# Assembly name: DD_mTadBra1_pri # Organism name: Tadarida brasiliensis (Brazilian free-tailed bat) # Isolate: mTadBra1 # Sex: male # Taxid: 9438 # BioSample: SAMN35075070 # BioProject: PRJNA972445 # Submitter: Bat1K # Date: 2023-08-22 # Assembly type: haploid (principal pseudohaplotype of diploid) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JAUMIU01 # Assembly method: Hifiasm v. 0.16.0; purge_dups v. 1.2.5; scaff10X v. git commit bc3a0cb; Bionano Solve v. 3.6.1; salsa2 v. git commit e6e3c77 # Expected final version: yes # Genome coverage: 40x # Sequencing technology: PacBio Sequel 2; Illumina NovaSeq # RefSeq category: Representative Genome # GenBank assembly accession: GCA_030848825.1 # Linked assembly: GCA_030848815.1 (alternate pseudohaplotype of diploid) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_030848835.1 Primary Assembly ## GCA_030848845.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name manual_scaffold_1 assembled-molecule 1 Chromosome CM061257.1 <> na Primary Assembly 250357659 na manual_scaffold_7 assembled-molecule 2 Chromosome CM061258.1 <> na Primary Assembly 131366638 na manual_scaffold_2 assembled-molecule 3 Chromosome CM061259.1 <> na Primary Assembly 123954994 na manual_scaffold_3 assembled-molecule 4 Chromosome CM061260.1 <> na Primary Assembly 112652436 na manual_scaffold_4 assembled-molecule 5 Chromosome CM061261.1 <> na Primary Assembly 112580834 na manual_scaffold_5 assembled-molecule 6 Chromosome CM061262.1 <> na Primary Assembly 111418324 na manual_scaffold_14 assembled-molecule 7 Chromosome CM061263.1 <> na Primary Assembly 111368843 na manual_scaffold_6 assembled-molecule 8 Chromosome CM061264.1 <> na Primary Assembly 111098925 na manual_scaffold_8 assembled-molecule 9 Chromosome CM061265.1 <> na Primary Assembly 107746758 na manual_scaffold_9 assembled-molecule 10 Chromosome CM061266.1 <> na Primary Assembly 105253767 na manual_scaffold_10 assembled-molecule 11 Chromosome CM061267.1 <> na Primary Assembly 101937717 na manual_scaffold_13 assembled-molecule 12 Chromosome CM061268.1 <> na Primary Assembly 93068937 na manual_scaffold_11 assembled-molecule 13 Chromosome CM061269.1 <> na Primary Assembly 90219467 na manual_scaffold_15 assembled-molecule 14 Chromosome CM061270.1 <> na Primary Assembly 78395959 na manual_scaffold_16 assembled-molecule 15 Chromosome CM061271.1 <> na Primary Assembly 70705328 na manual_scaffold_17 assembled-molecule 16 Chromosome CM061272.1 <> na Primary Assembly 70395922 na manual_scaffold_18 assembled-molecule 17 Chromosome CM061273.1 <> na Primary Assembly 66982268 na manual_scaffold_19 assembled-molecule 18 Chromosome CM061274.1 <> na Primary Assembly 66967517 na manual_scaffold_20 assembled-molecule 19 Chromosome CM061275.1 <> na Primary Assembly 53271390 na manual_scaffold_21 assembled-molecule 20 Chromosome CM061276.1 <> na Primary Assembly 52736693 na manual_scaffold_22 assembled-molecule 21 Chromosome CM061277.1 <> na Primary Assembly 38494270 na manual_scaffold_23 assembled-molecule 22 Chromosome CM061278.1 <> na Primary Assembly 27110749 na manual_scaffold_24 assembled-molecule 23 Chromosome CM061279.1 <> na Primary Assembly 15501133 na manual_scaffold_12 assembled-molecule X Chromosome CM061280.1 <> na Primary Assembly 134431381 na manual_scaffold_25 assembled-molecule Y Chromosome CM061281.1 <> na Primary Assembly 9583748 na manual_scaffold_26 unplaced-scaffold na na JAUMIU010000026.1 <> na Primary Assembly 4940231 na manual_scaffold_27 unplaced-scaffold na na JAUMIU010000027.1 <> na Primary Assembly 2896574 na manual_scaffold_28 unplaced-scaffold na na JAUMIU010000028.1 <> na Primary Assembly 2530528 na manual_scaffold_29 unplaced-scaffold na na JAUMIU010000029.1 <> na