track assembly
longLabel Assembly
shortLabel Assembly
visibility pack
colorByStrand 150,100,30 230,170,40
color 150,100,30
altColor 230,170,40
bigDataUrl bbi/GCA_021951015.1_HG002.mat.cur.20211005.assembly.bb
type bigBed 6
html html/GCA_021951015.1_HG002.mat.cur.20211005.assembly
searchIndex name
searchTrix ixIxx/GCA_021951015.1_HG002.mat.cur.20211005.assembly.ix
url https://www.ncbi.nlm.nih.gov/nuccore/$$
urlLabel NCBI Nucleotide database:
group map

track cytoBandIdeo
shortLabel Chromosome Band (Ideogram)
longLabel Ideogram for Orientation
group map
visibility dense
type bigBed 4 +
bigDataUrl bbi/GCA_021951015.1_HG002.mat.cur.20211005.cytoBand.bb

track gc5Base
shortLabel GC Percent
longLabel GC Percent in 5-Base Windows
group map
visibility full
autoScale Off
maxHeightPixels 128:36:16
graphTypeDefault Bar
gridDefault OFF
windowingFunction Mean
color 0,0,0
altColor 128,128,128
viewLimits 30:70
type bigWig 0 100
bigDataUrl bbi/GCA_021951015.1_HG002.mat.cur.20211005.gc5Base.bw
html html/GCA_021951015.1_HG002.mat.cur.20211005.gc5Base

track tanDups
shortLabel Tandem Dups
longLabel Paired identical sequences
compositeTrack on
visibility hide
type bigBed 12
group map
html html/GCA_021951015.1_HG002.mat.cur.20211005.tanDups

    track tandemDups
    parent tanDups on
    shortLabel Tandem Dups
    longLabel Paired exactly identical sequence survey over entire genome assembly
    bigDataUrl bbi/GCA_021951015.1_HG002.mat.cur.20211005.tandemDups.bb
    type bigBed 12

track repeatMasker
shortLabel RepeatMasker
longLabel RepeatMasker Repetitive Elements
type bigRmsk 9 +
visibility pack
group varRep
bigDataUrl bbi/GCA_021951015.1_HG002.mat.cur.20211005.rmsk.bb
maxWindowToDraw 5000000
html html/GCA_021951015.1_HG002.mat.cur.20211005.repeatMasker

track simpleRepeat
shortLabel Simple Repeats
longLabel Simple Tandem Repeats by TRF
group varRep
visibility dense
type bigBed 4 +
bigDataUrl bbi/GCA_021951015.1_HG002.mat.cur.20211005.simpleRepeat.bb
html html/GCA_021951015.1_HG002.mat.cur.20211005.simpleRepeat

track cpgIslands
compositeTrack on
shortLabel CpG Islands
longLabel CpG Islands (Islands < 300 Bases are Light Green)
group regulation
visibility pack
type bigBed 4 +
html html/GCA_021951015.1_HG002.mat.cur.20211005.cpgIslands

    track cpgIslandExt
    parent cpgIslands off
    shortLabel CpG Islands
    longLabel CpG Islands (Islands < 300 Bases are Light Green)
    type bigBed 4 +
    priority 1
    bigDataUrl bbi/GCA_021951015.1_HG002.mat.cur.20211005.cpgIslandExt.bb

    track cpgIslandExtUnmasked
    parent cpgIslands on
    shortLabel Unmasked CpG
    longLabel CpG Islands on All Sequence (Islands < 300 Bases are Light Green)
    type bigBed 4 +
    priority 2
    bigDataUrl bbi/GCA_021951015.1_HG002.mat.cur.20211005.cpgIslandExtUnmasked.bb

track windowMasker
shortLabel WM + SDust
longLabel Genomic Intervals Masked by WindowMasker + SDust
group varRep
visibility dense
type bigBed 3
bigDataUrl bbi/GCA_021951015.1_HG002.mat.cur.20211005.windowMasker.bb
html html/GCA_021951015.1_HG002.mat.cur.20211005.windowMasker

