# Assembly name: ASM2521551v1 # Organism name: Schistosoma japonicum (flatworms) # Infraspecific name: strain=F4M4 # Taxid: 6182 # BioSample: SAMN18858510 # BioProject: PRJNA724792 # Submitter: Tongji University School of Medicine # Date: 2022-09-16 # Assembly type: haploid # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JAGWFQ01 # Assembly method: FALCON v. 3 # Expected final version: yes # Genome coverage: 80.0x # Sequencing technology: PacBio # RefSeq category: Reference Genome # GenBank assembly accession: GCA_025215515.1 # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_025215555.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name Chr1 assembled-molecule 1 Chromosome CM046061.1 <> na Primary Assembly 89894451 na Chr2 assembled-molecule 2 Chromosome CM046062.1 <> na Primary Assembly 46258093 na Chr3 assembled-molecule 3 Chromosome CM046063.1 <> na Primary Assembly 49539924 na Chr4 assembled-molecule 4 Chromosome CM046064.1 <> na Primary Assembly 48683546 na Chr5 assembled-molecule 5 Chromosome CM046065.1 <> na Primary Assembly 24058275 na Chr6 assembled-molecule 6 Chromosome CM046066.1 <> na Primary Assembly 28227522 na Chr7 assembled-molecule 7 Chromosome CM046067.1 <> na Primary Assembly 22279425 na ChrW assembled-molecule W Chromosome CM046068.1 <> na Primary Assembly 4811502 na ChrZ assembled-molecule Z Chromosome CM046069.1 <> na Primary Assembly 86968200 na FRAGSCAFF_149 unplaced-scaffold na na JAGWFQ010000010.1 <> na Primary Assembly 48075 na FRAGSCAFF_81 unplaced-scaffold na na JAGWFQ010000011.1 <> na Primary Assembly 94990 na ORIGINAL_172 unplaced-scaffold na na JAGWFQ010000012.1 <> na Primary Assembly 20550 na ORIGINAL_179 unplaced-scaffold na na JAGWFQ010000013.1 <> na Primary Assembly 1658 na ORIGINAL_219 unplaced-scaffold na na JAGWFQ010000014.1 <> na Primary Assembly 13893 na FRAGSCAFF_104 unplaced-scaffold na na JAGWFQ010000015.1 <> na Primary Assembly 77913 na FRAGSCAFF_105 unplaced-scaffold na na JAGWFQ010000016.1 <> na Primary Assembly 232672 na ORIGINAL_276 unplaced-scaffold na na JAGWFQ010000017.1 <> na Primary Assembly 9977 na ORIGINAL_277 unplaced-scaffold na na JAGWFQ010000018.1 <> na Primary Assembly 15930 na FRAGSCAFF_120 unplaced-scaffold na na JAGWFQ010000019.1 <> na Primary Assembly 187965 na ORIGINAL_423 unplaced-scaffold na na JAGWFQ010000020.1 <> na Primary Assembly 261789 na ORIGINAL_749 unplaced-scaffold na na JAGWFQ010000021.1 <> na Primary Assembly 46261 na ORIGINAL_267 unplaced-scaffold na na JAGWFQ010000022.1 <> na Primary Assembly 124271 na FRAGSCAFF_125 unplaced-scaffold na na JAGWFQ010000023.1 <> na Primary Assembly 75554 na FRAGSCAFF_129 unplaced-scaffold na na JAGWFQ010000024.1 <> na Primary Assembly 156301 na FRAGSCAFF_140 unplaced-scaffold na na JAGWFQ010000025.1 <> na Primary Assembly 197365 na FRAGSCAFF_147 unplaced-scaffold na na JAGWFQ010000026.1 <> na Primary Assembly 186515 na FRAGSCAFF_152 unplaced-scaffold na na JAGWFQ010000027.1 <> na Primary Assembly 174033 na FRAGSCAFF_161 unplaced-scaffold na na JAGWFQ010000028.1 <> na Primary Assembly 147743 na FRAGSCAFF_164 unplaced-scaffold na na