# Assembly name: CGAR_Hap2 # Organism name: Clarias gariepinus (North African catfish) # Infraspecific name: ecotype=Netherlands # Isolate: MV-2021 # Sex: male # Taxid: 13013 # BioSample: SAMN27021044 # BioProject: PRJNA820764 # Submitter: Leibniz Institute for Farm Animal Biology (FBN) # Date: 2022-07-13 # Assembly type: alternate-pseudohaplotype # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JAMBPA01 # Assembly method: hifiasm v. 0.16.1 # Expected final version: yes # Reference guided assembly: GCA_024214125 # Genome coverage: 100x # Sequencing technology: PacBio Sequel # GenBank assembly accession: GCA_024256465.1 # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_024256475.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name Chr1 assembled-molecule 1 Chromosome CM044260.1 <> na Primary Assembly 48930159 na Chr2 assembled-molecule 2 Chromosome CM044261.1 <> na Primary Assembly 50467679 na Chr3 assembled-molecule 3 Chromosome CM044262.1 <> na Primary Assembly 45324063 na Chr4 assembled-molecule 4 Chromosome CM044263.1 <> na Primary Assembly 43682122 na Chr5 assembled-molecule 5 Chromosome CM044264.1 <> na Primary Assembly 40518827 na Chr6 assembled-molecule 6 Chromosome CM044265.1 <> na Primary Assembly 41624438 na Chr7 assembled-molecule 7 Chromosome CM044266.1 <> na Primary Assembly 36884354 na Chr8 assembled-molecule 8 Chromosome CM044267.1 <> na Primary Assembly 40279494 na Chr9 assembled-molecule 9 Chromosome CM044268.1 <> na Primary Assembly 37805770 na Chr10 assembled-molecule 10 Chromosome CM044269.1 <> na Primary Assembly 35991448 na Chr11 assembled-molecule 11 Chromosome CM044270.1 <> na Primary Assembly 33182915 na Chr12 assembled-molecule 12 Chromosome CM044271.1 <> na Primary Assembly 24920411 na Chr13 assembled-molecule 13 Chromosome CM044272.1 <> na Primary Assembly 33187444 na Chr14 assembled-molecule 14 Chromosome CM044273.1 <> na Primary Assembly 31492657 na Chr15 assembled-molecule 15 Chromosome CM044274.1 <> na Primary Assembly 32189746 na Chr16 assembled-molecule 16 Chromosome CM044275.1 <> na Primary Assembly 33271416 na Chr17 assembled-molecule 17 Chromosome CM044276.1 <> na Primary Assembly 29196073 na Chr18 assembled-molecule 18 Chromosome CM044277.1 <> na Primary Assembly 31259998 na Chr19 assembled-molecule 19 Chromosome CM044278.1 <> na Primary Assembly 30471520 na Chr20 assembled-molecule 20 Chromosome CM044279.1 <> na Primary Assembly 24914970 na Chr21 assembled-molecule 21 Chromosome CM044280.1 <> na Primary Assembly 29978869 na Chr22 assembled-molecule 22 Chromosome CM044281.1 <> na Primary Assembly 29209753 na Chr23 assembled-molecule 23 Chromosome CM044282.1 <> na Primary Assembly 25739244 na Chr24 assembled-molecule 24 Chromosome CM044283.1 <> na Primary Assembly 26276903 na Chr25 assembled-molecule 25 Chromosome CM044284.1 <> na Primary Assembly 25596994 na Chr26 assembled-molecule 26 Chromosome CM044285.1 <> na Primary Assembly 24902299 na Chr27 assembled-molecule 27 Chromosome CM044286.1 <> na Primary Assembly 21945534 