# Assembly name: CGAR_Hap1 # Organism name: Clarias gariepinus (North African catfish) # Infraspecific name: ecotype=Netherlands # Isolate: MV-2021 # Sex: male # Taxid: 13013 # BioSample: SAMN27021044 # BioProject: PRJNA820763 # Submitter: Leibniz Institute for Farm Animal Biology (FBN) # Date: 2022-07-13 # Assembly type: haploid (principal pseudohaplotype of diploid) # Release type: major # Assembly level: Chromosome # Genome representation: full # WGS project: JAMBOZ01 # Assembly method: hifiasm v. 0.16.1 # Expected final version: yes # Reference guided assembly: GCA_024214125 # Genome coverage: 100x # Sequencing technology: PacBio Sequel # GenBank assembly accession: GCA_024256435.1 # Linked assembly: GCA_024256465.1 (alternate pseudohaplotype of diploid) # ## Assembly-Units: ## GenBank Unit Accession RefSeq Unit Accession Assembly-Unit name ## GCA_024256455.1 Primary Assembly # # Ordered by chromosome/plasmid; the chromosomes/plasmids are followed by # unlocalized scaffolds. # Unplaced scaffolds are listed at the end. # RefSeq is equal or derived from GenBank object. # # Sequence-Name Sequence-Role Assigned-Molecule Assigned-Molecule-Location/Type GenBank-Accn Relationship RefSeq-Accn Assembly-Unit Sequence-Length UCSC-style-name Chr1 assembled-molecule 1 Chromosome CM044204.1 <> na Primary Assembly 50611283 na Chr2 assembled-molecule 2 Chromosome CM044205.1 <> na Primary Assembly 51775064 na Chr3 assembled-molecule 3 Chromosome CM044206.1 <> na Primary Assembly 47837555 na Chr4 assembled-molecule 4 Chromosome CM044207.1 <> na Primary Assembly 43543363 na Chr5 assembled-molecule 5 Chromosome CM044208.1 <> na Primary Assembly 40735003 na Chr6 assembled-molecule 6 Chromosome CM044209.1 <> na Primary Assembly 41573224 na Chr7 assembled-molecule 7 Chromosome CM044210.1 <> na Primary Assembly 40466064 na Chr8 assembled-molecule 8 Chromosome CM044211.1 <> na Primary Assembly 39755470 na Chr9 assembled-molecule 9 Chromosome CM044212.1 <> na Primary Assembly 38032089 na Chr10 assembled-molecule 10 Chromosome CM044213.1 <> na Primary Assembly 35581855 na Chr11 assembled-molecule 11 Chromosome CM044214.1 <> na Primary Assembly 34153891 na Chr12 assembled-molecule 12 Chromosome CM044215.1 <> na Primary Assembly 33849773 na Chr13 assembled-molecule 13 Chromosome CM044216.1 <> na Primary Assembly 34021760 na Chr14 assembled-molecule 14 Chromosome CM044217.1 <> na Primary Assembly 31657634 na Chr15 assembled-molecule 15 Chromosome CM044218.1 <> na Primary Assembly 33079837 na Chr16 assembled-molecule 16 Chromosome CM044219.1 <> na Primary Assembly 31826834 na Chr17 assembled-molecule 17 Chromosome CM044220.1 <> na Primary Assembly 30931002 na Chr18 assembled-molecule 18 Chromosome CM044221.1 <> na Primary Assembly 30693607 na Chr19 assembled-molecule 19 Chromosome CM044222.1 <> na Primary Assembly 30565877 na Chr20 assembled-molecule 20 Chromosome CM044223.1 <> na Primary Assembly 28646554 na Chr21 assembled-molecule 21 Chromosome CM044224.1 <> na Primary Assembly 29919080 na Chr22 assembled-molecule 22 Chromosome CM044225.1 <> na Primary Assembly 29569184 na Chr23 assembled-molecule 23 Chromosome CM044226.1 <> na Primary Assembly 26582792 na Chr24 assembled-molecule 24 Chromosome CM044227.1 <> na Primary Assembly 26084726 na Chr25 assembled-molecule 25 Chromosome CM044228.1 <> na Primary Assembly 26337910 na Chr26 assembled-molecule 26 Chromosome CM044229.1 <> na Primary Assembly 24809551 na Chr27 assembled-molecule 27 Chromosome CM044230.1 <> na Primary Assembly 22924562 na Chr28 assembled-molecule 28 Chromosome CM044231.1 <> na Primary Assembly 20511311 na Unplaced1 unplaced-scaffold na na JAMBOZ010000029.1 <> na Primary Assembly 800039 na Unplaced2 unplaced-scaffold na na JAMBOZ010000030.1 <> na Primary Assembly 676574 na