track allGaps
shortLabel All Gaps
longLabel All gaps of unknown nucleotides (N's), including AGP annotated gaps
group map
visibility dense
type bigBed 3
bigDataUrl bbi/GCA_021951015.1_HG002.mat.cur.20211005.allGaps.bb
html html/GCA_021951015.1_HG002.mat.cur.20211005.allGaps

track augustus
shortLabel Augustus
longLabel Augustus Gene Predictions
group genes
visibility pack
color 180,0,0
type bigGenePred
bigDataUrl bbi/GCA_021951015.1_HG002.mat.cur.20211005.augustus.bb
html html/GCA_021951015.1_HG002.mat.cur.20211005.augustus

track xenoRefGene
shortLabel RefSeq mRNAs
longLabel RefSeq mRNAs mapped to this assembly
group rna
visibility pack
color 180,0,0
type bigGenePred
bigDataUrl bbi/GCA_021951015.1_HG002.mat.cur.20211005.xenoRefGene.bb
url https://www.ncbi.nlm.nih.gov/nuccore/$$
urlLabel NCBI Nucleotide database:
labelFields name,geneName,geneName2
defaultLabelFields geneName
searchIndex name
searchTrix ixIxx/GCA_021951015.1_HG002.mat.cur.20211005.xenoRefGene.ix
html html/GCA_021951015.1_HG002.mat.cur.20211005.xenoRefGene

track ensGene
shortLabel Ensembl genes
longLabel Ensembl genes 2022_07
group genes
priority 40
visibility pack
color 150,0,0
itemRgb on
type bigGenePred
bigDataUrl bbi/GCA_021951015.1_HG002.mat.cur.20211005.ensGene.bb
searchTrix ixIxx/GCA_021951015.1_HG002.mat.cur.20211005.ensGene.ix
searchIndex name
labelFields name,name2
defaultLabelFields name2
baseColorUseCds given
baseColorDefault genomicCodons
labelSeperator " "
html html/GCA_021951015.1_HG002.mat.cur.20211005.ensGene

track GCA_021951015.1_HG002.mat.cur.20211005ChainNet
compositeTrack on
shortLabel Chain/Net
longLabel Chain and Net alignments to target sequence: GCA_021951015.1_HG002.mat.cur.20211005
subGroup1 view Views chain=Chains net=Nets
subGroup2 species Species s000=GCA_009914755.4 s001=GCA_021950905.1 s002=hg19 s003=hg38
subGroup3 clade Clade c00=human
dragAndDrop subTracks
visibility hide
group compGeno
color 0,0,0
altColor 255,255,0
type bed 3
chainLinearGap loose
chainMinScore 5000
dimensions dimensionX=clade dimensionY=species
sortOrder species=+ view=+ clade=+
configurable on
html html/GCA_021951015.1_HG002.mat.cur.20211005.chainNet

    track GCA_021951015.1_HG002.mat.cur.20211005ChainNetViewchain
    shortLabel  Chains
    view chain
    visibility pack
    subTrack GCA_021951015.1_HG002.mat.cur.20211005ChainNet
    spectrum on

        track chainGCA_009914755.4
        subTrack GCA_021951015.1_HG002.mat.cur.20211005ChainNetViewchain off
        subGroups view=chain species=s000 clade=c00
        shortLabel GCA_009914755.4 Chain
        longLabel GCA_009914755.4_T2T-CHM13v2.0 (2022-01-24) Chained Alignments
        type bigChain GCA_009914755.4
        bigDataUrl bbi/GCA_021951015.1_HG002.mat.cur.20211005.chainGCA_009914755.4.bb
        linkDataUrl bbi/GCA_021951015.1_HG002.mat.cur.20211005.chainGCA_009914755.4Link.bb
        otherDb GCA_009914755.4
        html html/GCA_021951015.1_HG002.mat.cur.20211005.chainNet
        priority 1