Primary Assembly 2237263 na manual_scaffold_30 unplaced-scaffold na na JAUMIU010000030.1 <> na Primary Assembly 1717748 na manual_scaffold_31 unplaced-scaffold na na JAUMIU010000031.1 <> na Primary Assembly 1635555 na manual_scaffold_32 unplaced-scaffold na na JAUMIU010000032.1 <> na Primary Assembly 1562933 na manual_scaffold_33 unplaced-scaffold na na JAUMIU010000033.1 <> na Primary Assembly 1263160 na manual_scaffold_34 unplaced-scaffold na na JAUMIU010000034.1 <> na Primary Assembly 1109084 na manual_scaffold_35 unplaced-scaffold na na JAUMIU010000035.1 <> na Primary Assembly 1009732 na manual_scaffold_36 unplaced-scaffold na na JAUMIU010000036.1 <> na Primary Assembly 916050 na manual_scaffold_37 unplaced-scaffold na na JAUMIU010000037.1 <> na Primary Assembly 911073 na manual_scaffold_38 unplaced-scaffold na na JAUMIU010000038.1 <> na Primary Assembly 707796 na manual_scaffold_39 unplaced-scaffold na na JAUMIU010000039.1 <> na Primary Assembly 643036 na manual_scaffold_40 unplaced-scaffold na na JAUMIU010000040.1 <> na Primary Assembly 563103 na manual_scaffold_41 unplaced-scaffold na na JAUMIU010000041.1 <> na Primary Assembly 536083 na manual_scaffold_42 unplaced-scaffold na na JAUMIU010000042.1 <> na Primary Assembly 532129 na manual_scaffold_43 unplaced-scaffold na na JAUMIU010000043.1 <> na Primary Assembly 513071 na manual_scaffold_44 unplaced-scaffold na na JAUMIU010000044.1 <> na Primary Assembly 480367 na manual_scaffold_45 unplaced-scaffold na na JAUMIU010000045.1 <> na Primary Assembly 430529 na manual_scaffold_46 unplaced-scaffold na na JAUMIU010000046.1 <> na Primary Assembly 419970 na manual_scaffold_47 unplaced-scaffold na na JAUMIU010000047.1 <> na Primary Assembly 398591 na manual_scaffold_48 unplaced-scaffold na na JAUMIU010000048.1 <> na Primary Assembly 304224 na manual_scaffold_49 unplaced-scaffold na na JAUMIU010000049.1 <> na Primary Assembly 296684 na manual_scaffold_50 unplaced-scaffold na na JAUMIU010000050.1 <> na Primary Assembly 284147 na manual_scaffold_51 unplaced-scaffold na na JAUMIU010000051.1 <> na Primary Assembly 272168 na manual_scaffold_52 unplaced-scaffold na na JAUMIU010000052.1 <> na Primary Assembly 257110 na manual_scaffold_53 unplaced-scaffold na na JAUMIU010000053.1 <> na Primary Assembly 241545 na manual_scaffold_54 unplaced-scaffold na na JAUMIU010000054.1 <> na Primary Assembly 230805 na manual_scaffold_55 unplaced-scaffold na na JAUMIU010000055.1 <> na Primary Assembly 225703 na manual_scaffold_56 unplaced-scaffold na na JAUMIU010000056.1 <> na Primary Assembly 219383 na manual_scaffold_57 unplaced-scaffold na na JAUMIU010000057.1 <> na Primary Assembly 205690 na manual_scaffold_58 unplaced-scaffold na na JAUMIU010000058.1 <> na Primary Assembly 205592 na manual_scaffold_59 unplaced-scaffold na na JAUMIU010000059.1 <> na Primary Assembly 186350 na manual_scaffold_60 unplaced-scaffold na na JAUMIU010000060.1 <> na Primary Assembly 167898 na manual_scaffold_61 unplaced-scaffold na na JAUMIU010000061.1 <> na Primary Assembly 153755 na manual_scaffold_62 unplaced-scaffold na na JAUMIU010000062.1 <> na Primary Assembly 147693 na manual_scaffold_63 unplaced-scaffold na na JAUMIU010000063.1 <> na Primary Assembly 143149 na manual_scaffold_64 unplaced-scaffold na na JAUMIU010000064.1 <> na Primary Assembly 139347 na manual_scaffold_65 unplaced-scaffold na na JAUMIU010000065.1 <> na Primary Assembly 136168 na manual_scaffold_66 unplaced-scaffold na na JAUMIU010000066.1 <> na Primary Assembly 132922 na manual_scaffold_67 unplaced-scaffold na na JAUMIU010000067.1 <> na Primary Assembly 128209 na manual_scaffold_68 unplaced-scaffold na na JAUMIU010000068.1 <> na Primary Assembly 128092 na manual_scaffold_69 