# Assembly name: ASM2916883v1 # Organism name: Giardia duodenalis (diplomonads) # Isolate: P387 # Taxid: 5741 # BioSample: SAMN30804747 # BioProject: PRJNA879307 # Submitter: Robert Koch-Institut # Date: 2023-03-13 # Assembly type: haploid # Release type: major # Assembly level: Scaffold # Genome representation: full # WGS project: JAQPSC01 # Assembly method: Miniasm v. MAY-2020; Racon v. MAY-2020 # Expected final version: yes # Genome coverage: 53x # Sequencing technology: PacBio RS # GenBank assembly accession: GCA_029168835.1 # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_029168895.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name GD_P387_contig001.1 unplaced-scaffold na na JAQPSC010000001.1 <> na Primary Assembly 511723 na GD_P387_contig002.1 unplaced-scaffold na na JAQPSC010000002.1 <> na Primary Assembly 496605 na GD_P387_contig003.1 unplaced-scaffold na na JAQPSC010000003.1 <> na Primary Assembly 496469 na GD_P387_contig004.1 unplaced-scaffold na na JAQPSC010000004.1 <> na Primary Assembly 458517 na GD_P387_contig005.1 unplaced-scaffold na na JAQPSC010000005.1 <> na Primary Assembly 428893 na GD_P387_contig006.1 unplaced-scaffold na na JAQPSC010000006.1 <> na Primary Assembly 404770 na GD_P387_contig007.1 unplaced-scaffold na na JAQPSC010000007.1 <> na Primary Assembly 395302 na GD_P387_contig008.1 unplaced-scaffold na na JAQPSC010000008.1 <> na Primary Assembly 317059 na GD_P387_contig009.1 unplaced-scaffold na na JAQPSC010000009.1 <> na Primary Assembly 281395 na GD_P387_contig010.1 unplaced-scaffold na na JAQPSC010000010.1 <> na Primary Assembly 267742 na GD_P387_contig011.1 unplaced-scaffold na na JAQPSC010000011.1 <> na Primary Assembly 265117 na GD_P387_contig012.1 unplaced-scaffold na na JAQPSC010000012.1 <> na Primary Assembly 252250 na GD_P387_contig013.1 unplaced-scaffold na na JAQPSC010000013.1 <> na Primary Assembly 234501 na GD_P387_contig014.1 unplaced-scaffold na na JAQPSC010000014.1 <> na Primary Assembly 229790 na GD_P387_contig015.1 unplaced-scaffold na na JAQPSC010000015.1 <> na Primary Assembly 222529 na GD_P387_contig016.1 unplaced-scaffold na na JAQPSC010000016.1 <> na Primary Assembly 174582 na GD_P387_contig017.1 unplaced-scaffold na na JAQPSC010000017.1 <> na Primary Assembly 172297 na GD_P387_contig018.1 unplaced-scaffold na na JAQPSC010000018.1 <> na Primary Assembly 168202 na GD_P387_contig019.1 unplaced-scaffold na na JAQPSC010000019.1 <> na Primary Assembly 167273 na GD_P387_contig020.1 unplaced-scaffold na na JAQPSC010000020.1 <> na Primary Assembly 162420 na GD_P387_contig021.1 unplaced-scaffold na na JAQPSC010000021.1 <> na Primary Assembly 156567 na GD_P387_contig022.1 unplaced-scaffold na na JAQPSC010000022.1 <> na Primary Assembly 154044 na GD_P387_contig023.1 unplaced-scaffold na na JAQPSC010000023.1 <> na Primary Assembly 148932 na GD_P387_contig024.1 unplaced-scaffold na na JAQPSC010000024.1 <> na Primary Assembly 145569 na GD_P387_contig025.1 unplaced-scaffold na na JAQPSC010000025.1 <> na Primary Assembly 141830 na GD_P387_contig026.1 unplaced-scaffold na na