# Assembly name: ASM3041531v1 # Organism name: Cryptosporidium parvum (apicomplexans) # Isolate: GD 22971 # Taxid: 5807 # BioSample: SAMN26265830 # BioProject: PRJNA810562 # Submitter: South China Agricultural University # Date: 2023-07-10 # Assembly type: haploid # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: JAKYWX01 # Assembly method: CLC v. 12.0.3 # Expected final version: no # Genome coverage: 95x # Sequencing technology: Illumina HiSeq 1500 # GenBank assembly accession: GCA_030415315.1 # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_030415385.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name 22971_contig_1 unplaced-scaffold na na JAKYWX010000014.1 <> na Primary Assembly 80561 na 22971_contig_10 unplaced-scaffold na na JAKYWX010000164.1 <> na Primary Assembly 118468 na 22971_contig_100 unplaced-scaffold na na JAKYWX010000093.1 <> na Primary Assembly 15913 na 22971_contig_101 unplaced-scaffold na na JAKYWX010000022.1 <> na Primary Assembly 19762 na 22971_contig_102 unplaced-scaffold na na JAKYWX010000083.1 <> na Primary Assembly 20682 na 22971_contig_103 unplaced-scaffold na na JAKYWX010000073.1 <> na Primary Assembly 18065 na 22971_contig_104 unplaced-scaffold na na JAKYWX010000092.1 <> na Primary Assembly 1749 na 22971_contig_105 unplaced-scaffold na na JAKYWX010000047.1 <> na Primary Assembly 41552 na 22971_contig_106 unplaced-scaffold na na JAKYWX010000154.1 <> na Primary Assembly 3868 na 22971_contig_107 unplaced-scaffold na na JAKYWX010000021.1 <> na Primary Assembly 18493 na 22971_contig_108 unplaced-scaffold na na JAKYWX010000028.1 <> na Primary Assembly 11065 na 22971_contig_109 unplaced-scaffold na na JAKYWX010000136.1 <> na Primary Assembly 6941 na 22971_contig_11 unplaced-scaffold na na JAKYWX010000005.1 <> na Primary Assembly 281615 na 22971_contig_110 unplaced-scaffold na na JAKYWX010000072.1 <> na Primary Assembly 4770 na 22971_contig_111 unplaced-scaffold na na JAKYWX010000135.1 <> na Primary Assembly 9904 na 22971_contig_112 unplaced-scaffold na na JAKYWX010000109.1 <> na Primary Assembly 24022 na 22971_contig_113 unplaced-scaffold na na JAKYWX010000069.1 <> na Primary Assembly 33127 na 22971_contig_114 unplaced-scaffold na na JAKYWX010000086.1 <> na Primary Assembly 4015 na 22971_contig_115 unplaced-scaffold na na JAKYWX010000169.1 <> na Primary Assembly 6690 na 22971_contig_116 unplaced-scaffold na na JAKYWX010000024.1 <> na Primary Assembly 14959 na 22971_contig_117 unplaced-scaffold na na JAKYWX010000063.1 <> na Primary Assembly 5533 na 22971_contig_118 unplaced-scaffold na na JAKYWX010000034.1 <> na Primary Assembly 7158 na 22971_contig_119 unplaced-scaffold na na JAKYWX010000152.1 <> na Primary Assembly 2341 na 22971_contig_12 unplaced-scaffold na na JAKYWX010000070.1 <> na Primary Assembly 23774 na 22971_contig_120 unplaced-scaffold na na JAKYWX010000159.1 <> na Primary Assembly 3862 na 22971_contig_121 unplaced-scaffold na na JAKYWX010000040.1 <> na Primary Assembly 7534 na 22971_contig_122 unplaced-scaffold na na JAKYWX010000191.1 <> na