# Assembly name: mCynVol1.pri # Organism name: Cynocephalus volans (Philippine flying lemur) # Isolate: mCynVol1 # Sex: male # Taxid: 110931 # BioSample: SAMN32206947 # BioProject: PRJNA911844 # Submitter: Vertebrate Genomes Project # Date: 2022-12-28 # Assembly type: haploid (principal pseudohaplotype of diploid) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JAPWCP01 # Assembly method: HiFiasm v. 0.16.1 + galaxy2; purge_dups v. 1.2.5 + galaxy4; salsa v. 2.3 + galaxy2 # Expected final version: no # Genome coverage: 31.83x # Sequencing technology: PacBio Sequel II HiFi; Arima Hi-C v2 # RefSeq category: Representative Genome # GenBank assembly accession: GCA_027409185.1 # RefSeq assembly accession: GCF_027409185.1 # RefSeq assembly and GenBank assemblies identical: no # Linked assembly: GCA_027409165.1 (alternate pseudohaplotype of diploid) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_027409275.1 GCF_027409275.1 Primary Assembly ## GCA_027409285.1 non-nuclear # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name SUPER_1 assembled-molecule 1 Chromosome CM050027.1 = NC_084460.1 Primary Assembly 304471933 na SUPER_2 assembled-molecule 2 Chromosome CM050028.1 = NC_084461.1 Primary Assembly 234982751 na SUPER_3 assembled-molecule 3 Chromosome CM050029.1 = NC_084462.1 Primary Assembly 187144869 na SUPER_4 assembled-molecule 4 Chromosome CM050030.1 = NC_084463.1 Primary Assembly 169057324 na SUPER_5 assembled-molecule 5 Chromosome CM050031.1 = NC_084464.1 Primary Assembly 167399654 na SUPER_6 assembled-molecule 6 Chromosome CM050032.1 = NC_084465.1 Primary Assembly 165781880 na SUPER_7 assembled-molecule 7 Chromosome CM050033.1 = NC_084466.1 Primary Assembly 165290415 na SUPER_8 assembled-molecule 8 Chromosome CM050034.1 = NC_084467.1 Primary Assembly 160786829 na SUPER_9 assembled-molecule 9 Chromosome CM050035.1 = NC_084468.1 Primary Assembly 152846236 na SUPER_10 assembled-molecule 10 Chromosome CM050036.1 = NC_084469.1 Primary Assembly 133356689 na SUPER_11 assembled-molecule 11 Chromosome CM050037.1 = NC_084470.1 Primary Assembly 132767723 na SUPER_12 assembled-molecule 12 Chromosome CM050038.1 = NC_084471.1 Primary Assembly 111868234 na SUPER_13 assembled-molecule 13 Chromosome CM050039.1 = NC_084472.1 Primary Assembly 111317787 na SUPER_14 assembled-molecule 14 Chromosome CM050040.1 = NC_084473.1 Primary Assembly 102764336 na SUPER_15 assembled-molecule 15 Chromosome CM050041.1 = NC_084474.1 Primary Assembly 98152566 na SUPER_16 assembled-molecule 16 Chromosome CM050042.1 = NC_084475.1 Primary Assembly 74386810 na SUPER_17 assembled-molecule 17 Chromosome CM050043.1 = NC_084476.1 Primary Assembly 52708075 na SUPER_18 assembled-molecule 18 Chromosome CM050044.1 = NC_084477.1 Primary Assembly 19827900 na SUPER_X assembled-molecule X Chromosome CM050045.1 = NC_084478.1 Primary Assembly 181063215 na SUPER_Y assembled-molecule Y Chromosome CM050046.1 = NC_084479.1 Primary Assembly 9723162 na SUPER_4_unloc_1 unlocalized-scaffold 4 Chromosome JAPWCP010000008.1 = NW_026902364.1 Primary Assembly 1349179 na SUPER_4_unloc_2 unlocalized-scaffold 4 Chromosome JAPWCP010000009.1 = NW_026902365.1 Primary Assembly 1114427 na SUPER_4_unloc_3 unlocalized-scaffold 4 Chromosome JAPWCP010000010.1 = NW_026902366.1 Primary Assembly 1021567 na SUPER_4_unloc_4 unlocalized-scaffold 4 Chromosome JAPWCP010000011.1 = NW_026902367.1 Primary Assembly 660550 na SUPER_4_unloc_5 unlocalized-scaffold 4 Chromosome JAPWCP010000012.1 = NW_026902368.1 Primary Assembly 606552 na