unplaced-scaffold na na JAUMIU010000069.1 <> na Primary Assembly 121778 na manual_scaffold_70 unplaced-scaffold na na JAUMIU010000070.1 <> na Primary Assembly 111388 na manual_scaffold_71 unplaced-scaffold na na JAUMIU010000071.1 <> na Primary Assembly 111019 na manual_scaffold_72 unplaced-scaffold na na JAUMIU010000072.1 <> na Primary Assembly 110622 na manual_scaffold_73 unplaced-scaffold na na JAUMIU010000073.1 <> na Primary Assembly 109403 na manual_scaffold_74 unplaced-scaffold na na JAUMIU010000074.1 <> na Primary Assembly 106937 na manual_scaffold_75 unplaced-scaffold na na JAUMIU010000075.1 <> na Primary Assembly 100932 na manual_scaffold_76 unplaced-scaffold na na JAUMIU010000076.1 <> na Primary Assembly 94888 na manual_scaffold_77 unplaced-scaffold na na JAUMIU010000077.1 <> na Primary Assembly 94498 na manual_scaffold_78 unplaced-scaffold na na JAUMIU010000078.1 <> na Primary Assembly 92113 na manual_scaffold_79 unplaced-scaffold na na JAUMIU010000079.1 <> na Primary Assembly 89283 na manual_scaffold_80 unplaced-scaffold na na JAUMIU010000080.1 <> na Primary Assembly 88339 na manual_scaffold_81 unplaced-scaffold na na JAUMIU010000081.1 <> na Primary Assembly 85363 na manual_scaffold_82 unplaced-scaffold na na JAUMIU010000082.1 <> na Primary Assembly 75640 na manual_scaffold_83 unplaced-scaffold na na JAUMIU010000083.1 <> na Primary Assembly 59586 na manual_scaffold_84 unplaced-scaffold na na JAUMIU010000084.1 <> na Primary Assembly 55447 na manual_scaffold_85 unplaced-scaffold na na JAUMIU010000085.1 <> na Primary Assembly 51993 na manual_scaffold_86 unplaced-scaffold na na JAUMIU010000086.1 <> na Primary Assembly 51783 na manual_scaffold_87 unplaced-scaffold na na JAUMIU010000087.1 <> na Primary Assembly 47162 na manual_scaffold_88 unplaced-scaffold na na JAUMIU010000088.1 <> na Primary Assembly 47014 na manual_scaffold_89 unplaced-scaffold na na JAUMIU010000089.1 <> na Primary Assembly 45293 na manual_scaffold_90 unplaced-scaffold na na JAUMIU010000090.1 <> na Primary Assembly 45200 na manual_scaffold_91 unplaced-scaffold na na JAUMIU010000091.1 <> na Primary Assembly 44182 na manual_scaffold_92 unplaced-scaffold na na JAUMIU010000092.1 <> na Primary Assembly 43148 na manual_scaffold_93 unplaced-scaffold na na JAUMIU010000093.1 <> na Primary Assembly 42725 na manual_scaffold_94 unplaced-scaffold na na JAUMIU010000094.1 <> na Primary Assembly 40680 na manual_scaffold_95 unplaced-scaffold na na JAUMIU010000095.1 <> na Primary Assembly 40306 na manual_scaffold_96 unplaced-scaffold na na JAUMIU010000096.1 <> na Primary Assembly 38254 na manual_scaffold_97 unplaced-scaffold na na JAUMIU010000097.1 <> na Primary Assembly 37794 na manual_scaffold_98 unplaced-scaffold na na JAUMIU010000098.1 <> na Primary Assembly 37444 na manual_scaffold_99 unplaced-scaffold na na JAUMIU010000099.1 <> na Primary Assembly 37139 na manual_scaffold_100 unplaced-scaffold na na JAUMIU010000100.1 <> na Primary Assembly 36269 na manual_scaffold_101 unplaced-scaffold na na JAUMIU010000101.1 <> na Primary Assembly 34101 na manual_scaffold_102 unplaced-scaffold na na JAUMIU010000102.1 <> na Primary Assembly 33206 na manual_scaffold_103 unplaced-scaffold na na JAUMIU010000103.1 <> na Primary Assembly 33196 na manual_scaffold_104 unplaced-scaffold na na JAUMIU010000104.1 <> na Primary Assembly 33127 na manual_scaffold_105 unplaced-scaffold na na JAUMIU010000105.1 <> na Primary Assembly 33026 na manual_scaffold_106 unplaced-scaffold na na JAUMIU010000106.1 <> na Primary Assembly 32772 na manual_scaffold_107 unplaced-scaffold na na JAUMIU010000107.1 <> na Primary Assembly 32495 na manual_scaffold_108 unplaced-scaffold na na JAUMIU010000108.1 <> na Primary Assembly 32393 na manual_scaffold_109 