Primary Assembly 941 na 22971_contig_123 unplaced-scaffold na na JAKYWX010000096.1 <> na Primary Assembly 8616 na 22971_contig_124 unplaced-scaffold na na JAKYWX010000088.1 <> na Primary Assembly 5745 na 22971_contig_125 unplaced-scaffold na na JAKYWX010000148.1 <> na Primary Assembly 2760 na 22971_contig_126 unplaced-scaffold na na JAKYWX010000118.1 <> na Primary Assembly 25109 na 22971_contig_127 unplaced-scaffold na na JAKYWX010000184.1 <> na Primary Assembly 13648 na 22971_contig_128 unplaced-scaffold na na JAKYWX010000110.1 <> na Primary Assembly 1403 na 22971_contig_129 unplaced-scaffold na na JAKYWX010000060.1 <> na Primary Assembly 5285 na 22971_contig_13 unplaced-scaffold na na JAKYWX010000027.1 <> na Primary Assembly 367174 na 22971_contig_130 unplaced-scaffold na na JAKYWX010000019.1 <> na Primary Assembly 10085 na 22971_contig_131 unplaced-scaffold na na JAKYWX010000106.1 <> na Primary Assembly 3132 na 22971_contig_132 unplaced-scaffold na na JAKYWX010000017.1 <> na Primary Assembly 4753 na 22971_contig_133 unplaced-scaffold na na JAKYWX010000075.1 <> na Primary Assembly 6183 na 22971_contig_134 unplaced-scaffold na na JAKYWX010000035.1 <> na Primary Assembly 2468 na 22971_contig_135 unplaced-scaffold na na JAKYWX010000020.1 <> na Primary Assembly 5456 na 22971_contig_136 unplaced-scaffold na na JAKYWX010000125.1 <> na Primary Assembly 3785 na 22971_contig_137 unplaced-scaffold na na JAKYWX010000009.1 <> na Primary Assembly 3950 na 22971_contig_138 unplaced-scaffold na na JAKYWX010000013.1 <> na Primary Assembly 1860 na 22971_contig_139 unplaced-scaffold na na JAKYWX010000043.1 <> na Primary Assembly 5015 na 22971_contig_14 unplaced-scaffold na na JAKYWX010000054.1 <> na Primary Assembly 28641 na 22971_contig_140 unplaced-scaffold na na JAKYWX010000132.1 <> na Primary Assembly 9431 na 22971_contig_141 unplaced-scaffold na na JAKYWX010000105.1 <> na Primary Assembly 2555 na 22971_contig_142 unplaced-scaffold na na JAKYWX010000138.1 <> na Primary Assembly 7151 na 22971_contig_143 unplaced-scaffold na na JAKYWX010000077.1 <> na Primary Assembly 3889 na 22971_contig_144 unplaced-scaffold na na JAKYWX010000091.1 <> na Primary Assembly 2628 na 22971_contig_145 unplaced-scaffold na na JAKYWX010000192.1 <> na Primary Assembly 1807 na 22971_contig_146 unplaced-scaffold na na JAKYWX010000107.1 <> na Primary Assembly 6061 na 22971_contig_147 unplaced-scaffold na na JAKYWX010000153.1 <> na Primary Assembly 5002 na 22971_contig_148 unplaced-scaffold na na JAKYWX010000059.1 <> na Primary Assembly 846 na 22971_contig_149 unplaced-scaffold na na JAKYWX010000193.1 <> na Primary Assembly 1617 na 22971_contig_15 unplaced-scaffold na na JAKYWX010000170.1 <> na Primary Assembly 154802 na 22971_contig_150 unplaced-scaffold na na JAKYWX010000194.1 <> na Primary Assembly 779 na 22971_contig_151 unplaced-scaffold na na JAKYWX010000098.1 <> na Primary Assembly 3078 na 22971_contig_152 unplaced-scaffold na na JAKYWX010000067.1 <> na Primary Assembly 5175 na 22971_contig_153 unplaced-scaffold na na