# Assembly name: mHipLar1.pri # Organism name: Hipposideros larvatus (bats) # Isolate: mHipLar1 # Sex: female # Taxid: 175524 # BioSample: SAMN36277597 # BioProject: PRJNA1006758 # Submitter: Vertebrate Genomes Project # Date: 2023-09-25 # Assembly type: haploid (principal pseudohaplotype of diploid) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JAVKSA01 # Assembly method: HiFiasm v. 0.12-r304; purge_dups v. 1.2.5; Bionano Solve v. 3.6.1_11162020; salsa v. 2.2 # Expected final version: no # Genome coverage: 30.47x # Sequencing technology: PacBio Sequel II HiFi; Bionano DLS; Arima Hi-C v2 # RefSeq category: Representative Genome # GenBank assembly accession: GCA_031876335.1 # Linked assembly: GCA_031878685.1 (alternate pseudohaplotype of diploid) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_031876365.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name SUPER_1 assembled-molecule 1 Chromosome CM063088.1 <> na Primary Assembly 231003163 na SUPER_2 assembled-molecule 2 Chromosome CM063089.1 <> na Primary Assembly 230781231 na SUPER_3 assembled-molecule 3 Chromosome CM063090.1 <> na Primary Assembly 220058359 na SUPER_4 assembled-molecule 4 Chromosome CM063091.1 <> na Primary Assembly 200444180 na SUPER_5 assembled-molecule 5 Chromosome CM063092.1 <> na Primary Assembly 186857926 na SUPER_6 assembled-molecule 6 Chromosome CM063093.1 <> na Primary Assembly 185549907 na SUPER_7 assembled-molecule 7 Chromosome CM063094.1 <> na Primary Assembly 145751350 na SUPER_8 assembled-molecule 8 Chromosome CM063095.1 <> na Primary Assembly 119375016 na SUPER_9 assembled-molecule 9 Chromosome CM063096.1 <> na Primary Assembly 111271440 na SUPER_10 assembled-molecule 10 Chromosome CM063097.1 <> na Primary Assembly 104955349 na SUPER_11 assembled-molecule 11 Chromosome CM063098.1 <> na Primary Assembly 79640017 na SUPER_12 assembled-molecule 12 Chromosome CM063099.1 <> na Primary Assembly 79353719 na SUPER_13 assembled-molecule 13 Chromosome CM063100.1 <> na Primary Assembly 70677420 na SUPER_14 assembled-molecule 14 Chromosome CM063101.1 <> na Primary Assembly 65803158 na SUPER_15 assembled-molecule 15 Chromosome CM063102.1 <> na Primary Assembly 61265756 na SUPER_16 assembled-molecule 16 Chromosome CM063103.1 <> na Primary Assembly 40908200 na SUPER_17 assembled-molecule 17 Chromosome CM063104.1 <> na Primary Assembly 25988649 na SUPER_X assembled-molecule X Chromosome CM063105.1 <> na Primary Assembly 149649597 na scaffold_100 unplaced-scaffold na na JAVKSA010000028.1 <> na Primary Assembly 85700 na scaffold_101 unplaced-scaffold na na JAVKSA010000054.1 <> na Primary Assembly 84087 na scaffold_102 unplaced-scaffold na na JAVKSA010000058.1 <> na Primary Assembly 81436 na scaffold_104 unplaced-scaffold na na JAVKSA010000051.1 <> na Primary Assembly 72357 na scaffold_106 unplaced-scaffold na na JAVKSA010000023.1 <> na Primary Assembly 66001 na scaffold_108 unplaced-scaffold na na JAVKSA010000042.1 <> na Primary Assembly 61804 na scaffold_109 unplaced-scaffold na na JAVKSA010000059.1 <> na Primary Assembly 60583 na scaffold_113 unplaced-scaffold na na JAVKSA010000035.1 <> na Primary Assembly 55567 na scaffold_115 unplaced-scaffold na na JAVKSA010000067.1 <> na Primary Assembly 53577 na scaffold_116 unplaced-scaffold na na JAVKSA010000029.1 <> na Primary Assembly 53294 na scaffold_117 unplaced-scaffold na na JAVKSA010000052.1 <> na Primary Assembly 52913 na scaffold_119 unplaced-scaffold na