Unplaced3 unplaced-scaffold na na JAMBOZ010000031.1 <> na Primary Assembly 661426 na Unplaced4 unplaced-scaffold na na JAMBOZ010000032.1 <> na Primary Assembly 649498 na Unplaced5 unplaced-scaffold na na JAMBOZ010000033.1 <> na Primary Assembly 495645 na Unplaced6 unplaced-scaffold na na JAMBOZ010000034.1 <> na Primary Assembly 457388 na Unplaced7 unplaced-scaffold na na JAMBOZ010000035.1 <> na Primary Assembly 438607 na Unplaced8 unplaced-scaffold na na JAMBOZ010000036.1 <> na Primary Assembly 436663 na Unplaced9 unplaced-scaffold na na JAMBOZ010000037.1 <> na Primary Assembly 386739 na Unplaced10 unplaced-scaffold na na JAMBOZ010000038.1 <> na Primary Assembly 344317 na Unplaced11 unplaced-scaffold na na JAMBOZ010000039.1 <> na Primary Assembly 286837 na Unplaced12 unplaced-scaffold na na JAMBOZ010000040.1 <> na Primary Assembly 236429 na Unplaced13 unplaced-scaffold na na JAMBOZ010000041.1 <> na Primary Assembly 192147 na Unplaced14 unplaced-scaffold na na JAMBOZ010000042.1 <> na Primary Assembly 182256 na Unplaced15 unplaced-scaffold na na JAMBOZ010000043.1 <> na Primary Assembly 175110 na Unplaced16 unplaced-scaffold na na JAMBOZ010000044.1 <> na Primary Assembly 143508 na Unplaced19 unplaced-scaffold na na JAMBOZ010000045.1 <> na Primary Assembly 130354 na Unplaced20 unplaced-scaffold na na JAMBOZ010000046.1 <> na Primary Assembly 121251 na Unplaced22 unplaced-scaffold na na JAMBOZ010000047.1 <> na Primary Assembly 105420 na Unplaced23 unplaced-scaffold na na JAMBOZ010000048.1 <> na Primary Assembly 102697 na Unplaced24 unplaced-scaffold na na JAMBOZ010000049.1 <> na Primary Assembly 97279 na Unplaced25 unplaced-scaffold na na JAMBOZ010000050.1 <> na Primary Assembly 92411 na Unplaced26 unplaced-scaffold na na JAMBOZ010000051.1 <> na Primary Assembly 85286 na Unplaced27 unplaced-scaffold na na JAMBOZ010000052.1 <> na Primary Assembly 85467 na Unplaced28 unplaced-scaffold na na JAMBOZ010000053.1 <> na Primary Assembly 81136 na Unplaced29 unplaced-scaffold na na JAMBOZ010000054.1 <> na Primary Assembly 79691 na Unplaced30 unplaced-scaffold na na JAMBOZ010000055.1 <> na Primary Assembly 77497 na Unplaced31 unplaced-scaffold na na JAMBOZ010000056.1 <> na Primary Assembly 69087 na Unplaced32 unplaced-scaffold na na JAMBOZ010000057.1 <> na Primary Assembly 67816 na Unplaced33 unplaced-scaffold na na JAMBOZ010000058.1 <> na Primary Assembly 66768 na Unplaced34 unplaced-scaffold na na JAMBOZ010000059.1 <> na Primary Assembly 62000 na Unplaced35 unplaced-scaffold na na JAMBOZ010000060.1 <> na Primary Assembly 60189 na Unplaced36 unplaced-scaffold na na JAMBOZ010000061.1 <> na Primary Assembly 57938 na Unplaced37 unplaced-scaffold na na JAMBOZ010000062.1 <> na Primary Assembly 59070 na Unplaced38 unplaced-scaffold na na JAMBOZ010000063.1 <> na Primary Assembly 58234 na Unplaced39 unplaced-scaffold na na JAMBOZ010000064.1 <> na Primary Assembly 57081 na Unplaced41 unplaced-scaffold na na JAMBOZ010000065.1 <> na Primary Assembly 54382 na Unplaced42 unplaced-scaffold na na JAMBOZ010000066.1 <> na Primary Assembly 54402 na Unplaced43 unplaced-scaffold na na JAMBOZ010000067.1 <> na Primary Assembly 53108 na Unplaced44 unplaced-scaffold na na JAMBOZ010000068.1 <> na Primary Assembly 51305 na Unplaced45 unplaced-scaffold na na JAMBOZ010000069.1 <> na Primary Assembly 51243 na Unplaced46 unplaced-scaffold na na JAMBOZ010000070.1 <> na Primary Assembly 47121 na Unplaced47 unplaced-scaffold na na JAMBOZ010000071.1 <> na Primary Assembly 46711 na Unplaced48 unplaced-scaffold na na JAMBOZ010000072.1 <> na Primary Assembly 46958 na Unplaced49 unplaced-scaffold na na JAMBOZ010000073.1 <> na Primary Assembly 43112 na Unplaced50 unplaced-scaffold na na JAMBOZ010000074.1 <> na Primary Assembly 41860 na Unplaced51 unplaced-scaffold na na