JAQPSC010000026.1 <> na Primary Assembly 130526 na GD_P387_contig027.1 unplaced-scaffold na na JAQPSC010000027.1 <> na Primary Assembly 128790 na GD_P387_contig028.1 unplaced-scaffold na na JAQPSC010000028.1 <> na Primary Assembly 122275 na GD_P387_contig029.1 unplaced-scaffold na na JAQPSC010000029.1 <> na Primary Assembly 121741 na GD_P387_contig030.1 unplaced-scaffold na na JAQPSC010000030.1 <> na Primary Assembly 117878 na GD_P387_contig031.1 unplaced-scaffold na na JAQPSC010000031.1 <> na Primary Assembly 108751 na GD_P387_contig032.1 unplaced-scaffold na na JAQPSC010000032.1 <> na Primary Assembly 106943 na GD_P387_contig033.1 unplaced-scaffold na na JAQPSC010000033.1 <> na Primary Assembly 103959 na GD_P387_contig034.1 unplaced-scaffold na na JAQPSC010000034.1 <> na Primary Assembly 96426 na GD_P387_contig035.1 unplaced-scaffold na na JAQPSC010000035.1 <> na Primary Assembly 94051 na GD_P387_contig036.1 unplaced-scaffold na na JAQPSC010000036.1 <> na Primary Assembly 90532 na GD_P387_contig037.1 unplaced-scaffold na na JAQPSC010000037.1 <> na Primary Assembly 89618 na GD_P387_contig038.1 unplaced-scaffold na na JAQPSC010000038.1 <> na Primary Assembly 86323 na GD_P387_contig039.1 unplaced-scaffold na na JAQPSC010000039.1 <> na Primary Assembly 85879 na GD_P387_contig040.1 unplaced-scaffold na na JAQPSC010000040.1 <> na Primary Assembly 79256 na GD_P387_contig041.1 unplaced-scaffold na na JAQPSC010000041.1 <> na Primary Assembly 79074 na GD_P387_contig042.1 unplaced-scaffold na na JAQPSC010000042.1 <> na Primary Assembly 75139 na GD_P387_contig043.1 unplaced-scaffold na na JAQPSC010000043.1 <> na Primary Assembly 74706 na GD_P387_contig044.1 unplaced-scaffold na na JAQPSC010000044.1 <> na Primary Assembly 73621 na GD_P387_contig045.1 unplaced-scaffold na na JAQPSC010000045.1 <> na Primary Assembly 71602 na GD_P387_contig046.1 unplaced-scaffold na na JAQPSC010000046.1 <> na Primary Assembly 68326 na GD_P387_contig047.1 unplaced-scaffold na na JAQPSC010000047.1 <> na Primary Assembly 65799 na GD_P387_contig048.1 unplaced-scaffold na na JAQPSC010000048.1 <> na Primary Assembly 63405 na GD_P387_contig049.1 unplaced-scaffold na na JAQPSC010000049.1 <> na Primary Assembly 61914 na GD_P387_contig050.1 unplaced-scaffold na na JAQPSC010000050.1 <> na Primary Assembly 61711 na GD_P387_contig051.1 unplaced-scaffold na na JAQPSC010000051.1 <> na Primary Assembly 59755 na GD_P387_contig052.1 unplaced-scaffold na na JAQPSC010000052.1 <> na Primary Assembly 59081 na GD_P387_contig053.1 unplaced-scaffold na na JAQPSC010000053.1 <> na Primary Assembly 59079 na GD_P387_contig054.1 unplaced-scaffold na na JAQPSC010000054.1 <> na Primary Assembly 57778 na GD_P387_contig055.1 unplaced-scaffold na na JAQPSC010000055.1 <> na Primary Assembly 57547 na GD_P387_contig056.1 unplaced-scaffold na na JAQPSC010000056.1 <> na Primary Assembly 53721 na GD_P387_contig057.1 unplaced-scaffold na na JAQPSC010000057.1 <> na Primary Assembly 53217 na GD_P387_contig058.1 unplaced-scaffold na na JAQPSC010000058.1 <> na Primary Assembly 52246 na GD_P387_contig059.1 