        track chainSynGCA_009914755.4
        subTrack GCA_021951015.1_HG002.mat.cur.20211005ChainNetViewchain off
        subGroups view=chain species=s000 clade=c00
        shortLabel GCA_009914755.4 synChain
        longLabel GCA_009914755.4_T2T-CHM13v2.0 (2022-01-24) Syntenic Chained Alignments
        type bigChain GCA_009914755.4
        bigDataUrl bbi/GCA_021951015.1_HG002.mat.cur.20211005.chainSynGCA_009914755.4.bb
        linkDataUrl bbi/GCA_021951015.1_HG002.mat.cur.20211005.chainSynGCA_009914755.4Link.bb
        otherDb GCA_009914755.4
        html html/GCA_021951015.1_HG002.mat.cur.20211005.chainNet
        priority 2

        track chainRBestGCA_009914755.4
        subTrack GCA_021951015.1_HG002.mat.cur.20211005ChainNetViewchain off
        subGroups view=chain species=s000 clade=c00
        shortLabel GCA_009914755.4 rbChain
        longLabel GCA_009914755.4_T2T-CHM13v2.0 (2022-01-24) Reciprocal Best Chained Alignments
        type bigChain GCA_009914755.4
        bigDataUrl bbi/GCA_021951015.1_HG002.mat.cur.20211005.chainRBestGCA_009914755.4.bb
        linkDataUrl bbi/GCA_021951015.1_HG002.mat.cur.20211005.chainRBestGCA_009914755.4Link.bb
        otherDb GCA_009914755.4
        html html/GCA_021951015.1_HG002.mat.cur.20211005.chainNet
        priority 3

        track chainLiftOverGCA_009914755.4
        subTrack GCA_021951015.1_HG002.mat.cur.20211005ChainNetViewchain off
        subGroups view=chain species=s000 clade=c00
        shortLabel GCA_009914755.4 loChain
        longLabel GCA_009914755.4_T2T-CHM13v2.0 (2022-01-24) Lift Over Chained Alignments
        type bigChain GCA_009914755.4
        bigDataUrl bbi/GCA_021951015.1_HG002.mat.cur.20211005.chainLiftOverGCA_009914755.4.bb
        linkDataUrl bbi/GCA_021951015.1_HG002.mat.cur.20211005.chainLiftOverGCA_009914755.4Link.bb
        otherDb GCA_009914755.4
        html html/GCA_021951015.1_HG002.mat.cur.20211005.chainNet
        priority 4

        track chainGCA_021950905.1
        subTrack GCA_021951015.1_HG002.mat.cur.20211005ChainNetViewchain off
        subGroups view=chain species=s001 clade=c00
        shortLabel GCA_021950905.1 Chain
        longLabel GCA_021950905.1_HG002.pat.cur.20211005 (2022-02-04) Chained Alignments
        type bigChain GCA_021950905.1
        bigDataUrl bbi/GCA_021951015.1_HG002.mat.cur.20211005.chainGCA_021950905.1.bb
        linkDataUrl bbi/GCA_021951015.1_HG002.mat.cur.20211005.chainGCA_021950905.1Link.bb
        otherDb GCA_021950905.1
        html html/GCA_021951015.1_HG002.mat.cur.20211005.chainNet
        priority 5

        track chainSynGCA_021950905.1
        subTrack GCA_021951015.1_HG002.mat.cur.20211005ChainNetViewchain off
        subGroups view=chain species=s001 clade=c00
        shortLabel GCA_021950905.1 synChain
        longLabel GCA_021950905.1_HG002.pat.cur.20211005 (2022-02-04) Syntenic Chained Alignments
        type bigChain GCA_021950905.1
        bigDataUrl bbi/GCA_021951015.1_HG002.mat.cur.20211005.chainSynGCA_021950905.1.bb
        linkDataUrl bbi/GCA_021951015.1_HG002.mat.cur.20211005.chainSynGCA_021950905.1Link.bb
        otherDb GCA_021950905.1
        html html/GCA_021951015.1_HG002.mat.cur.20211005.chainNet
        priority 6