JAKYWX010000160.1 <> na Primary Assembly 1944 na 22971_contig_154 unplaced-scaffold na na JAKYWX010000189.1 <> na Primary Assembly 687 na 22971_contig_155 unplaced-scaffold na na JAKYWX010000048.1 <> na Primary Assembly 9176 na 22971_contig_156 unplaced-scaffold na na JAKYWX010000133.1 <> na Primary Assembly 6290 na 22971_contig_157 unplaced-scaffold na na JAKYWX010000130.1 <> na Primary Assembly 5289 na 22971_contig_158 unplaced-scaffold na na JAKYWX010000129.1 <> na Primary Assembly 7302 na 22971_contig_159 unplaced-scaffold na na JAKYWX010000007.1 <> na Primary Assembly 3331 na 22971_contig_16 unplaced-scaffold na na JAKYWX010000168.1 <> na Primary Assembly 223400 na 22971_contig_160 unplaced-scaffold na na JAKYWX010000128.1 <> na Primary Assembly 1399 na 22971_contig_161 unplaced-scaffold na na JAKYWX010000064.1 <> na Primary Assembly 5886 na 22971_contig_162 unplaced-scaffold na na JAKYWX010000195.1 <> na Primary Assembly 3227 na 22971_contig_163 unplaced-scaffold na na JAKYWX010000100.1 <> na Primary Assembly 4780 na 22971_contig_164 unplaced-scaffold na na JAKYWX010000151.1 <> na Primary Assembly 1247 na 22971_contig_165 unplaced-scaffold na na JAKYWX010000131.1 <> na Primary Assembly 4791 na 22971_contig_166 unplaced-scaffold na na JAKYWX010000157.1 <> na Primary Assembly 2059 na 22971_contig_167 unplaced-scaffold na na JAKYWX010000015.1 <> na Primary Assembly 2342 na 22971_contig_168 unplaced-scaffold na na JAKYWX010000127.1 <> na Primary Assembly 1798 na 22971_contig_169 unplaced-scaffold na na JAKYWX010000065.1 <> na Primary Assembly 1599 na 22971_contig_17 unplaced-scaffold na na JAKYWX010000179.1 <> na Primary Assembly 445272 na 22971_contig_170 unplaced-scaffold na na JAKYWX010000087.1 <> na Primary Assembly 1577 na 22971_contig_171 unplaced-scaffold na na JAKYWX010000062.1 <> na Primary Assembly 1222 na 22971_contig_172 unplaced-scaffold na na JAKYWX010000032.1 <> na Primary Assembly 701 na 22971_contig_173 unplaced-scaffold na na JAKYWX010000155.1 <> na Primary Assembly 1077 na 22971_contig_174 unplaced-scaffold na na JAKYWX010000089.1 <> na Primary Assembly 666 na 22971_contig_175 unplaced-scaffold na na JAKYWX010000103.1 <> na Primary Assembly 1815 na 22971_contig_176 unplaced-scaffold na na JAKYWX010000119.1 <> na Primary Assembly 1288 na 22971_contig_178 unplaced-scaffold na na JAKYWX010000196.1 <> na Primary Assembly 2363 na 22971_contig_179 unplaced-scaffold na na JAKYWX010000158.1 <> na Primary Assembly 562 na 22971_contig_18 unplaced-scaffold na na JAKYWX010000113.1 <> na Primary Assembly 139010 na 22971_contig_180 unplaced-scaffold na na JAKYWX010000120.1 <> na Primary Assembly 594 na 22971_contig_182 unplaced-scaffold na na JAKYWX010000122.1 <> na Primary Assembly 1490 na 22971_contig_183 unplaced-scaffold na na JAKYWX010000097.1 <> na Primary Assembly 1265 na 22971_contig_184 unplaced-scaffold na na JAKYWX010000102.1 <> na Primary Assembly 1563 na 22971_contig_185 unplaced-scaffold na na JAKYWX010000156.1 <> na Primary Assembly 783 na 22971_contig_186 unplaced-scaffold