na Chr28 assembled-molecule 28 Chromosome CM044287.1 <> na Primary Assembly 19875123 na Unplaced1 unplaced-scaffold na na JAMBPA010000029.1 <> na Primary Assembly 538621 na Unplaced2 unplaced-scaffold na na JAMBPA010000030.1 <> na Primary Assembly 474079 na Unplaced3 unplaced-scaffold na na JAMBPA010000031.1 <> na Primary Assembly 464457 na Unplaced4 unplaced-scaffold na na JAMBPA010000032.1 <> na Primary Assembly 454680 na Unplaced5 unplaced-scaffold na na JAMBPA010000033.1 <> na Primary Assembly 452485 na Unplaced6 unplaced-scaffold na na JAMBPA010000034.1 <> na Primary Assembly 411550 na Unplaced7 unplaced-scaffold na na JAMBPA010000035.1 <> na Primary Assembly 382534 na Unplaced8 unplaced-scaffold na na JAMBPA010000036.1 <> na Primary Assembly 275735 na Unplaced9 unplaced-scaffold na na JAMBPA010000037.1 <> na Primary Assembly 226063 na Unplaced10 unplaced-scaffold na na JAMBPA010000038.1 <> na Primary Assembly 220891 na Unplaced11 unplaced-scaffold na na JAMBPA010000039.1 <> na Primary Assembly 210809 na Unplaced12 unplaced-scaffold na na JAMBPA010000040.1 <> na Primary Assembly 167567 na Unplaced13 unplaced-scaffold na na JAMBPA010000041.1 <> na Primary Assembly 165563 na Unplaced14 unplaced-scaffold na na JAMBPA010000042.1 <> na Primary Assembly 161882 na Unplaced15 unplaced-scaffold na na JAMBPA010000043.1 <> na Primary Assembly 120596 na Unplaced16 unplaced-scaffold na na JAMBPA010000044.1 <> na Primary Assembly 103980 na Unplaced17 unplaced-scaffold na na JAMBPA010000045.1 <> na Primary Assembly 95088 na Unplaced19 unplaced-scaffold na na JAMBPA010000046.1 <> na Primary Assembly 92734 na Unplaced20 unplaced-scaffold na na JAMBPA010000047.1 <> na Primary Assembly 88280 na Unplaced21 unplaced-scaffold na na JAMBPA010000048.1 <> na Primary Assembly 86340 na Unplaced22 unplaced-scaffold na na JAMBPA010000049.1 <> na Primary Assembly 81425 na Unplaced23 unplaced-scaffold na na JAMBPA010000050.1 <> na Primary Assembly 80361 na Unplaced24 unplaced-scaffold na na JAMBPA010000051.1 <> na Primary Assembly 78250 na Unplaced25 unplaced-scaffold na na JAMBPA010000052.1 <> na Primary Assembly 74777 na Unplaced26 unplaced-scaffold na na JAMBPA010000053.1 <> na Primary Assembly 73963 na Unplaced27 unplaced-scaffold na na JAMBPA010000054.1 <> na Primary Assembly 71466 na Unplaced28 unplaced-scaffold na na JAMBPA010000055.1 <> na Primary Assembly 65836 na Unplaced29 unplaced-scaffold na na JAMBPA010000056.1 <> na Primary Assembly 63789 na Unplaced30 unplaced-scaffold na na JAMBPA010000057.1 <> na Primary Assembly 63409 na Unplaced31 unplaced-scaffold na na JAMBPA010000058.1 <> na Primary Assembly 60407 na Unplaced32 unplaced-scaffold na na JAMBPA010000059.1 <> na Primary Assembly 55731 na Unplaced33 unplaced-scaffold na na JAMBPA010000060.1 <> na Primary Assembly 49896 na Unplaced34 unplaced-scaffold na na JAMBPA010000061.1 <> na Primary Assembly 47973 na Unplaced35 unplaced-scaffold na na JAMBPA010000062.1 <> na Primary Assembly 47376 na Unplaced36 unplaced-scaffold na na JAMBPA010000063.1 <> na Primary Assembly 44222 na Unplaced37 unplaced-scaffold na na JAMBPA010000064.1 <> na Primary Assembly 42986 na Unplaced38 unplaced-scaffold na na JAMBPA010000065.1 <> na Primary Assembly 39617 na Unplaced39 unplaced-scaffold na na JAMBPA010000066.1 <> na Primary Assembly 37604 na Unplaced40 unplaced-scaffold na na JAMBPA010000067.1 <> na Primary Assembly 36801 na Unplaced41 unplaced-scaffold na na JAMBPA010000068.1 <> na Primary Assembly 36714 na Unplaced42 unplaced-scaffold na na JAMBPA010000069.1 <> na Primary Assembly 35728 na Unplaced43 unplaced-scaffold na na JAMBPA010000070.1 <> na Primary Assembly 34457 na Unplaced44 unplaced-scaffold na na JAMBPA010000071.1 <> na Primary Assembly 33953 na Unplaced45 unplaced-scaffold na na JAMBPA010000072.1 <> na Primary Assembly 27262 na Unplaced46 unplaced-scaffold na na JAMBPA010000073.1 <> na Primary Assembly 29137 na Unplaced47 unplaced-scaffold na na JAMBPA010000074.1 <> na Primary Assembly 28844 na Unplaced48 unplaced-scaffold na na JAMBPA010000075.1 <> na Primary Assembly 28454 na Unplaced49 unplaced-scaffold na na JAMBPA010000076.1 <> na Primary Assembly 26317 na Unplaced50 unplaced-scaffold na na JAMBPA010000077.1 <> na Primary Assembly 27588 na Unplaced51 unplaced-scaffold na na JAMBPA010000078.1 <> na Primary Assembly 26375 na Unplaced52 unplaced-scaffold na na JAMBPA010000079.1 <> na Primary Assembly 24210 na Unplaced53 unplaced-scaffold na na JAMBPA010000080.1 <> na Primary Assembly 24291 na Unplaced54 unplaced-scaffold na na JAMBPA010000081.1 <> na Primary Assembly 23173 na Unplaced55 unplaced-scaffold na na JAMBPA010000082.1 <> na Primary Assembly 21845 na Unplaced56 unplaced-scaffold na na JAMBPA010000083.1 <> na Primary Assembly 21849 na Unplaced57 unplaced-scaffold na na JAMBPA010000084.1 <> na Primary Assembly 21063 na Unplaced58 unplaced-scaffold na na JAMBPA010000085.1 <> na Primary Assembly 20910 na Unplaced59 unplaced-scaffold na na JAMBPA010000086.1 <> na Primary Assembly 20040 na Unplaced60 unplaced-scaffold na na JAMBPA010000087.1 <> na Primary Assembly 18483 na Unplaced61 unplaced-scaffold na na JAMBPA010000088.1 <> na Primary Assembly 18184 na Unplaced62 unplaced-scaffold na na JAMBPA010000089.1 <> na Primary Assembly 15102 na Unplaced63 unplaced-scaffold na na JAMBPA010000090.1 <> na Primary Assembly 4884843 na Unplaced64 unplaced-scaffold na na JAMBPA010000091.1 <> na Primary Assembly 2528743 na Unplaced65 unplaced-scaffold na na JAMBPA010000092.1 <> na Primary Assembly 2342480 na Unplaced66 unplaced-scaffold na na JAMBPA010000093.1 <> na Primary Assembly 2327013 na Unplaced67 unplaced-scaffold na na JAMBPA010000094.1 <> na Primary Assembly 1905509 na Unplaced68 unplaced-scaffold na na JAMBPA010000095.1 <> na Primary Assembly 1883043 na Unplaced69 unplaced-scaffold na na JAMBPA010000096.1 <> na Primary Assembly 1184308 na Unplaced70 unplaced-scaffold na na JAMBPA010000097.1 <> na Primary Assembly 1184043 na Unplaced71 unplaced-scaffold na na JAMBPA010000098.1 <> na Primary Assembly 10508 na