        track chainRBestGCA_021950905.1
        subTrack GCA_021951015.1_HG002.mat.cur.20211005ChainNetViewchain off
        subGroups view=chain species=s001 clade=c00
        shortLabel GCA_021950905.1 rbChain
        longLabel GCA_021950905.1_HG002.pat.cur.20211005 (2022-02-04) Reciprocal Best Chained Alignments
        type bigChain GCA_021950905.1
        bigDataUrl bbi/GCA_021951015.1_HG002.mat.cur.20211005.chainRBestGCA_021950905.1.bb
        linkDataUrl bbi/GCA_021951015.1_HG002.mat.cur.20211005.chainRBestGCA_021950905.1Link.bb
        otherDb GCA_021950905.1
        html html/GCA_021951015.1_HG002.mat.cur.20211005.chainNet
        priority 7

        track chainLiftOverGCA_021950905.1
        subTrack GCA_021951015.1_HG002.mat.cur.20211005ChainNetViewchain off
        subGroups view=chain species=s001 clade=c00
        shortLabel GCA_021950905.1 loChain
        longLabel GCA_021950905.1_HG002.pat.cur.20211005 (2022-02-04) Lift Over Chained Alignments
        type bigChain GCA_021950905.1
        bigDataUrl bbi/GCA_021951015.1_HG002.mat.cur.20211005.chainLiftOverGCA_021950905.1.bb
        linkDataUrl bbi/GCA_021951015.1_HG002.mat.cur.20211005.chainLiftOverGCA_021950905.1Link.bb
        otherDb GCA_021950905.1
        html html/GCA_021951015.1_HG002.mat.cur.20211005.chainNet
        priority 8

        track chainHg19
        subTrack GCA_021951015.1_HG002.mat.cur.20211005ChainNetViewchain off
        subGroups view=chain species=s002 clade=c00
        shortLabel hg19 Chain
        longLabel hg19 (Feb. 2009) Chained Alignments
        type bigChain hg19
        bigDataUrl bbi/GCA_021951015.1_HG002.mat.cur.20211005.chainHg19.bb
        linkDataUrl bbi/GCA_021951015.1_HG002.mat.cur.20211005.chainHg19Link.bb
        otherDb hg19
        html html/GCA_021951015.1_HG002.mat.cur.20211005.chainNet
        priority 9

        track chainSynHg19
        subTrack GCA_021951015.1_HG002.mat.cur.20211005ChainNetViewchain off
        subGroups view=chain species=s002 clade=c00
        shortLabel hg19 synChain
        longLabel hg19 (Feb. 2009) Syntenic Chained Alignments
        type bigChain hg19
        bigDataUrl bbi/GCA_021951015.1_HG002.mat.cur.20211005.chainSynHg19.bb
        linkDataUrl bbi/GCA_021951015.1_HG002.mat.cur.20211005.chainSynHg19Link.bb
        otherDb hg19
        html html/GCA_021951015.1_HG002.mat.cur.20211005.chainNet
        priority 10

        track chainRBestHg19
        subTrack GCA_021951015.1_HG002.mat.cur.20211005ChainNetViewchain off
        subGroups view=chain species=s002 clade=c00
        shortLabel hg19 rbChain
        longLabel hg19 (Feb. 2009) Reciprocal Best Chained Alignments
        type bigChain hg19
        bigDataUrl bbi/GCA_021951015.1_HG002.mat.cur.20211005.chainRBestHg19.bb
        linkDataUrl bbi/GCA_021951015.1_HG002.mat.cur.20211005.chainRBestHg19Link.bb
        otherDb hg19
        html html/GCA_021951015.1_HG002.mat.cur.20211005.chainNet
        priority 11

