# Assembly name: ASM3001541v1 # Organism name: Cynopterus sphinx (Indian short-nosed fruit bat) # Isolate: CYSPWHU # Sex: female # Taxid: 9400 # BioSample: SAMN26443391 # BioProject: PRJNA812996 # Submitter: Wuhan University # Date: 2023-05-16 # Assembly type: haploid # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JAKZJJ01 # Assembly method: Nextdenovo v. 2.4.0 # Expected final version: yes # Genome coverage: 104.17x # Sequencing technology: Oxford Nanopore PromethION; Illumina NovaSeq # RefSeq category: Reference Genome # GenBank assembly accession: GCA_030015415.1 # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_030015435.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name chr1 assembled-molecule 1 Chromosome CM057379.1 <> na Primary Assembly 207365618 na chr2 assembled-molecule 2 Chromosome CM057380.1 <> na Primary Assembly 174194055 na chr3 assembled-molecule 3 Chromosome CM057381.1 <> na Primary Assembly 158004684 na chr4 assembled-molecule 4 Chromosome CM057382.1 <> na Primary Assembly 154139888 na chr5 assembled-molecule 5 Chromosome CM057383.1 <> na Primary Assembly 148064702 na chr6 assembled-molecule 6 Chromosome CM057384.1 <> na Primary Assembly 145152962 na chr7 assembled-molecule 7 Chromosome CM057385.1 <> na Primary Assembly 130951457 na chr8 assembled-molecule 8 Chromosome CM057386.1 <> na Primary Assembly 130657903 na chr9 assembled-molecule 9 Chromosome CM057387.1 <> na Primary Assembly 129731474 na chr10 assembled-molecule 10 Chromosome CM057388.1 <> na Primary Assembly 98250243 na chr11 assembled-molecule 11 Chromosome CM057389.1 <> na Primary Assembly 95035041 na chr12 assembled-molecule 12 Chromosome CM057390.1 <> na Primary Assembly 87717332 na chr13 assembled-molecule 13 Chromosome CM057391.1 <> na Primary Assembly 49211583 na chr14 assembled-molecule 14 Chromosome CM057392.1 <> na Primary Assembly 44246342 na chr15 assembled-molecule 15 Chromosome CM057393.1 <> na Primary Assembly 26471974 na chr16 assembled-molecule 16 Chromosome CM057394.1 <> na Primary Assembly 21456651 na chr17 assembled-molecule 17 Chromosome CM057395.1 <> na Primary Assembly 17264950 na Contig1 unplaced-scaffold na na JAKZJJ010000018.1 <> na Primary Assembly 822012 na Contig2 unplaced-scaffold na na JAKZJJ010000019.1 <> na Primary Assembly 766466 na Contig3 unplaced-scaffold na na JAKZJJ010000020.1 <> na Primary Assembly 760688 na Contig4 unplaced-scaffold na na JAKZJJ010000021.1 <> na Primary Assembly 741658 na Contig5 unplaced-scaffold na na JAKZJJ010000022.1 <> na Primary Assembly 682987 na Contig6 unplaced-scaffold na na JAKZJJ010000023.1 <> na Primary Assembly 658188 na Contig7 unplaced-scaffold na na JAKZJJ010000024.1 <> na Primary Assembly 625280 na Contig8 unplaced-scaffold na na JAKZJJ010000025.1 <> na Primary Assembly 576257 na Contig9 unplaced-scaffold na na JAKZJJ010000026.1 <> na Primary Assembly 539681 na Contig10 unplaced-scaffold na na JAKZJJ010000027.1 <> na Primary Assembly 530008 na Contig11 unplaced-scaffold na na JAKZJJ010000028.1 <> na Primary Assembly 492067 na Contig12 unplaced-scaffold na na JAKZJJ010000029.1 <> na Primary Assembly 485669 na Contig13 unplaced-scaffold na na JAKZJJ010000030.1 <> na