unplaced-scaffold na na JAQPSC010000059.1 <> na Primary Assembly 51102 na GD_P387_contig060.1 unplaced-scaffold na na JAQPSC010000060.1 <> na Primary Assembly 50384 na GD_P387_contig061.1 unplaced-scaffold na na JAQPSC010000061.1 <> na Primary Assembly 45852 na GD_P387_contig062.1 unplaced-scaffold na na JAQPSC010000062.1 <> na Primary Assembly 45106 na GD_P387_contig063.1 unplaced-scaffold na na JAQPSC010000063.1 <> na Primary Assembly 43771 na GD_P387_contig064.1 unplaced-scaffold na na JAQPSC010000064.1 <> na Primary Assembly 43414 na GD_P387_contig065.1 unplaced-scaffold na na JAQPSC010000065.1 <> na Primary Assembly 42277 na GD_P387_contig066.1 unplaced-scaffold na na JAQPSC010000066.1 <> na Primary Assembly 42024 na GD_P387_contig067.1 unplaced-scaffold na na JAQPSC010000067.1 <> na Primary Assembly 41575 na GD_P387_contig068.1 unplaced-scaffold na na JAQPSC010000068.1 <> na Primary Assembly 38352 na GD_P387_contig069.1 unplaced-scaffold na na JAQPSC010000069.1 <> na Primary Assembly 38211 na GD_P387_contig070.1 unplaced-scaffold na na JAQPSC010000070.1 <> na Primary Assembly 34108 na GD_P387_contig071.1 unplaced-scaffold na na JAQPSC010000071.1 <> na Primary Assembly 33144 na GD_P387_contig072.1 unplaced-scaffold na na JAQPSC010000072.1 <> na Primary Assembly 32865 na GD_P387_contig073.1 unplaced-scaffold na na JAQPSC010000073.1 <> na Primary Assembly 31624 na GD_P387_contig074.1 unplaced-scaffold na na JAQPSC010000074.1 <> na Primary Assembly 30475 na GD_P387_contig075.1 unplaced-scaffold na na JAQPSC010000075.1 <> na Primary Assembly 29264 na GD_P387_contig076.1 unplaced-scaffold na na JAQPSC010000076.1 <> na Primary Assembly 29236 na GD_P387_contig077.1 unplaced-scaffold na na JAQPSC010000077.1 <> na Primary Assembly 28286 na GD_P387_contig078.1 unplaced-scaffold na na JAQPSC010000078.1 <> na Primary Assembly 28077 na GD_P387_contig079.1 unplaced-scaffold na na JAQPSC010000079.1 <> na Primary Assembly 27591 na GD_P387_contig080.1 unplaced-scaffold na na JAQPSC010000080.1 <> na Primary Assembly 27065 na GD_P387_contig081.1 unplaced-scaffold na na JAQPSC010000081.1 <> na Primary Assembly 24509 na GD_P387_contig082.1 unplaced-scaffold na na JAQPSC010000082.1 <> na Primary Assembly 23656 na GD_P387_contig083.1 unplaced-scaffold na na JAQPSC010000083.1 <> na Primary Assembly 21615 na GD_P387_contig084.1 unplaced-scaffold na na JAQPSC010000084.1 <> na Primary Assembly 17888 na GD_P387_contig085.1 unplaced-scaffold na na JAQPSC010000085.1 <> na Primary Assembly 17358 na GD_P387_contig086.1 unplaced-scaffold na na JAQPSC010000086.1 <> na Primary Assembly 16710 na GD_P387_contig087.1 unplaced-scaffold na na JAQPSC010000087.1 <> na Primary Assembly 16138 na GD_P387_contig088.1 unplaced-scaffold na na JAQPSC010000088.1 <> na Primary Assembly 15045 na GD_P387_contig089.1 unplaced-scaffold na na JAQPSC010000089.1 <> na Primary Assembly 14961 na GD_P387_contig090.1 unplaced-scaffold na na JAQPSC010000090.1 <> na Primary Assembly 14934 na GD_P387_contig091.1 unplaced-scaffold na na JAQPSC010000091.1 <> na Primary Assembly 14891 