SUPER_8_unloc_1 unlocalized-scaffold 8 Chromosome JAPWCP010000017.1 = NW_026902369.1 Primary Assembly 743237 na SUPER_9_unloc_1 unlocalized-scaffold 9 Chromosome JAPWCP010000019.1 = NW_026902370.1 Primary Assembly 1472812 na SUPER_9_unloc_2 unlocalized-scaffold 9 Chromosome JAPWCP010000020.1 = NW_026902371.1 Primary Assembly 1401859 na SUPER_14_unloc_1 unlocalized-scaffold 14 Chromosome JAPWCP010000026.1 = NW_026902372.1 Primary Assembly 1472696 na SUPER_14_unloc_2 unlocalized-scaffold 14 Chromosome JAPWCP010000027.1 = NW_026902373.1 Primary Assembly 1421541 na SUPER_14_unloc_3 unlocalized-scaffold 14 Chromosome JAPWCP010000028.1 = NW_026902374.1 Primary Assembly 880405 na scaffold_35 unplaced-scaffold na na JAPWCP010000033.1 = NW_026902463.1 Primary Assembly 7939832 na scaffold_148 unplaced-scaffold na na JAPWCP010000034.1 = NW_026902406.1 Primary Assembly 530596 na scaffold_149 unplaced-scaffold na na JAPWCP010000035.1 = NW_026902407.1 Primary Assembly 529204 na scaffold_114 unplaced-scaffold na na JAPWCP010000036.1 = NW_026902383.1 Primary Assembly 889880 na scaffold_122 unplaced-scaffold na na JAPWCP010000037.1 = NW_026902388.1 Primary Assembly 744413 na scaffold_125 unplaced-scaffold na na JAPWCP010000038.1 = NW_026902390.1 Primary Assembly 708870 na scaffold_164 unplaced-scaffold na na JAPWCP010000039.1 = NW_026902418.1 Primary Assembly 444436 na scaffold_126 unplaced-scaffold na na JAPWCP010000040.1 = NW_026902391.1 Primary Assembly 701223 na scaffold_130 unplaced-scaffold na na JAPWCP010000041.1 = NW_026902395.1 Primary Assembly 677052 na scaffold_175 unplaced-scaffold na na JAPWCP010000042.1 = NW_026902427.1 Primary Assembly 368687 na scaffold_176 unplaced-scaffold na na JAPWCP010000043.1 = NW_026902428.1 Primary Assembly 350476 na scaffold_177 unplaced-scaffold na na JAPWCP010000044.1 = NW_026902429.1 Primary Assembly 347568 na scaffold_178 unplaced-scaffold na na JAPWCP010000045.1 = NW_026902430.1 Primary Assembly 346506 na scaffold_151 unplaced-scaffold na na JAPWCP010000046.1 = NW_026902409.1 Primary Assembly 518956 na scaffold_171 unplaced-scaffold na na JAPWCP010000047.1 = NW_026902425.1 Primary Assembly 395742 na scaffold_166 unplaced-scaffold na na JAPWCP010000048.1 = NW_026902420.1 Primary Assembly 429775 na scaffold_167 unplaced-scaffold na na JAPWCP010000049.1 = NW_026902421.1 Primary Assembly 426966 na scaffold_182 unplaced-scaffold na na JAPWCP010000050.1 = NW_026902434.1 Primary Assembly 324578 na scaffold_190 unplaced-scaffold na na JAPWCP010000051.1 = NW_026902440.1 Primary Assembly 282973 na scaffold_191 unplaced-scaffold na na JAPWCP010000052.1 = NW_026902441.1 Primary Assembly 282661 na scaffold_183 unplaced-scaffold na na JAPWCP010000053.1 = NW_026902435.1 Primary Assembly 323978 na scaffold_195 unplaced-scaffold na na JAPWCP010000054.1 = NW_026902445.1 Primary Assembly 214871 na scaffold_196 unplaced-scaffold na na JAPWCP010000055.1 = NW_026902446.1 Primary Assembly 213163 na scaffold_197 unplaced-scaffold na na JAPWCP010000056.1 = NW_026902447.1 Primary Assembly 206837 na scaffold_198 unplaced-scaffold na na JAPWCP010000057.1 = NW_026902448.1 Primary Assembly 203470 na scaffold_200 unplaced-scaffold na na JAPWCP010000058.1 = NW_026902450.1 Primary Assembly 192765 na scaffold_201 unplaced-scaffold na na JAPWCP010000059.1 = NW_026902451.1 Primary Assembly 188198 na scaffold_204 unplaced-scaffold na na JAPWCP010000060.1 = NW_026902454.1 Primary Assembly 177508 na scaffold_209 unplaced-scaffold na na JAPWCP010000061.1 = NW_026902459.1 