Primary Assembly 471616 na Contig14 unplaced-scaffold na na JAKZJJ010000031.1 <> na Primary Assembly 467242 na Contig15 unplaced-scaffold na na JAKZJJ010000032.1 <> na Primary Assembly 462424 na Contig16 unplaced-scaffold na na JAKZJJ010000033.1 <> na Primary Assembly 449185 na Contig17 unplaced-scaffold na na JAKZJJ010000034.1 <> na Primary Assembly 440252 na Contig18 unplaced-scaffold na na JAKZJJ010000035.1 <> na Primary Assembly 409834 na Contig19 unplaced-scaffold na na JAKZJJ010000036.1 <> na Primary Assembly 391596 na Contig20 unplaced-scaffold na na JAKZJJ010000037.1 <> na Primary Assembly 390868 na Contig21 unplaced-scaffold na na JAKZJJ010000038.1 <> na Primary Assembly 358713 na Contig22 unplaced-scaffold na na JAKZJJ010000039.1 <> na Primary Assembly 357174 na Contig23 unplaced-scaffold na na JAKZJJ010000040.1 <> na Primary Assembly 354804 na Contig24 unplaced-scaffold na na JAKZJJ010000041.1 <> na Primary Assembly 348732 na Contig25 unplaced-scaffold na na JAKZJJ010000042.1 <> na Primary Assembly 338575 na Contig26 unplaced-scaffold na na JAKZJJ010000043.1 <> na Primary Assembly 334037 na Contig27 unplaced-scaffold na na JAKZJJ010000044.1 <> na Primary Assembly 321067 na Contig28 unplaced-scaffold na na JAKZJJ010000045.1 <> na Primary Assembly 306535 na Contig29 unplaced-scaffold na na JAKZJJ010000046.1 <> na Primary Assembly 303214 na Contig30 unplaced-scaffold na na JAKZJJ010000047.1 <> na Primary Assembly 292827 na Contig31 unplaced-scaffold na na JAKZJJ010000048.1 <> na Primary Assembly 292085 na Contig32 unplaced-scaffold na na JAKZJJ010000049.1 <> na Primary Assembly 289564 na Contig33 unplaced-scaffold na na JAKZJJ010000050.1 <> na Primary Assembly 288448 na Contig34 unplaced-scaffold na na JAKZJJ010000051.1 <> na Primary Assembly 282189 na Contig35 unplaced-scaffold na na JAKZJJ010000052.1 <> na Primary Assembly 272968 na Contig36 unplaced-scaffold na na JAKZJJ010000053.1 <> na Primary Assembly 268399 na Contig37 unplaced-scaffold na na JAKZJJ010000054.1 <> na Primary Assembly 268128 na Contig38 unplaced-scaffold na na JAKZJJ010000055.1 <> na Primary Assembly 267810 na Contig39 unplaced-scaffold na na JAKZJJ010000056.1 <> na Primary Assembly 267212 na Contig40 unplaced-scaffold na na JAKZJJ010000057.1 <> na Primary Assembly 265709 na Contig41 unplaced-scaffold na na JAKZJJ010000058.1 <> na Primary Assembly 264913 na Contig42 unplaced-scaffold na na JAKZJJ010000059.1 <> na Primary Assembly 264459 na Contig43 unplaced-scaffold na na JAKZJJ010000060.1 <> na Primary Assembly 262294 na Contig44 unplaced-scaffold na na JAKZJJ010000061.1 <> na Primary Assembly 259476 na Contig45 unplaced-scaffold na na JAKZJJ010000062.1 <> na Primary Assembly 258102 na Contig46 unplaced-scaffold na na JAKZJJ010000063.1 <> na Primary Assembly 257595 na Contig47 unplaced-scaffold na na JAKZJJ010000064.1 <> na Primary Assembly 257381 na Contig48 unplaced-scaffold na na JAKZJJ010000065.1 <> na Primary Assembly 255247 na Contig49 unplaced-scaffold na na JAKZJJ010000066.1 <> na Primary Assembly 251359 na Contig50 unplaced-scaffold na na JAKZJJ010000067.1 <> na Primary Assembly 251037 na Contig51 unplaced-scaffold na na JAKZJJ010000068.1 <> na