_3: unlocalized-scaffold 25 Chromosome JAVMKO020000031.1 <> na Primary Assembly 574604 na SUPER_25_unloc_4: unlocalized-scaffold 25 Chromosome JAVMKO020000033.1 <> na Primary Assembly 260351 na SUPER_25_unloc_1: unlocalized-scaffold 25 Chromosome JAVMKO020000035.1 <> na Primary Assembly 159803 na SUPER_26_unloc_1: unlocalized-scaffold 26 Chromosome JAVMKO020000040.1 <> na Primary Assembly 106535 na SUPER_26_unloc_2: unlocalized-scaffold 26 Chromosome JAVMKO020000050.1 <> na Primary Assembly 53267 na Scaffold_29 unplaced-scaffold na na JAVMKO020000041.1 <> na Primary Assembly 91359 na Scaffold_30 unplaced-scaffold na na JAVMKO020000043.1 <> na Primary Assembly 76932 na Scaffold_31 unplaced-scaffold na na JAVMKO020000044.1 <> na Primary Assembly 65251 na Scaffold_32 unplaced-scaffold na na JAVMKO020000045.1 <> na Primary Assembly 64275 na Scaffold_33 unplaced-scaffold na na JAVMKO020000046.1 <> na Primary Assembly 62671 na Scaffold_34 unplaced-scaffold na na JAVMKO020000048.1 <> na Primary Assembly 56207 na Scaffold_35 unplaced-scaffold na na JAVMKO020000049.1 <> na Primary Assembly 55347 na Scaffold_36 unplaced-scaffold na na JAVMKO020000051.1 <> na Primary Assembly 53267 na Scaffold_37 unplaced-scaffold na na JAVMKO020000052.1 <> na Primary Assembly 51123 na Scaffold_38 unplaced-scaffold na na JAVMKO020000053.1 <> na Primary Assembly 50675 na Scaffold_39 unplaced-scaffold na na JAVMKO020000054.1 <> na Primary Assembly 50426 na Scaffold_40 unplaced-scaffold na na JAVMKO020000055.1 <> na Primary Assembly 48303 na Scaffold_41 unplaced-scaffold na na JAVMKO020000056.1 <> na Primary Assembly 43317 na Scaffold_42 unplaced-scaffold na na JAVMKO020000058.1 <> na Primary Assembly 42274 na Scaffold_43 unplaced-scaffold na na JAVMKO020000059.1 <> na Primary Assembly 39308 na Scaffold_44 unplaced-scaffold na na JAVMKO020000060.1 <> na Primary Assembly 37948 na Scaffold_45 unplaced-scaffold na na JAVMKO020000061.1 <> na Primary Assembly 37707 na Scaffold_46 unplaced-scaffold na na JAVMKO020000062.1 <> na Primary Assembly 37645 na Scaffold_47 unplaced-scaffold na na JAVMKO020000063.1 <> na Primary Assembly 36951 na Scaffold_48 unplaced-scaffold na na JAVMKO020000064.1 <> na Primary Assembly 35438 na Scaffold_49 unplaced-scaffold na na JAVMKO020000065.1 <> na Primary Assembly 34650 na Scaffold_50 unplaced-scaffold na na JAVMKO020000066.1 <> na Primary Assembly 34396 na Scaffold_51 unplaced-scaffold na na JAVMKO020000067.1 <> na Primary Assembly 33579 na Scaffold_52 unplaced-scaffold na na JAVMKO020000069.1 <> na Primary Assembly 30036 na Scaffold_53 unplaced-scaffold na na JAVMKO020000070.1 <> na Primary Assembly 27649 na Scaffold_54 unplaced-scaffold na na JAVMKO020000071.1 <> na Primary Assembly 23256 na Scaffold_55 unplaced-scaffold na na JAVMKO020000072.1 <> na Primary Assembly 20515 na Scaffold_56 unplaced-scaffold na na JAVMKO020000073.1 <> na Primary Assembly 17180 na ptg000001c_rc_rotated assembled-molecule MT Mitochondrion CM063265.1 <> na non-nuclear 17404 na