JAGWFQ010000029.1 <> na Primary Assembly 333364 na ORIGINAL_434 unplaced-scaffold na na JAGWFQ010000030.1 <> na Primary Assembly 96647 na ORIGINAL_435 unplaced-scaffold na na JAGWFQ010000031.1 <> na Primary Assembly 76241 na ORIGINAL_443 unplaced-scaffold na na JAGWFQ010000032.1 <> na Primary Assembly 18891 na ORIGINAL_451 unplaced-scaffold na na JAGWFQ010000033.1 <> na Primary Assembly 59491 na ORIGINAL_463 unplaced-scaffold na na JAGWFQ010000034.1 <> na Primary Assembly 3139 na ORIGINAL_464 unplaced-scaffold na na JAGWFQ010000035.1 <> na Primary Assembly 86673 na ORIGINAL_467 unplaced-scaffold na na JAGWFQ010000036.1 <> na Primary Assembly 82544 na ORIGINAL_476 unplaced-scaffold na na JAGWFQ010000037.1 <> na Primary Assembly 111486 na ORIGINAL_483 unplaced-scaffold na na JAGWFQ010000038.1 <> na Primary Assembly 9241 na ORIGINAL_488 unplaced-scaffold na na JAGWFQ010000039.1 <> na Primary Assembly 90321 na ORIGINAL_492 unplaced-scaffold na na JAGWFQ010000040.1 <> na Primary Assembly 339 na ORIGINAL_496 unplaced-scaffold na na JAGWFQ010000041.1 <> na Primary Assembly 130003 na ORIGINAL_501 unplaced-scaffold na na JAGWFQ010000042.1 <> na Primary Assembly 1937 na ORIGINAL_516 unplaced-scaffold na na JAGWFQ010000043.1 <> na Primary Assembly 25086 na ORIGINAL_520 unplaced-scaffold na na JAGWFQ010000044.1 <> na Primary Assembly 55298 na ORIGINAL_529 unplaced-scaffold na na JAGWFQ010000045.1 <> na Primary Assembly 21679 na ORIGINAL_532 unplaced-scaffold na na JAGWFQ010000046.1 <> na Primary Assembly 27895 na ORIGINAL_538 unplaced-scaffold na na JAGWFQ010000047.1 <> na Primary Assembly 131478 na ORIGINAL_541 unplaced-scaffold na na JAGWFQ010000048.1 <> na Primary Assembly 17367 na ORIGINAL_567 unplaced-scaffold na na JAGWFQ010000049.1 <> na Primary Assembly 2683 na ORIGINAL_588 unplaced-scaffold na na JAGWFQ010000050.1 <> na Primary Assembly 38118 na ORIGINAL_596 unplaced-scaffold na na JAGWFQ010000051.1 <> na Primary Assembly 8633 na ORIGINAL_626 unplaced-scaffold na na JAGWFQ010000052.1 <> na Primary Assembly 50305 na ORIGINAL_636 unplaced-scaffold na na JAGWFQ010000053.1 <> na Primary Assembly 48803 na ORIGINAL_671 unplaced-scaffold na na JAGWFQ010000054.1 <> na Primary Assembly 45938 na FRAGSCAFF_40 unplaced-scaffold na na JAGWFQ010000055.1 <> na Primary Assembly 231621 na ORIGINAL_236_2 unplaced-scaffold na na JAGWFQ010000056.1 <> na Primary Assembly 125000 na ORIGINAL_559 unplaced-scaffold na na JAGWFQ010000057.1 <> na Primary Assembly 237154 na ORIGINAL_410 unplaced-scaffold na na JAGWFQ010000058.1 <> na Primary Assembly 49649 na ORIGINAL_417 unplaced-scaffold na na JAGWFQ010000059.1 <> na Primary Assembly 2930 na ORIGINAL_422 unplaced-scaffold na na JAGWFQ010000060.1 <> na Primary Assembly 62275 na FRAGSCAFF_82 unplaced-scaffold na na JAGWFQ010000061.1 <> na Primary Assembly 56380 na ORIGINAL_187 unplaced-scaffold na na JAGWFQ010000062.1 <> na Primary Assembly 26712 na ORIGINAL_190 unplaced-scaffold na na JAGWFQ010000063.1 <> na Primary Assembly 57239 na ORIGINAL_202 unplaced-scaffold na na JAGWFQ010000064.1 <> na Primary Assembly 80476 na ORIGINAL_206 