Primary Assembly 246995 na Contig52 unplaced-scaffold na na JAKZJJ010000069.1 <> na Primary Assembly 245301 na Contig53 unplaced-scaffold na na JAKZJJ010000070.1 <> na Primary Assembly 245083 na Contig54 unplaced-scaffold na na JAKZJJ010000071.1 <> na Primary Assembly 237197 na Contig55 unplaced-scaffold na na JAKZJJ010000072.1 <> na Primary Assembly 235244 na Contig56 unplaced-scaffold na na JAKZJJ010000073.1 <> na Primary Assembly 231758 na Contig57 unplaced-scaffold na na JAKZJJ010000074.1 <> na Primary Assembly 231593 na Contig58 unplaced-scaffold na na JAKZJJ010000075.1 <> na Primary Assembly 228616 na Contig59 unplaced-scaffold na na JAKZJJ010000076.1 <> na Primary Assembly 226339 na Contig60 unplaced-scaffold na na JAKZJJ010000077.1 <> na Primary Assembly 221899 na Contig61 unplaced-scaffold na na JAKZJJ010000078.1 <> na Primary Assembly 219368 na Contig62 unplaced-scaffold na na JAKZJJ010000079.1 <> na Primary Assembly 217988 na Contig63 unplaced-scaffold na na JAKZJJ010000080.1 <> na Primary Assembly 217700 na Contig64 unplaced-scaffold na na JAKZJJ010000081.1 <> na Primary Assembly 217433 na Contig65 unplaced-scaffold na na JAKZJJ010000082.1 <> na Primary Assembly 217373 na Contig66 unplaced-scaffold na na JAKZJJ010000083.1 <> na Primary Assembly 214553 na Contig67 unplaced-scaffold na na JAKZJJ010000084.1 <> na Primary Assembly 211558 na Contig68 unplaced-scaffold na na JAKZJJ010000085.1 <> na Primary Assembly 210800 na Contig69 unplaced-scaffold na na JAKZJJ010000086.1 <> na Primary Assembly 210279 na Contig70 unplaced-scaffold na na JAKZJJ010000087.1 <> na Primary Assembly 209733 na Contig71 unplaced-scaffold na na JAKZJJ010000088.1 <> na Primary Assembly 208837 na Contig72 unplaced-scaffold na na JAKZJJ010000089.1 <> na Primary Assembly 206545 na Contig73 unplaced-scaffold na na JAKZJJ010000090.1 <> na Primary Assembly 205878 na Contig74 unplaced-scaffold na na JAKZJJ010000091.1 <> na Primary Assembly 204913 na Contig75 unplaced-scaffold na na JAKZJJ010000092.1 <> na Primary Assembly 202955 na Contig76 unplaced-scaffold na na JAKZJJ010000093.1 <> na Primary Assembly 202822 na Contig77 unplaced-scaffold na na JAKZJJ010000094.1 <> na Primary Assembly 202039 na Contig78 unplaced-scaffold na na JAKZJJ010000095.1 <> na Primary Assembly 197393 na Contig79 unplaced-scaffold na na JAKZJJ010000096.1 <> na Primary Assembly 196330 na Contig80 unplaced-scaffold na na JAKZJJ010000097.1 <> na Primary Assembly 194797 na Contig81 unplaced-scaffold na na JAKZJJ010000098.1 <> na Primary Assembly 194121 na Contig82 unplaced-scaffold na na JAKZJJ010000099.1 <> na Primary Assembly 193822 na Contig83 unplaced-scaffold na na JAKZJJ010000100.1 <> na Primary Assembly 192957 na Contig84 unplaced-scaffold na na JAKZJJ010000101.1 <> na Primary Assembly 192186 na Contig85 unplaced-scaffold na na JAKZJJ010000102.1 <> na Primary Assembly 191295 na Contig86 unplaced-scaffold na na JAKZJJ010000103.1 <> na Primary Assembly 190326 na Contig87 unplaced-scaffold na na JAKZJJ010000104.1 <> na Primary Assembly 189547 na Contig88 unplaced-scaffold na na JAKZJJ010000105.1 <> na Primary Assembly 186295 na Contig89 unplaced-scaffold na na JAKZJJ010000106.1 <> na