na na JAKYWX010000150.1 <> na Primary Assembly 543 na 22971_contig_187 unplaced-scaffold na na JAKYWX010000076.1 <> na Primary Assembly 544 na 22971_contig_188 unplaced-scaffold na na JAKYWX010000146.1 <> na Primary Assembly 2428 na 22971_contig_189 unplaced-scaffold na na JAKYWX010000104.1 <> na Primary Assembly 2741 na 22971_contig_19 unplaced-scaffold na na JAKYWX010000166.1 <> na Primary Assembly 418209 na 22971_contig_190 unplaced-scaffold na na JAKYWX010000121.1 <> na Primary Assembly 1272 na 22971_contig_191 unplaced-scaffold na na JAKYWX010000071.1 <> na Primary Assembly 665 na 22971_contig_192 unplaced-scaffold na na JAKYWX010000074.1 <> na Primary Assembly 720 na 22971_contig_194 unplaced-scaffold na na JAKYWX010000039.1 <> na Primary Assembly 608 na 22971_contig_195 unplaced-scaffold na na JAKYWX010000188.1 <> na Primary Assembly 549 na 22971_contig_196 unplaced-scaffold na na JAKYWX010000016.1 <> na Primary Assembly 639 na 22971_contig_197 unplaced-scaffold na na JAKYWX010000187.1 <> na Primary Assembly 900 na 22971_contig_198 unplaced-scaffold na na JAKYWX010000049.1 <> na Primary Assembly 555 na 22971_contig_199 unplaced-scaffold na na JAKYWX010000038.1 <> na Primary Assembly 651 na 22971_contig_2 unplaced-scaffold na na JAKYWX010000182.1 <> na Primary Assembly 31802 na 22971_contig_20 unplaced-scaffold na na JAKYWX010000142.1 <> na Primary Assembly 451740 na 22971_contig_21 unplaced-scaffold na na JAKYWX010000140.1 <> na Primary Assembly 19896 na 22971_contig_22 unplaced-scaffold na na JAKYWX010000112.1 <> na Primary Assembly 99419 na 22971_contig_23 unplaced-scaffold na na JAKYWX010000084.1 <> na Primary Assembly 95681 na 22971_contig_24 unplaced-scaffold na na JAKYWX010000186.1 <> na Primary Assembly 132725 na 22971_contig_25 unplaced-scaffold na na JAKYWX010000178.1 <> na Primary Assembly 150853 na 22971_contig_26 unplaced-scaffold na na JAKYWX010000095.1 <> na Primary Assembly 41387 na 22971_contig_27 unplaced-scaffold na na JAKYWX010000172.1 <> na Primary Assembly 31805 na 22971_contig_28 unplaced-scaffold na na JAKYWX010000026.1 <> na Primary Assembly 135898 na 22971_contig_29 unplaced-scaffold na na JAKYWX010000079.1 <> na Primary Assembly 59142 na 22971_contig_3 unplaced-scaffold na na JAKYWX010000046.1 <> na Primary Assembly 78364 na 22971_contig_30 unplaced-scaffold na na JAKYWX010000008.1 <> na Primary Assembly 21800 na 22971_contig_31 unplaced-scaffold na na JAKYWX010000081.1 <> na Primary Assembly 73651 na 22971_contig_32 unplaced-scaffold na na JAKYWX010000057.1 <> na Primary Assembly 6306 na 22971_contig_33 unplaced-scaffold na na JAKYWX010000004.1 <> na Primary Assembly 94577 na 22971_contig_34 unplaced-scaffold na na JAKYWX010000090.1 <> na Primary Assembly 35517 na 22971_contig_35 unplaced-scaffold na na JAKYWX010000147.1 <> na Primary Assembly 94965 na 22971_contig_36 unplaced-scaffold na na JAKYWX010000068.1 <> na Primary Assembly 19973 na 22971_contig_37 unplaced-scaffold na na JAKYWX010000116.1 <> na Primary Assembly 257953 na 22971_contig_38 unplaced-scaffold