na GD_P387_contig092.1 unplaced-scaffold na na JAQPSC010000092.1 <> na Primary Assembly 14336 na GD_P387_contig093.1 unplaced-scaffold na na JAQPSC010000093.1 <> na Primary Assembly 13527 na GD_P387_contig094.1 unplaced-scaffold na na JAQPSC010000094.1 <> na Primary Assembly 12150 na GD_P387_contig095.1 unplaced-scaffold na na JAQPSC010000095.1 <> na Primary Assembly 12125 na GD_P387_contig096.1 unplaced-scaffold na na JAQPSC010000096.1 <> na Primary Assembly 12034 na GD_P387_contig097.1 unplaced-scaffold na na JAQPSC010000097.1 <> na Primary Assembly 11237 na GD_P387_contig098.1 unplaced-scaffold na na JAQPSC010000098.1 <> na Primary Assembly 11115 na GD_P387_contig099.1 unplaced-scaffold na na JAQPSC010000099.1 <> na Primary Assembly 10923 na GD_P387_contig100.1 unplaced-scaffold na na JAQPSC010000100.1 <> na Primary Assembly 10706 na GD_P387_contig101.1 unplaced-scaffold na na JAQPSC010000101.1 <> na Primary Assembly 10436 na GD_P387_contig102.1 unplaced-scaffold na na JAQPSC010000102.1 <> na Primary Assembly 10145 na GD_P387_contig103.1 unplaced-scaffold na na JAQPSC010000103.1 <> na Primary Assembly 9852 na GD_P387_contig104.1 unplaced-scaffold na na JAQPSC010000104.1 <> na Primary Assembly 9723 na GD_P387_contig105.1 unplaced-scaffold na na JAQPSC010000105.1 <> na Primary Assembly 9332 na GD_P387_contig106.1 unplaced-scaffold na na JAQPSC010000106.1 <> na Primary Assembly 8680 na GD_P387_contig107.1 unplaced-scaffold na na JAQPSC010000107.1 <> na Primary Assembly 7899 na GD_P387_contig108.1 unplaced-scaffold na na JAQPSC010000108.1 <> na Primary Assembly 5868 na GD_P387_contig109.1 unplaced-scaffold na na JAQPSC010000109.1 <> na Primary Assembly 5848 na GD_P387_contig110.1 unplaced-scaffold na na JAQPSC010000110.1 <> na Primary Assembly 5656 na GD_P387_contig111.1 unplaced-scaffold na na JAQPSC010000111.1 <> na Primary Assembly 5404 na GD_P387_contig112.1 unplaced-scaffold na na JAQPSC010000112.1 <> na Primary Assembly 4956 na GD_P387_contig113.1 unplaced-scaffold na na JAQPSC010000113.1 <> na Primary Assembly 3553 na GD_P387_contig114.1 unplaced-scaffold na na JAQPSC010000114.1 <> na Primary Assembly 3520 na GD_P387_contig115.1 unplaced-scaffold na na JAQPSC010000115.1 <> na Primary Assembly 3466 na GD_P387_contig116.1 unplaced-scaffold na na JAQPSC010000116.1 <> na Primary Assembly 3167 na GD_P387_contig117.1 unplaced-scaffold na na JAQPSC010000117.1 <> na Primary Assembly 3076 na GD_P387_contig118.1 unplaced-scaffold na na JAQPSC010000118.1 <> na Primary Assembly 2624 na GD_P387_contig119.1 unplaced-scaffold na na JAQPSC010000119.1 <> na Primary Assembly 2615 na GD_P387_contig120.1 unplaced-scaffold na na JAQPSC010000120.1 <> na Primary Assembly 1891 na GD_P387_contig121.1 unplaced-scaffold na na JAQPSC010000121.1 <> na Primary Assembly 1537 na GD_P387_contig122.1 unplaced-scaffold na na JAQPSC010000122.1 <> na Primary Assembly 1183 na GD_P387_contig123.1 unplaced-scaffold na na JAQPSC010000123.1 <> na Primary Assembly 1169 na GD_P387_contig124.1 unplaced-scaffold na na JAQPSC010000124.1 <> na Primary Assembly 1167 na