Primary Assembly 185900 na Contig90 unplaced-scaffold na na JAKZJJ010000107.1 <> na Primary Assembly 185746 na Contig91 unplaced-scaffold na na JAKZJJ010000108.1 <> na Primary Assembly 185717 na Contig92 unplaced-scaffold na na JAKZJJ010000109.1 <> na Primary Assembly 185285 na Contig93 unplaced-scaffold na na JAKZJJ010000110.1 <> na Primary Assembly 184738 na Contig94 unplaced-scaffold na na JAKZJJ010000111.1 <> na Primary Assembly 181856 na Contig95 unplaced-scaffold na na JAKZJJ010000112.1 <> na Primary Assembly 180776 na Contig96 unplaced-scaffold na na JAKZJJ010000113.1 <> na Primary Assembly 179551 na Contig97 unplaced-scaffold na na JAKZJJ010000114.1 <> na Primary Assembly 178096 na Contig98 unplaced-scaffold na na JAKZJJ010000115.1 <> na Primary Assembly 176416 na Contig99 unplaced-scaffold na na JAKZJJ010000116.1 <> na Primary Assembly 176240 na Contig100 unplaced-scaffold na na JAKZJJ010000117.1 <> na Primary Assembly 175897 na Contig101 unplaced-scaffold na na JAKZJJ010000118.1 <> na Primary Assembly 174799 na Contig102 unplaced-scaffold na na JAKZJJ010000119.1 <> na Primary Assembly 173681 na Contig103 unplaced-scaffold na na JAKZJJ010000120.1 <> na Primary Assembly 173622 na Contig104 unplaced-scaffold na na JAKZJJ010000121.1 <> na Primary Assembly 172719 na Contig105 unplaced-scaffold na na JAKZJJ010000122.1 <> na Primary Assembly 171909 na Contig106 unplaced-scaffold na na JAKZJJ010000123.1 <> na Primary Assembly 171734 na Contig107 unplaced-scaffold na na JAKZJJ010000124.1 <> na Primary Assembly 171723 na Contig108 unplaced-scaffold na na JAKZJJ010000125.1 <> na Primary Assembly 170457 na Contig109 unplaced-scaffold na na JAKZJJ010000126.1 <> na Primary Assembly 169076 na Contig110 unplaced-scaffold na na JAKZJJ010000127.1 <> na Primary Assembly 167220 na Contig111 unplaced-scaffold na na JAKZJJ010000128.1 <> na Primary Assembly 165142 na Contig112 unplaced-scaffold na na JAKZJJ010000129.1 <> na Primary Assembly 163647 na Contig113 unplaced-scaffold na na JAKZJJ010000130.1 <> na Primary Assembly 163329 na Contig114 unplaced-scaffold na na JAKZJJ010000131.1 <> na Primary Assembly 162138 na Contig115 unplaced-scaffold na na JAKZJJ010000132.1 <> na Primary Assembly 161066 na Contig116 unplaced-scaffold na na JAKZJJ010000133.1 <> na Primary Assembly 158584 na Contig117 unplaced-scaffold na na JAKZJJ010000134.1 <> na Primary Assembly 155004 na Contig118 unplaced-scaffold na na JAKZJJ010000135.1 <> na Primary Assembly 154527 na Contig119 unplaced-scaffold na na JAKZJJ010000136.1 <> na Primary Assembly 153853 na Contig120 unplaced-scaffold na na JAKZJJ010000137.1 <> na Primary Assembly 153803 na Contig121 unplaced-scaffold na na JAKZJJ010000138.1 <> na Primary Assembly 153644 na Contig122 unplaced-scaffold na na JAKZJJ010000139.1 <> na Primary Assembly 153279 na Contig123 unplaced-scaffold na na JAKZJJ010000140.1 <> na Primary Assembly 153027 na Contig124 unplaced-scaffold na na JAKZJJ010000141.1 <> na Primary Assembly 152930 na Contig125 unplaced-scaffold na na JAKZJJ010000142.1 <> na Primary Assembly 149535 na Contig126 unplaced-scaffold na na JAKZJJ010000143.1 <> na Primary Assembly 148485 na Contig127 unplaced-scaffold na na