na na JAKYWX010000037.1 <> na Primary Assembly 79830 na 22971_contig_39 unplaced-scaffold na na JAKYWX010000052.1 <> na Primary Assembly 75470 na 22971_contig_4 unplaced-scaffold na na JAKYWX010000041.1 <> na Primary Assembly 486787 na 22971_contig_40 unplaced-scaffold na na JAKYWX010000006.1 <> na Primary Assembly 61785 na 22971_contig_41 unplaced-scaffold na na JAKYWX010000141.1 <> na Primary Assembly 147579 na 22971_contig_42 unplaced-scaffold na na JAKYWX010000058.1 <> na Primary Assembly 89902 na 22971_contig_43 unplaced-scaffold na na JAKYWX010000117.1 <> na Primary Assembly 66182 na 22971_contig_44 unplaced-scaffold na na JAKYWX010000101.1 <> na Primary Assembly 72169 na 22971_contig_45 unplaced-scaffold na na JAKYWX010000144.1 <> na Primary Assembly 190544 na 22971_contig_46 unplaced-scaffold na na JAKYWX010000111.1 <> na Primary Assembly 80660 na 22971_contig_47 unplaced-scaffold na na JAKYWX010000044.1 <> na Primary Assembly 209914 na 22971_contig_48 unplaced-scaffold na na JAKYWX010000082.1 <> na Primary Assembly 177679 na 22971_contig_49 unplaced-scaffold na na JAKYWX010000175.1 <> na Primary Assembly 32784 na 22971_contig_5 unplaced-scaffold na na JAKYWX010000036.1 <> na Primary Assembly 91648 na 22971_contig_50 unplaced-scaffold na na JAKYWX010000176.1 <> na Primary Assembly 72221 na 22971_contig_51 unplaced-scaffold na na JAKYWX010000145.1 <> na Primary Assembly 104120 na 22971_contig_52 unplaced-scaffold na na JAKYWX010000171.1 <> na Primary Assembly 125948 na 22971_contig_53 unplaced-scaffold na na JAKYWX010000124.1 <> na Primary Assembly 43875 na 22971_contig_54 unplaced-scaffold na na JAKYWX010000061.1 <> na Primary Assembly 33358 na 22971_contig_55 unplaced-scaffold na na JAKYWX010000001.1 <> na Primary Assembly 111607 na 22971_contig_56 unplaced-scaffold na na JAKYWX010000002.1 <> na Primary Assembly 125907 na 22971_contig_57 unplaced-scaffold na na JAKYWX010000165.1 <> na Primary Assembly 35079 na 22971_contig_58 unplaced-scaffold na na JAKYWX010000078.1 <> na Primary Assembly 23155 na 22971_contig_59 unplaced-scaffold na na JAKYWX010000174.1 <> na Primary Assembly 89126 na 22971_contig_6 unplaced-scaffold na na JAKYWX010000143.1 <> na Primary Assembly 91700 na 22971_contig_60 unplaced-scaffold na na JAKYWX010000114.1 <> na Primary Assembly 21504 na 22971_contig_61 unplaced-scaffold na na JAKYWX010000162.1 <> na Primary Assembly 93403 na 22971_contig_62 unplaced-scaffold na na JAKYWX010000161.1 <> na Primary Assembly 2356 na 22971_contig_63 unplaced-scaffold na na JAKYWX010000018.1 <> na Primary Assembly 41224 na 22971_contig_64 unplaced-scaffold na na JAKYWX010000029.1 <> na Primary Assembly 47440 na 22971_contig_65 unplaced-scaffold na na JAKYWX010000080.1 <> na Primary Assembly 73271 na 22971_contig_66 unplaced-scaffold na na JAKYWX010000167.1 <> na Primary Assembly 210607 na 22971_contig_67 unplaced-scaffold na na JAKYWX010000149.1 <> na Primary Assembly 2901 na 22971_contig_68 unplaced-scaffold na na JAKYWX010000056.1 <> na Primary Assembly 47298 na 