Primary Assembly 111222 na scaffold_205 unplaced-scaffold na na JAPWCP010000062.1 = NW_026902455.1 Primary Assembly 176825 na scaffold_193 unplaced-scaffold na na JAPWCP010000063.1 = NW_026902443.1 Primary Assembly 259711 na scaffold_186 unplaced-scaffold na na JAPWCP010000064.1 = NW_026902437.1 Primary Assembly 310557 na scaffold_180 unplaced-scaffold na na JAPWCP010000065.1 = NW_026902432.1 Primary Assembly 342234 na scaffold_168 unplaced-scaffold na na JAPWCP010000066.1 = NW_026902422.1 Primary Assembly 422319 na scaffold_139 unplaced-scaffold na na JAPWCP010000067.1 = NW_026902399.1 Primary Assembly 606391 na scaffold_156 unplaced-scaffold na na JAPWCP010000068.1 = NW_026902412.1 Primary Assembly 500233 na scaffold_157 unplaced-scaffold na na JAPWCP010000069.1 = NW_026902413.1 Primary Assembly 473696 na scaffold_199 unplaced-scaffold na na JAPWCP010000070.1 = NW_026902449.1 Primary Assembly 199236 na scaffold_189 unplaced-scaffold na na JAPWCP010000071.1 = NW_026902439.1 Primary Assembly 284549 na scaffold_63 unplaced-scaffold na na JAPWCP010000072.1 = NW_026902465.1 Primary Assembly 2557252 na scaffold_68 unplaced-scaffold na na JAPWCP010000073.1 = NW_026902466.1 Primary Assembly 2138624 na scaffold_71 unplaced-scaffold na na JAPWCP010000074.1 = NW_026902467.1 Primary Assembly 1844547 na scaffold_3_1 unplaced-scaffold na na JAPWCP010000075.1 = NW_026902464.1 Primary Assembly 611274 na scaffold_72 unplaced-scaffold na na JAPWCP010000076.1 = NW_026902468.1 Primary Assembly 1818186 na scaffold_108 unplaced-scaffold na na JAPWCP010000077.1 = NW_026902378.1 Primary Assembly 1002862 na scaffold_75 unplaced-scaffold na na JAPWCP010000078.1 = NW_026902469.1 Primary Assembly 1743654 na scaffold_80 unplaced-scaffold na na JAPWCP010000079.1 = NW_026902470.1 Primary Assembly 1651122 na scaffold_82 unplaced-scaffold na na JAPWCP010000080.1 = NW_026902471.1 Primary Assembly 1614064 na scaffold_92 unplaced-scaffold na na JAPWCP010000081.1 = NW_026902472.1 Primary Assembly 1276203 na scaffold_97 unplaced-scaffold na na JAPWCP010000082.1 = NW_026902473.1 Primary Assembly 1212764 na scaffold_101 unplaced-scaffold na na JAPWCP010000083.1 = NW_026902375.1 Primary Assembly 1125437 na scaffold_103 unplaced-scaffold na na JAPWCP010000084.1 = NW_026902376.1 Primary Assembly 1090092 na scaffold_104 unplaced-scaffold na na JAPWCP010000085.1 = NW_026902377.1 Primary Assembly 1075299 na scaffold_109 unplaced-scaffold na na JAPWCP010000086.1 = NW_026902379.1 Primary Assembly 995266 na scaffold_111 unplaced-scaffold na na JAPWCP010000087.1 = NW_026902380.1 Primary Assembly 960081 na scaffold_112 unplaced-scaffold na na JAPWCP010000088.1 = NW_026902381.1 Primary Assembly 946807 na scaffold_113 unplaced-scaffold na na JAPWCP010000089.1 = NW_026902382.1 Primary Assembly 928139 na scaffold_115 unplaced-scaffold na na JAPWCP010000090.1 = NW_026902384.1 Primary Assembly 881834 na scaffold_117 unplaced-scaffold na na JAPWCP010000091.1 = NW_026902385.1 Primary Assembly 831573 na scaffold_119 unplaced-scaffold na na JAPWCP010000092.1 = NW_026902386.1 Primary Assembly 825622 na scaffold_121 unplaced-scaffold na na JAPWCP010000093.1 = NW_026902387.1 Primary Assembly 791383 na scaffold_124 unplaced-scaffold na na JAPWCP010000094.1 = NW_026902389.1 Primary Assembly 736054 na scaffold_127 unplaced-scaffold na na JAPWCP010000095.1 = NW_026902392.1 Primary Assembly 694697 na scaffold_128 unplaced-scaffold na na JAPWCP010000096.1 = NW_026902393.1 Primary Assembly 688838 na scaffold_129 unplaced-scaffold