JAKZJJ010000144.1 <> na Primary Assembly 144142 na Contig128 unplaced-scaffold na na JAKZJJ010000145.1 <> na Primary Assembly 143886 na Contig129 unplaced-scaffold na na JAKZJJ010000146.1 <> na Primary Assembly 143587 na Contig130 unplaced-scaffold na na JAKZJJ010000147.1 <> na Primary Assembly 143478 na Contig131 unplaced-scaffold na na JAKZJJ010000148.1 <> na Primary Assembly 143320 na Contig132 unplaced-scaffold na na JAKZJJ010000149.1 <> na Primary Assembly 143144 na Contig133 unplaced-scaffold na na JAKZJJ010000150.1 <> na Primary Assembly 141128 na Contig134 unplaced-scaffold na na JAKZJJ010000151.1 <> na Primary Assembly 141070 na Contig135 unplaced-scaffold na na JAKZJJ010000152.1 <> na Primary Assembly 140946 na Contig136 unplaced-scaffold na na JAKZJJ010000153.1 <> na Primary Assembly 139748 na Contig137 unplaced-scaffold na na JAKZJJ010000154.1 <> na Primary Assembly 139577 na Contig138 unplaced-scaffold na na JAKZJJ010000155.1 <> na Primary Assembly 137171 na Contig139 unplaced-scaffold na na JAKZJJ010000156.1 <> na Primary Assembly 136812 na Contig140 unplaced-scaffold na na JAKZJJ010000157.1 <> na Primary Assembly 135020 na Contig141 unplaced-scaffold na na JAKZJJ010000158.1 <> na Primary Assembly 134218 na Contig142 unplaced-scaffold na na JAKZJJ010000159.1 <> na Primary Assembly 133726 na Contig143 unplaced-scaffold na na JAKZJJ010000160.1 <> na Primary Assembly 133714 na Contig144 unplaced-scaffold na na JAKZJJ010000161.1 <> na Primary Assembly 133344 na Contig145 unplaced-scaffold na na JAKZJJ010000162.1 <> na Primary Assembly 133080 na Contig146 unplaced-scaffold na na JAKZJJ010000163.1 <> na Primary Assembly 132321 na Contig147 unplaced-scaffold na na JAKZJJ010000164.1 <> na Primary Assembly 129469 na Contig148 unplaced-scaffold na na JAKZJJ010000165.1 <> na Primary Assembly 128343 na Contig149 unplaced-scaffold na na JAKZJJ010000166.1 <> na Primary Assembly 127530 na Contig150 unplaced-scaffold na na JAKZJJ010000167.1 <> na Primary Assembly 126721 na Contig151 unplaced-scaffold na na JAKZJJ010000168.1 <> na Primary Assembly 125173 na Contig152 unplaced-scaffold na na JAKZJJ010000169.1 <> na Primary Assembly 123282 na Contig153 unplaced-scaffold na na JAKZJJ010000170.1 <> na Primary Assembly 123145 na Contig154 unplaced-scaffold na na JAKZJJ010000171.1 <> na Primary Assembly 119295 na Contig155 unplaced-scaffold na na JAKZJJ010000172.1 <> na Primary Assembly 118964 na Contig156 unplaced-scaffold na na JAKZJJ010000173.1 <> na Primary Assembly 116539 na Contig157 unplaced-scaffold na na JAKZJJ010000174.1 <> na Primary Assembly 116300 na Contig158 unplaced-scaffold na na JAKZJJ010000175.1 <> na Primary Assembly 115698 na Contig159 unplaced-scaffold na na JAKZJJ010000176.1 <> na Primary Assembly 112396 na Contig160 unplaced-scaffold na na JAKZJJ010000177.1 <> na Primary Assembly 109918 na Contig161 unplaced-scaffold na na JAKZJJ010000178.1 <> na Primary Assembly 109471 na Contig162 unplaced-scaffold na na JAKZJJ010000179.1 <> na Primary Assembly 106158 na Contig163 unplaced-scaffold na na JAKZJJ010000180.1 <> na Primary Assembly 101580 na Contig164 unplaced-scaffold na na JAKZJJ010000181.1 <> na Primary Assembly 100736 na