# Assembly name: ASM2974843v1 # Organism name: Caenorhabditis elegans (nematodes) # Infraspecific name: strain=BY250 # Taxid: 6239 # BioSample: SAMN14682971 # BioProject: PRJNA627737 # Submitter: University of Alabama # Date: 2023-04-18 # Assembly type: haploid # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JACBPA01 # Assembly method: Canu v. 1.9; Flye v. 2.8.1 # Expected final version: no # Reference guided assembly: GCA_000002985.3 # Genome coverage: 114.38x # Sequencing technology: Oxford Nanopore GridION # GenBank assembly accession: GCA_029748435.1 # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_029748445.1 Primary Assembly ## GCA_029748455.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name I assembled-molecule I Chromosome CM056513.1 <> na Primary Assembly 15374199 na II assembled-molecule II Chromosome CM056514.1 <> na Primary Assembly 15520085 na III assembled-molecule III Chromosome CM056515.1 <> na Primary Assembly 14068403 na IV assembled-molecule IV Chromosome CM056516.1 <> na Primary Assembly 17853313 na V assembled-molecule V Chromosome CM056517.1 <> na Primary Assembly 21087219 na X assembled-molecule X Chromosome CM056518.1 <> na Primary Assembly 17971375 na contig_101 unplaced-scaffold na na JACBPA010000008.1 <> na Primary Assembly 27452 na contig_104 unplaced-scaffold na na JACBPA010000009.1 <> na Primary Assembly 20508 na contig_111_1_8967_+ unplaced-scaffold na na JACBPA010000010.1 <> na Primary Assembly 8967 na contig_116_572913_642925_+ unplaced-scaffold na na JACBPA010000011.1 <> na Primary Assembly 70013 na contig_123 unplaced-scaffold na na JACBPA010000012.1 <> na Primary Assembly 8882 na contig_132 unplaced-scaffold na na JACBPA010000013.1 <> na Primary Assembly 25998 na contig_133 unplaced-scaffold na na JACBPA010000014.1 <> na Primary Assembly 5578 na contig_137 unplaced-scaffold na na JACBPA010000015.1 <> na Primary Assembly 3325 na contig_147 unplaced-scaffold na na JACBPA010000016.1 <> na Primary Assembly 3633 na contig_14_2677224_2688452_+ unplaced-scaffold na na JACBPA010000017.1 <> na Primary Assembly 11229 na contig_152_973706_996105_+ unplaced-scaffold na na JACBPA010000018.1 <> na Primary Assembly 22400 na contig_153 unplaced-scaffold na na JACBPA010000019.1 <> na Primary Assembly 23216 na contig_155_1_15070_+ unplaced-scaffold na na JACBPA010000020.1 <> na Primary Assembly 15070 na contig_155_303303_315228_+ unplaced-scaffold na na JACBPA010000021.1 <> na Primary Assembly 11926 na contig_157 unplaced-scaffold na na JACBPA010000022.1 <> na Primary Assembly 3134 na contig_162 unplaced-scaffold na na JACBPA010000023.1 <> na Primary Assembly 5198 na contig_164 unplaced-scaffold na na JACBPA010000024.1 <> na Primary Assembly 4387 na contig_165 unplaced-scaffold na na JACBPA010000025.1 <> na Primary Assembly 8299 na contig_166 unplaced-scaffold na na JACBPA010000026.1 <> na Primary Assembly 2847 na contig_169 unplaced-scaffold na na JACBPA010000027.1 <> na Primary Assembly 42037 na contig_179 unplaced-scaffold na na JACBPA010000028.1 <> na Primary Assembly 20267 na contig_185_545913_549414_+ unplaced-scaffold na na JACBPA010000029.1 <> na Primary Assembly 3502 na contig_189_14230_15541_+ unplaced-scaffold na na JACBPA010000030.1 <> na Primary Assembly 1312 na contig_189_1_14229_+ unplaced-scaffold na na JACBPA010000031.1 <> na Primary Assembly 14229 na contig_2_4188924_4196002_+ unplaced-scaffold na na JACBPA010000032.1 <> na Primary Assembly 7079 na contig_31 unplaced-scaffold na na JACBPA010000033.1 <> na Primary Assembly 7524 na contig_45_1_13722_+ unplaced-scaffold na na JACBPA010000034.1 <> na Primary Assembly 13722 na contig_47_1_12762_+ unplaced-scaffold na na JACBPA010000035.1 <> na Primary Assembly 12762 na contig_62 unplaced-scaffold na na JACBPA010000036.1 <> na Primary Assembly 8226 na contig_70_1_28783_+ unplaced-scaffold na na JACBPA010000037.1 <> na Primary Assembly 28783 na contig_72_1_14278_+ unplaced-scaffold na na JACBPA010000039.1 <> na Primary Assembly 14278 na contig_77_1_23403_+ unplaced-scaffold na na JACBPA010000040.1 <> na Primary Assembly 23403 na contig_77_432041_442167_+ unplaced-scaffold na na JACBPA010000041.1 <> na Primary Assembly 10127 na contig_83 unplaced-scaffold na na JACBPA010000042.1 <> na Primary Assembly 14434 na contig_90 unplaced-scaffold na na JACBPA010000043.1 <> na Primary Assembly 7912 na scaffold_17_1116224_1162345_+ unplaced-scaffold na na JACBPA010000044.1 <> na Primary Assembly 46122 na scaffold_17_1_6195_+ unplaced-scaffold na na JACBPA010000045.1 <> na Primary Assembly 6195 na scaffold_79_1_9694_+ unplaced-scaffold na na JACBPA010000046.1 <> na Primary Assembly 9694 na MtDNA unlocalized-scaffold MT Mitochondrion JACBPA010000005.1 <> na non-nuclear 12292 na contig_71 unlocalized-scaffold MT Mitochondrion JACBPA010000038.1 <> na non-nuclear 1661 na