na na JAPWCP010000097.1 = NW_026902394.1 Primary Assembly 688295 na scaffold_131 unplaced-scaffold na na JAPWCP010000098.1 = NW_026902396.1 Primary Assembly 674379 na scaffold_132 unplaced-scaffold na na JAPWCP010000099.1 = NW_026902397.1 Primary Assembly 674177 na scaffold_135 unplaced-scaffold na na JAPWCP010000100.1 = NW_026902398.1 Primary Assembly 636648 na scaffold_140 unplaced-scaffold na na JAPWCP010000101.1 = NW_026902400.1 Primary Assembly 599963 na scaffold_142 unplaced-scaffold na na JAPWCP010000102.1 = NW_026902401.1 Primary Assembly 575124 na scaffold_143 unplaced-scaffold na na JAPWCP010000103.1 = NW_026902402.1 Primary Assembly 563402 na scaffold_144 unplaced-scaffold na na JAPWCP010000104.1 = NW_026902403.1 Primary Assembly 557872 na scaffold_145 unplaced-scaffold na na JAPWCP010000105.1 = NW_026902404.1 Primary Assembly 556191 na scaffold_146 unplaced-scaffold na na JAPWCP010000106.1 = NW_026902405.1 Primary Assembly 552437 na scaffold_150 unplaced-scaffold na na JAPWCP010000107.1 = NW_026902408.1 Primary Assembly 525208 na scaffold_153 unplaced-scaffold na na JAPWCP010000108.1 = NW_026902410.1 Primary Assembly 510696 na scaffold_154 unplaced-scaffold na na JAPWCP010000109.1 = NW_026902411.1 Primary Assembly 509152 na scaffold_158 unplaced-scaffold na na JAPWCP010000110.1 = NW_026902414.1 Primary Assembly 465039 na scaffold_159 unplaced-scaffold na na JAPWCP010000111.1 = NW_026902415.1 Primary Assembly 464580 na scaffold_160 unplaced-scaffold na na JAPWCP010000112.1 = NW_026902416.1 Primary Assembly 454428 na scaffold_161 unplaced-scaffold na na JAPWCP010000113.1 = NW_026902417.1 Primary Assembly 451796 na scaffold_165 unplaced-scaffold na na JAPWCP010000114.1 = NW_026902419.1 Primary Assembly 435505 na scaffold_169 unplaced-scaffold na na JAPWCP010000115.1 = NW_026902423.1 Primary Assembly 412686 na scaffold_170 unplaced-scaffold na na JAPWCP010000116.1 = NW_026902424.1 Primary Assembly 402588 na scaffold_173 unplaced-scaffold na na JAPWCP010000117.1 = NW_026902426.1 Primary Assembly 371526 na scaffold_179 unplaced-scaffold na na JAPWCP010000118.1 = NW_026902431.1 Primary Assembly 345435 na scaffold_181 unplaced-scaffold na na JAPWCP010000119.1 = NW_026902433.1 Primary Assembly 335979 na scaffold_185 unplaced-scaffold na na JAPWCP010000120.1 = NW_026902436.1 Primary Assembly 317755 na scaffold_188 unplaced-scaffold na na JAPWCP010000121.1 = NW_026902438.1 Primary Assembly 300078 na scaffold_192 unplaced-scaffold na na JAPWCP010000122.1 = NW_026902442.1 Primary Assembly 269062 na scaffold_194 unplaced-scaffold na na JAPWCP010000123.1 = NW_026902444.1 Primary Assembly 215735 na scaffold_202 unplaced-scaffold na na JAPWCP010000124.1 = NW_026902452.1 Primary Assembly 185991 na scaffold_203 unplaced-scaffold na na JAPWCP010000125.1 = NW_026902453.1 Primary Assembly 182377 na scaffold_206 unplaced-scaffold na na JAPWCP010000126.1 = NW_026902456.1 Primary Assembly 154781 na scaffold_207 unplaced-scaffold na na JAPWCP010000127.1 = NW_026902457.1 Primary Assembly 135058 na scaffold_208 unplaced-scaffold na na JAPWCP010000128.1 = NW_026902458.1 Primary Assembly 111530 na scaffold_210 unplaced-scaffold na na JAPWCP010000129.1 = NW_026902460.1 Primary Assembly 110724 na scaffold_211 unplaced-scaffold na na JAPWCP010000130.1 = NW_026902461.1 Primary Assembly 106670 na scaffold_212 unplaced-scaffold na na JAPWCP010000131.1 = NW_026902462.1 Primary Assembly 32209 na ptg000036l_rotated assembled-molecule MT Mitochondrion CM050047.1 <> na non-nuclear 16714 na