na JAVKSA010000064.1 <> na Primary Assembly 51466 na scaffold_120 unplaced-scaffold na na JAVKSA010000050.1 <> na Primary Assembly 51057 na scaffold_124 unplaced-scaffold na na JAVKSA010000027.1 <> na Primary Assembly 45087 na scaffold_125 unplaced-scaffold na na JAVKSA010000044.1 <> na Primary Assembly 44854 na scaffold_133 unplaced-scaffold na na JAVKSA010000057.1 <> na Primary Assembly 39239 na scaffold_160 unplaced-scaffold na na JAVKSA010000043.1 <> na Primary Assembly 34408 na scaffold_171 unplaced-scaffold na na JAVKSA010000047.1 <> na Primary Assembly 33216 na scaffold_191 unplaced-scaffold na na JAVKSA010000048.1 <> na Primary Assembly 31632 na scaffold_219 unplaced-scaffold na na JAVKSA010000046.1 <> na Primary Assembly 29548 na scaffold_231 unplaced-scaffold na na JAVKSA010000039.1 <> na Primary Assembly 28805 na scaffold_244 unplaced-scaffold na na JAVKSA010000031.1 <> na Primary Assembly 28027 na scaffold_273 unplaced-scaffold na na JAVKSA010000030.1 <> na Primary Assembly 26385 na scaffold_332 unplaced-scaffold na na JAVKSA010000069.1 <> na Primary Assembly 23895 na scaffold_362 unplaced-scaffold na na JAVKSA010000024.1 <> na Primary Assembly 21791 na scaffold_395 unplaced-scaffold na na JAVKSA010000037.1 <> na Primary Assembly 19870 na scaffold_40 unplaced-scaffold na na JAVKSA010000049.1 <> na Primary Assembly 5957832 na scaffold_405 unplaced-scaffold na na JAVKSA010000022.1 <> na Primary Assembly 19387 na scaffold_453 unplaced-scaffold na na JAVKSA010000021.1 <> na Primary Assembly 17803 na scaffold_46 unplaced-scaffold na na JAVKSA010000065.1 <> na Primary Assembly 3964389 na scaffold_473 unplaced-scaffold na na JAVKSA010000045.1 <> na Primary Assembly 17334 na scaffold_54 unplaced-scaffold na na JAVKSA010000060.1 <> na Primary Assembly 3066965 na scaffold_55 unplaced-scaffold na na JAVKSA010000061.1 <> na Primary Assembly 2971473 na scaffold_60 unplaced-scaffold na na JAVKSA010000025.1 <> na Primary Assembly 2542091 na scaffold_613 unplaced-scaffold na na JAVKSA010000026.1 <> na Primary Assembly 1619 na scaffold_62 unplaced-scaffold na na JAVKSA010000055.1 <> na Primary Assembly 1945532 na scaffold_63 unplaced-scaffold na na JAVKSA010000053.1 <> na Primary Assembly 1925431 na scaffold_67 unplaced-scaffold na na JAVKSA010000019.1 <> na Primary Assembly 1611770 na scaffold_71 unplaced-scaffold na na JAVKSA010000068.1 <> na Primary Assembly 1190774 na scaffold_74 unplaced-scaffold na na JAVKSA010000032.1 <> na Primary Assembly 619309 na scaffold_75 unplaced-scaffold na na JAVKSA010000038.1 <> na Primary Assembly 580741 na scaffold_78 unplaced-scaffold na na JAVKSA010000063.1 <> na Primary Assembly 423681 na scaffold_81 unplaced-scaffold na na JAVKSA010000033.1 <> na Primary Assembly 394170 na scaffold_86 unplaced-scaffold na na JAVKSA010000020.1 <> na Primary Assembly 258577 na scaffold_92 unplaced-scaffold na na JAVKSA010000041.1 <> na Primary Assembly 141865 na scaffold_93 unplaced-scaffold na na JAVKSA010000040.1 <> na Primary Assembly 138135 na scaffold_94 unplaced-scaffold na na JAVKSA010000036.1 <> na Primary Assembly 131716 na scaffold_95 unplaced-scaffold na na JAVKSA010000034.1 <> na Primary Assembly 113115 na scaffold_96 unplaced-scaffold na na JAVKSA010000056.1 <> na Primary Assembly 112118 na scaffold_97 unplaced-scaffold na na JAVKSA010000062.1 <> na Primary Assembly 108444 na scaffold_99 unplaced-scaffold na na JAVKSA010000066.1 <> na Primary Assembly 98417 na