22971_contig_69 unplaced-scaffold na na JAKYWX010000033.1 <> na Primary Assembly 29461 na 22971_contig_7 unplaced-scaffold na na JAKYWX010000123.1 <> na Primary Assembly 151380 na 22971_contig_70 unplaced-scaffold na na JAKYWX010000177.1 <> na Primary Assembly 69539 na 22971_contig_71 unplaced-scaffold na na JAKYWX010000025.1 <> na Primary Assembly 37956 na 22971_contig_72 unplaced-scaffold na na JAKYWX010000115.1 <> na Primary Assembly 83886 na 22971_contig_73 unplaced-scaffold na na JAKYWX010000023.1 <> na Primary Assembly 12538 na 22971_contig_74 unplaced-scaffold na na JAKYWX010000163.1 <> na Primary Assembly 10623 na 22971_contig_75 unplaced-scaffold na na JAKYWX010000003.1 <> na Primary Assembly 28608 na 22971_contig_76 unplaced-scaffold na na JAKYWX010000173.1 <> na Primary Assembly 27928 na 22971_contig_77 unplaced-scaffold na na JAKYWX010000108.1 <> na Primary Assembly 20040 na 22971_contig_78 unplaced-scaffold na na JAKYWX010000099.1 <> na Primary Assembly 5067 na 22971_contig_79 unplaced-scaffold na na JAKYWX010000180.1 <> na Primary Assembly 22201 na 22971_contig_8 unplaced-scaffold na na JAKYWX010000030.1 <> na Primary Assembly 32839 na 22971_contig_80 unplaced-scaffold na na JAKYWX010000010.1 <> na Primary Assembly 4064 na 22971_contig_81 unplaced-scaffold na na JAKYWX010000066.1 <> na Primary Assembly 12695 na 22971_contig_82 unplaced-scaffold na na JAKYWX010000185.1 <> na Primary Assembly 42100 na 22971_contig_83 unplaced-scaffold na na JAKYWX010000050.1 <> na Primary Assembly 27613 na 22971_contig_84 unplaced-scaffold na na JAKYWX010000012.1 <> na Primary Assembly 43624 na 22971_contig_85 unplaced-scaffold na na JAKYWX010000181.1 <> na Primary Assembly 23359 na 22971_contig_86 unplaced-scaffold na na JAKYWX010000139.1 <> na Primary Assembly 39143 na 22971_contig_87 unplaced-scaffold na na JAKYWX010000085.1 <> na Primary Assembly 45820 na 22971_contig_88 unplaced-scaffold na na JAKYWX010000183.1 <> na Primary Assembly 19742 na 22971_contig_89 unplaced-scaffold na na JAKYWX010000055.1 <> na Primary Assembly 61506 na 22971_contig_9 unplaced-scaffold na na JAKYWX010000031.1 <> na Primary Assembly 94328 na 22971_contig_90 unplaced-scaffold na na JAKYWX010000011.1 <> na Primary Assembly 10502 na 22971_contig_91 unplaced-scaffold na na JAKYWX010000134.1 <> na Primary Assembly 8062 na 22971_contig_92 unplaced-scaffold na na JAKYWX010000126.1 <> na Primary Assembly 22101 na 22971_contig_93 unplaced-scaffold na na JAKYWX010000053.1 <> na Primary Assembly 2580 na 22971_contig_94 unplaced-scaffold na na JAKYWX010000190.1 <> na Primary Assembly 780 na 22971_contig_95 unplaced-scaffold na na JAKYWX010000094.1 <> na Primary Assembly 38002 na 22971_contig_96 unplaced-scaffold na na JAKYWX010000137.1 <> na Primary Assembly 22364 na 22971_contig_97 unplaced-scaffold na na JAKYWX010000042.1 <> na Primary Assembly 5871 na 22971_contig_98 unplaced-scaffold na na JAKYWX010000045.1 <> na Primary Assembly 24678 na 22971_contig_99 unplaced-scaffold na na JAKYWX010000051.1 <> na Primary Assembly 13175 na