        track chainLiftOverHg19
        subTrack GCA_021951015.1_HG002.mat.cur.20211005ChainNetViewchain off
        subGroups view=chain species=s002 clade=c00
        shortLabel hg19 loChain
        longLabel hg19 (Feb. 2009) Lift Over Chained Alignments
        type bigChain hg19
        bigDataUrl bbi/GCA_021951015.1_HG002.mat.cur.20211005.chainLiftOverHg19.bb
        linkDataUrl bbi/GCA_021951015.1_HG002.mat.cur.20211005.chainLiftOverHg19Link.bb
        otherDb hg19
        html html/GCA_021951015.1_HG002.mat.cur.20211005.chainNet
        priority 12

        track chainHg38
        subTrack GCA_021951015.1_HG002.mat.cur.20211005ChainNetViewchain off
        subGroups view=chain species=s003 clade=c00
        shortLabel hg38 Chain
        longLabel hg38 (Dec. 2013) Chained Alignments
        type bigChain hg38
        bigDataUrl bbi/GCA_021951015.1_HG002.mat.cur.20211005.chainHg38.bb
        linkDataUrl bbi/GCA_021951015.1_HG002.mat.cur.20211005.chainHg38Link.bb
        otherDb hg38
        html html/GCA_021951015.1_HG002.mat.cur.20211005.chainNet
        priority 13

        track chainSynHg38
        subTrack GCA_021951015.1_HG002.mat.cur.20211005ChainNetViewchain off
        subGroups view=chain species=s003 clade=c00
        shortLabel hg38 synChain
        longLabel hg38 (Dec. 2013) Syntenic Chained Alignments
        type bigChain hg38
        bigDataUrl bbi/GCA_021951015.1_HG002.mat.cur.20211005.chainSynHg38.bb
        linkDataUrl bbi/GCA_021951015.1_HG002.mat.cur.20211005.chainSynHg38Link.bb
        otherDb hg38
        html html/GCA_021951015.1_HG002.mat.cur.20211005.chainNet
        priority 14

        track chainRBestHg38
        subTrack GCA_021951015.1_HG002.mat.cur.20211005ChainNetViewchain off
        subGroups view=chain species=s003 clade=c00
        shortLabel hg38 rbChain
        longLabel hg38 (Dec. 2013) Reciprocal Best Chained Alignments
        type bigChain hg38
        bigDataUrl bbi/GCA_021951015.1_HG002.mat.cur.20211005.chainRBestHg38.bb
        linkDataUrl bbi/GCA_021951015.1_HG002.mat.cur.20211005.chainRBestHg38Link.bb
        otherDb hg38
        html html/GCA_021951015.1_HG002.mat.cur.20211005.chainNet
        priority 15

        track chainLiftOverHg38
        subTrack GCA_021951015.1_HG002.mat.cur.20211005ChainNetViewchain off
        subGroups view=chain species=s003 clade=c00
        shortLabel hg38 loChain
        longLabel hg38 (Dec. 2013) Lift Over Chained Alignments
        type bigChain hg38
        bigDataUrl bbi/GCA_021951015.1_HG002.mat.cur.20211005.chainLiftOverHg38.bb
        linkDataUrl bbi/GCA_021951015.1_HG002.mat.cur.20211005.chainLiftOverHg38Link.bb
        otherDb hg38
        html html/GCA_021951015.1_HG002.mat.cur.20211005.chainNet
        priority 16

    track GCA_021951015.1_HG002.mat.cur.20211005MafNetViewnet
    shortLabel Nets
    view net
    visibility dense
    subTrack GCA_021951015.1_HG002.mat.cur.20211005ChainNet

        track synNetGCA_009914755.4
        parent GCA_021951015.1_HG002.mat.cur.20211005MafNetViewnet
        subGroups view=net species=s000 clade=c00
        shortLabel GCA_009914755.4 synNet
        longLabel GCA_009914755.4 (some date) Syntenic Net Alignment
        type bigMaf
        bigDataUrl bbi/GCA_021951015.1_HG002.mat.cur.20211005.GCA_009914755.4.synNet.bb
        summary bbi/GCA_021951015.1_HG002.mat.cur.20211005.GCA_009914755.4.synNet.summary.bb
        speciesOrder GCA_009914755.4
        html html/GCA_021951015.1_HG002.mat.cur.20211005.chainNet
        priority 1