unplaced-scaffold na na JAUMIU010000109.1 <> na Primary Assembly 32178 na manual_scaffold_110 unplaced-scaffold na na JAUMIU010000110.1 <> na Primary Assembly 32132 na manual_scaffold_111 unplaced-scaffold na na JAUMIU010000111.1 <> na Primary Assembly 30401 na manual_scaffold_112 unplaced-scaffold na na JAUMIU010000112.1 <> na Primary Assembly 30371 na manual_scaffold_113 unplaced-scaffold na na JAUMIU010000113.1 <> na Primary Assembly 30311 na manual_scaffold_114 unplaced-scaffold na na JAUMIU010000114.1 <> na Primary Assembly 30276 na manual_scaffold_115 unplaced-scaffold na na JAUMIU010000115.1 <> na Primary Assembly 30150 na manual_scaffold_116 unplaced-scaffold na na JAUMIU010000116.1 <> na Primary Assembly 30118 na manual_scaffold_117 unplaced-scaffold na na JAUMIU010000117.1 <> na Primary Assembly 29391 na manual_scaffold_118 unplaced-scaffold na na JAUMIU010000118.1 <> na Primary Assembly 29242 na manual_scaffold_119 unplaced-scaffold na na JAUMIU010000119.1 <> na Primary Assembly 29115 na manual_scaffold_120 unplaced-scaffold na na JAUMIU010000120.1 <> na Primary Assembly 28914 na manual_scaffold_121 unplaced-scaffold na na JAUMIU010000121.1 <> na Primary Assembly 27703 na manual_scaffold_122 unplaced-scaffold na na JAUMIU010000122.1 <> na Primary Assembly 27548 na manual_scaffold_123 unplaced-scaffold na na JAUMIU010000123.1 <> na Primary Assembly 27247 na manual_scaffold_124 unplaced-scaffold na na JAUMIU010000124.1 <> na Primary Assembly 26552 na manual_scaffold_125 unplaced-scaffold na na JAUMIU010000125.1 <> na Primary Assembly 26380 na manual_scaffold_126 unplaced-scaffold na na JAUMIU010000126.1 <> na Primary Assembly 26356 na manual_scaffold_127 unplaced-scaffold na na JAUMIU010000127.1 <> na Primary Assembly 25479 na manual_scaffold_128 unplaced-scaffold na na JAUMIU010000128.1 <> na Primary Assembly 25420 na manual_scaffold_129 unplaced-scaffold na na JAUMIU010000129.1 <> na Primary Assembly 25311 na manual_scaffold_130 unplaced-scaffold na na JAUMIU010000130.1 <> na Primary Assembly 25132 na manual_scaffold_131 unplaced-scaffold na na JAUMIU010000131.1 <> na Primary Assembly 24487 na manual_scaffold_132 unplaced-scaffold na na JAUMIU010000132.1 <> na Primary Assembly 23598 na manual_scaffold_133 unplaced-scaffold na na JAUMIU010000133.1 <> na Primary Assembly 23444 na manual_scaffold_134 unplaced-scaffold na na JAUMIU010000134.1 <> na Primary Assembly 23192 na manual_scaffold_135 unplaced-scaffold na na JAUMIU010000135.1 <> na Primary Assembly 21829 na manual_scaffold_136 unplaced-scaffold na na JAUMIU010000136.1 <> na Primary Assembly 21581 na manual_scaffold_137 unplaced-scaffold na na JAUMIU010000137.1 <> na Primary Assembly 21579 na manual_scaffold_139 unplaced-scaffold na na JAUMIU010000138.1 <> na Primary Assembly 20888 na manual_scaffold_138 unplaced-scaffold na na JAUMIU010000139.1 <> na Primary Assembly 20874 na manual_scaffold_140 unplaced-scaffold na na JAUMIU010000140.1 <> na Primary Assembly 19396 na manual_scaffold_141 unplaced-scaffold na na JAUMIU010000141.1 <> na Primary Assembly 19363 na manual_scaffold_142 unplaced-scaffold na na JAUMIU010000142.1 <> na Primary Assembly 19330 na manual_scaffold_143 unplaced-scaffold na na JAUMIU010000143.1 <> na Primary Assembly 18605 na manual_scaffold_144 unplaced-scaffold na na JAUMIU010000144.1 <> na Primary Assembly 18576 na manual_scaffold_145 unplaced-scaffold na na JAUMIU010000145.1 <> na Primary Assembly 18256 na manual_scaffold_146 unplaced-scaffold na na JAUMIU010000146.1 <> na Primary Assembly 8140 na manual_scaffold_147 unplaced-scaffold na na JAUMIU010000147.1 <> na Primary Assembly 2116 na mito assembled-molecule MT Mitochondrion CM061282.1 <> na non-nuclear 16985 na