JAMBOZ010000075.1 <> na Primary Assembly 43095 na Unplaced52 unplaced-scaffold na na JAMBOZ010000076.1 <> na Primary Assembly 41687 na Unplaced53 unplaced-scaffold na na JAMBOZ010000077.1 <> na Primary Assembly 41084 na Unplaced54 unplaced-scaffold na na JAMBOZ010000078.1 <> na Primary Assembly 41131 na Unplaced55 unplaced-scaffold na na JAMBOZ010000079.1 <> na Primary Assembly 38641 na Unplaced56 unplaced-scaffold na na JAMBOZ010000080.1 <> na Primary Assembly 35817 na Unplaced57 unplaced-scaffold na na JAMBOZ010000081.1 <> na Primary Assembly 33661 na Unplaced58 unplaced-scaffold na na JAMBOZ010000082.1 <> na Primary Assembly 26525 na Unplaced59 unplaced-scaffold na na JAMBOZ010000083.1 <> na Primary Assembly 31502 na Unplaced60 unplaced-scaffold na na JAMBOZ010000084.1 <> na Primary Assembly 31817 na Unplaced61 unplaced-scaffold na na JAMBOZ010000085.1 <> na Primary Assembly 31709 na Unplaced62 unplaced-scaffold na na JAMBOZ010000086.1 <> na Primary Assembly 31299 na Unplaced63 unplaced-scaffold na na JAMBOZ010000087.1 <> na Primary Assembly 31047 na Unplaced64 unplaced-scaffold na na JAMBOZ010000088.1 <> na Primary Assembly 30744 na Unplaced65 unplaced-scaffold na na JAMBOZ010000089.1 <> na Primary Assembly 29746 na Unplaced66 unplaced-scaffold na na JAMBOZ010000090.1 <> na Primary Assembly 28634 na Unplaced67 unplaced-scaffold na na JAMBOZ010000091.1 <> na Primary Assembly 28123 na Unplaced68 unplaced-scaffold na na JAMBOZ010000092.1 <> na Primary Assembly 27629 na Unplaced69 unplaced-scaffold na na JAMBOZ010000093.1 <> na Primary Assembly 26967 na Unplaced70 unplaced-scaffold na na JAMBOZ010000094.1 <> na Primary Assembly 27026 na Unplaced71 unplaced-scaffold na na JAMBOZ010000095.1 <> na Primary Assembly 25815 na Unplaced72 unplaced-scaffold na na JAMBOZ010000096.1 <> na Primary Assembly 25180 na Unplaced73 unplaced-scaffold na na JAMBOZ010000097.1 <> na Primary Assembly 21769 na Unplaced74 unplaced-scaffold na na JAMBOZ010000098.1 <> na Primary Assembly 24430 na Unplaced75 unplaced-scaffold na na JAMBOZ010000099.1 <> na Primary Assembly 23097 na Unplaced76 unplaced-scaffold na na JAMBOZ010000100.1 <> na Primary Assembly 23627 na Unplaced77 unplaced-scaffold na na JAMBOZ010000101.1 <> na Primary Assembly 22788 na Unplaced78 unplaced-scaffold na na JAMBOZ010000102.1 <> na Primary Assembly 22952 na Unplaced79 unplaced-scaffold na na JAMBOZ010000103.1 <> na Primary Assembly 22012 na Unplaced80 unplaced-scaffold na na JAMBOZ010000104.1 <> na Primary Assembly 22689 na Unplaced81 unplaced-scaffold na na JAMBOZ010000105.1 <> na Primary Assembly 21432 na Unplaced82 unplaced-scaffold na na JAMBOZ010000106.1 <> na Primary Assembly 21349 na Unplaced83 unplaced-scaffold na na JAMBOZ010000107.1 <> na Primary Assembly 20213 na Unplaced84 unplaced-scaffold na na JAMBOZ010000108.1 <> na Primary Assembly 18118 na Unplaced85 unplaced-scaffold na na JAMBOZ010000109.1 <> na Primary Assembly 17912 na Unplaced86 unplaced-scaffold na na JAMBOZ010000110.1 <> na Primary Assembly 17609 na Unplaced87 unplaced-scaffold na na JAMBOZ010000111.1 <> na Primary Assembly 17264 na Unplaced88 unplaced-scaffold na na JAMBOZ010000112.1 <> na Primary Assembly 16138 na Unplaced89 unplaced-scaffold na na JAMBOZ010000113.1 <> na Primary Assembly 15820 na Unplaced90 unplaced-scaffold na na JAMBOZ010000114.1 <> na Primary Assembly 12015 na Unplaced91 unplaced-scaffold na na JAMBOZ010000115.1 <> na Primary Assembly 10904 na Unplaced92 unplaced-scaffold na na JAMBOZ010000116.1 <> na Primary Assembly 2315134 na Unplaced93 unplaced-scaffold na na JAMBOZ010000117.1 <> na Primary Assembly 1780424 na Unplaced94 unplaced-scaffold na na JAMBOZ010000118.1 <> na Primary Assembly 1567281 na Unplaced95 unplaced-scaffold na na JAMBOZ010000119.1 <> na Primary Assembly 1150640 na