        track rbestNetGCA_009914755.4
        parent GCA_021951015.1_HG002.mat.cur.20211005MafNetViewnet
        subGroups view=net species=s000 clade=c00
        shortLabel GCA_009914755.4 rbestNet
        longLabel GCA_009914755.4 (some date) Reciprocal Best Net Alignment
        type bigMaf
        bigDataUrl bbi/GCA_021951015.1_HG002.mat.cur.20211005.GCA_009914755.4.rbestNet.bb
        summary bbi/GCA_021951015.1_HG002.mat.cur.20211005.GCA_009914755.4.rbestNet.summary.bb
        speciesOrder GCA_009914755.4
        html html/GCA_021951015.1_HG002.mat.cur.20211005.chainNet
        priority 2

        track liftOverNetGCA_009914755.4
        parent GCA_021951015.1_HG002.mat.cur.20211005MafNetViewnet
        subGroups view=net species=s000 clade=c00
        shortLabel GCA_009914755.4 liftOverNet
        longLabel GCA_009914755.4 (some date) Lift Over Net Alignment
        type bigMaf
        bigDataUrl bbi/GCA_021951015.1_HG002.mat.cur.20211005.GCA_009914755.4.liftOverNet.bb
        summary bbi/GCA_021951015.1_HG002.mat.cur.20211005.GCA_009914755.4.liftOverNet.summary.bb
        speciesOrder GCA_009914755.4
        html html/GCA_021951015.1_HG002.mat.cur.20211005.chainNet
        priority 3

        track synNetGCA_021950905.1
        parent GCA_021951015.1_HG002.mat.cur.20211005MafNetViewnet
        subGroups view=net species=s001 clade=c00
        shortLabel GCA_021950905.1 synNet
        longLabel GCA_021950905.1 (some date) Syntenic Net Alignment
        type bigMaf
        bigDataUrl bbi/GCA_021951015.1_HG002.mat.cur.20211005.GCA_021950905.1.synNet.bb
        summary bbi/GCA_021951015.1_HG002.mat.cur.20211005.GCA_021950905.1.synNet.summary.bb
        speciesOrder GCA_021950905.1
        html html/GCA_021951015.1_HG002.mat.cur.20211005.chainNet
        priority 4

        track rbestNetGCA_021950905.1
        parent GCA_021951015.1_HG002.mat.cur.20211005MafNetViewnet
        subGroups view=net species=s001 clade=c00
        shortLabel GCA_021950905.1 rbestNet
        longLabel GCA_021950905.1 (some date) Reciprocal Best Net Alignment
        type bigMaf
        bigDataUrl bbi/GCA_021951015.1_HG002.mat.cur.20211005.GCA_021950905.1.rbestNet.bb
        summary bbi/GCA_021951015.1_HG002.mat.cur.20211005.GCA_021950905.1.rbestNet.summary.bb
        speciesOrder GCA_021950905.1
        html html/GCA_021951015.1_HG002.mat.cur.20211005.chainNet
        priority 5

        track liftOverNetGCA_021950905.1
        parent GCA_021951015.1_HG002.mat.cur.20211005MafNetViewnet
        subGroups view=net species=s001 clade=c00
        shortLabel GCA_021950905.1 liftOverNet
        longLabel GCA_021950905.1 (some date) Lift Over Net Alignment
        type bigMaf
        bigDataUrl bbi/GCA_021951015.1_HG002.mat.cur.20211005.GCA_021950905.1.liftOverNet.bb
        summary bbi/GCA_021951015.1_HG002.mat.cur.20211005.GCA_021950905.1.liftOverNet.summary.bb
        speciesOrder GCA_021950905.1
        html html/GCA_021951015.1_HG002.mat.cur.20211005.chainNet
        priority 6