unplaced-scaffold na na JAGWFQ010000065.1 <> na Primary Assembly 55799 na ORIGINAL_208 unplaced-scaffold na na JAGWFQ010000066.1 <> na Primary Assembly 15414 na ORIGINAL_213 unplaced-scaffold na na JAGWFQ010000067.1 <> na Primary Assembly 18203 na ORIGINAL_244 unplaced-scaffold na na JAGWFQ010000068.1 <> na Primary Assembly 18077 na ORIGINAL_257 unplaced-scaffold na na JAGWFQ010000069.1 <> na Primary Assembly 25113 na ORIGINAL_290 unplaced-scaffold na na JAGWFQ010000070.1 <> na Primary Assembly 207909 na ORIGINAL_293 unplaced-scaffold na na JAGWFQ010000071.1 <> na Primary Assembly 367 na ORIGINAL_295 unplaced-scaffold na na JAGWFQ010000072.1 <> na Primary Assembly 932 na ORIGINAL_298 unplaced-scaffold na na JAGWFQ010000073.1 <> na Primary Assembly 117339 na ORIGINAL_339 unplaced-scaffold na na JAGWFQ010000074.1 <> na Primary Assembly 53272 na ORIGINAL_346 unplaced-scaffold na na JAGWFQ010000075.1 <> na Primary Assembly 23394 na ORIGINAL_354 unplaced-scaffold na na JAGWFQ010000076.1 <> na Primary Assembly 4007 na ORIGINAL_358 unplaced-scaffold na na JAGWFQ010000077.1 <> na Primary Assembly 48013 na ORIGINAL_359 unplaced-scaffold na na JAGWFQ010000078.1 <> na Primary Assembly 9682 na ORIGINAL_360 unplaced-scaffold na na JAGWFQ010000079.1 <> na Primary Assembly 66042 na ORIGINAL_370 unplaced-scaffold na na JAGWFQ010000080.1 <> na Primary Assembly 1538 na ORIGINAL_376 unplaced-scaffold na na JAGWFQ010000081.1 <> na Primary Assembly 14830 na ORIGINAL_380 unplaced-scaffold na na JAGWFQ010000082.1 <> na Primary Assembly 17199 na ORIGINAL_382 unplaced-scaffold na na JAGWFQ010000083.1 <> na Primary Assembly 296 na ORIGINAL_397 unplaced-scaffold na na JAGWFQ010000084.1 <> na Primary Assembly 18094 na ORIGINAL_398 unplaced-scaffold na na JAGWFQ010000085.1 <> na Primary Assembly 3687 na ORIGINAL_425 unplaced-scaffold na na JAGWFQ010000086.1 <> na Primary Assembly 52562 na ORIGINAL_677 unplaced-scaffold na na JAGWFQ010000087.1 <> na Primary Assembly 20616 na ORIGINAL_680 unplaced-scaffold na na JAGWFQ010000088.1 <> na Primary Assembly 58792 na ORIGINAL_651 unplaced-scaffold na na JAGWFQ010000089.1 <> na Primary Assembly 58939 na ORIGINAL_655 unplaced-scaffold na na JAGWFQ010000090.1 <> na Primary Assembly 23407 na ORIGINAL_662 unplaced-scaffold na na JAGWFQ010000091.1 <> na Primary Assembly 26667 na ORIGINAL_754 unplaced-scaffold na na JAGWFQ010000092.1 <> na Primary Assembly 64814 na ORIGINAL_763 unplaced-scaffold na na JAGWFQ010000093.1 <> na Primary Assembly 1244 na FRAGSCAFF_160_2 unplaced-scaffold na na JAGWFQ010000094.1 <> na Primary Assembly 5000 na FRAGSCAFF_96_4 unplaced-scaffold na na JAGWFQ010000095.1 <> na Primary Assembly 50000 na FRAGSCAFF_96_6 unplaced-scaffold na na JAGWFQ010000096.1 <> na Primary Assembly 25000 na FRAGSCAFF_96_2 unplaced-scaffold na na JAGWFQ010000097.1 <> na Primary Assembly 22617 na FRAGSCAFF_128_2 unplaced-scaffold na na JAGWFQ010000098.1 <> na Primary Assembly 50000 na FRAGSCAFF_18_2 unplaced-scaffold na na JAGWFQ010000099.1 <> na Primary Assembly 50000 na FRAGSCAFF_118_2 unplaced-scaffold na na JAGWFQ010000100.1 <> na Primary Assembly 50000 na