        track synNetHg19
        parent GCA_021951015.1_HG002.mat.cur.20211005MafNetViewnet
        subGroups view=net species=s002 clade=c00
        shortLabel hg19 synNet
        longLabel hg19 (some date) Syntenic Net Alignment
        type bigMaf
        bigDataUrl bbi/GCA_021951015.1_HG002.mat.cur.20211005.hg19.synNet.bb
        summary bbi/GCA_021951015.1_HG002.mat.cur.20211005.hg19.synNet.summary.bb
        speciesOrder hg19
        html html/GCA_021951015.1_HG002.mat.cur.20211005.chainNet
        priority 7

        track rbestNetHg19
        parent GCA_021951015.1_HG002.mat.cur.20211005MafNetViewnet
        subGroups view=net species=s002 clade=c00
        shortLabel hg19 rbestNet
        longLabel hg19 (some date) Reciprocal Best Net Alignment
        type bigMaf
        bigDataUrl bbi/GCA_021951015.1_HG002.mat.cur.20211005.hg19.rbestNet.bb
        summary bbi/GCA_021951015.1_HG002.mat.cur.20211005.hg19.rbestNet.summary.bb
        speciesOrder hg19
        html html/GCA_021951015.1_HG002.mat.cur.20211005.chainNet
        priority 8

        track liftOverNetHg19
        parent GCA_021951015.1_HG002.mat.cur.20211005MafNetViewnet
        subGroups view=net species=s002 clade=c00
        shortLabel hg19 liftOverNet
        longLabel hg19 (some date) Lift Over Net Alignment
        type bigMaf
        bigDataUrl bbi/GCA_021951015.1_HG002.mat.cur.20211005.hg19.liftOverNet.bb
        summary bbi/GCA_021951015.1_HG002.mat.cur.20211005.hg19.liftOverNet.summary.bb
        speciesOrder hg19
        html html/GCA_021951015.1_HG002.mat.cur.20211005.chainNet
        priority 9

        track synNetHg38
        parent GCA_021951015.1_HG002.mat.cur.20211005MafNetViewnet
        subGroups view=net species=s003 clade=c00
        shortLabel hg38 synNet
        longLabel hg38 (some date) Syntenic Net Alignment
        type bigMaf
        bigDataUrl bbi/GCA_021951015.1_HG002.mat.cur.20211005.hg38.synNet.bb
        summary bbi/GCA_021951015.1_HG002.mat.cur.20211005.hg38.synNet.summary.bb
        speciesOrder hg38
        html html/GCA_021951015.1_HG002.mat.cur.20211005.chainNet
        priority 10

        track rbestNetHg38
        parent GCA_021951015.1_HG002.mat.cur.20211005MafNetViewnet
        subGroups view=net species=s003 clade=c00
        shortLabel hg38 rbestNet
        longLabel hg38 (some date) Reciprocal Best Net Alignment
        type bigMaf
        bigDataUrl bbi/GCA_021951015.1_HG002.mat.cur.20211005.hg38.rbestNet.bb
        summary bbi/GCA_021951015.1_HG002.mat.cur.20211005.hg38.rbestNet.summary.bb
        speciesOrder hg38
        html html/GCA_021951015.1_HG002.mat.cur.20211005.chainNet
        priority 11

        track liftOverNetHg38
        parent GCA_021951015.1_HG002.mat.cur.20211005MafNetViewnet
        subGroups view=net species=s003 clade=c00
        shortLabel hg38 liftOverNet
        longLabel hg38 (some date) Lift Over Net Alignment
        type bigMaf
        bigDataUrl bbi/GCA_021951015.1_HG002.mat.cur.20211005.hg38.liftOverNet.bb
        summary bbi/GCA_021951015.1_HG002.mat.cur.20211005.hg38.liftOverNet.summary.bb
        speciesOrder hg38
        html html/GCA_021951015.1_HG002.mat.cur.20211005.chainNet
        priority 12